RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 GNL2Q13823 731 aaKnown RBP19.19■□□□□ 0.66
SHROOM4-201ENST00000289292 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
SHROOM4-201ENST00000289292 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
SHROOM4-201ENST00000289292 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
SHROOM4-201ENST00000289292 HSP90B1P14625 803 aaKnown RBP19.15■□□□□ 0.66
SHROOM4-201ENST00000289292 TNNT3P45378 269 aaPredicted RBP19.14■□□□□ 0.65
SHROOM4-201ENST00000289292 DDX11L8A8MPP1 907 aa19.13■□□□□ 0.65
SHROOM4-201ENST00000289292 EIF3AQ14152 1382 aaKnown RBP19.13■□□□□ 0.65
SHROOM4-201ENST00000289292 USP47Q96K76 1375 aa19.13■□□□□ 0.65
SHROOM4-201ENST00000289292 NPHP1O15259 732 aa19.13■□□□□ 0.65
SHROOM4-201ENST00000289292 ELL2O00472 640 aaPredicted RBP19.12■□□□□ 0.65
SHROOM4-201ENST00000289292 ANKRD45Q5TZF3 282 aa19.11■□□□□ 0.65
SHROOM4-201ENST00000289292 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
SHROOM4-201ENST00000289292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
SHROOM4-201ENST00000289292 DDX49Q9Y6V7 483 aaKnown RBP19.1■□□□□ 0.65
SHROOM4-201ENST00000289292 ANO8Q9HCE9 1232 aaPredicted RBP19.1■□□□□ 0.65
SHROOM4-201ENST00000289292 PHLDB1Q86UU1 1377 aa19.1■□□□□ 0.65
SHROOM4-201ENST00000289292 TRAK1Q9UPV9 953 aa19.09■□□□□ 0.65
SHROOM4-201ENST00000289292 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
SHROOM4-201ENST00000289292 ST18O60284 1047 aa19.06■□□□□ 0.64
SHROOM4-201ENST00000289292 APAF1O14727 1248 aa19.06■□□□□ 0.64
SHROOM4-201ENST00000289292 KIF3BO15066 747 aa19.05■□□□□ 0.64
SHROOM4-201ENST00000289292 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
SHROOM4-201ENST00000289292 RILPL2Q969X0 211 aa19.05■□□□□ 0.64
SHROOM4-201ENST00000289292 STK31Q9BXU1 1019 aa19.05■□□□□ 0.64
SHROOM4-201ENST00000289292 CHMP3Q9Y3E7 222 aa19.04■□□□□ 0.64
SHROOM4-201ENST00000289292 NFKBIBQ15653 356 aa19.03■□□□□ 0.64
SHROOM4-201ENST00000289292 E9PSI1 815 aa19.02■□□□□ 0.64
SHROOM4-201ENST00000289292 HMMRO75330 724 aa19.02■□□□□ 0.64
SHROOM4-201ENST00000289292 ISY1Q9ULR0 285 aaKnown RBP19.02■□□□□ 0.64
SHROOM4-201ENST00000289292 IL27Q8NEV9 243 aa19.01■□□□□ 0.63
SHROOM4-201ENST00000289292 CARMIL2Q6F5E8 1435 aa19.01■□□□□ 0.63
SHROOM4-201ENST00000289292 KIF7Q2M1P5 1343 aa19.01■□□□□ 0.63
SHROOM4-201ENST00000289292 SPAG9O60271 1321 aaKnown RBP19.01■□□□□ 0.63
SHROOM4-201ENST00000289292 CLSTN1O94985 981 aa19.01■□□□□ 0.63
SHROOM4-201ENST00000289292 NUTM2FA1L443 756 aa19■□□□□ 0.63
SHROOM4-201ENST00000289292 CCDC9Q9Y3X0 531 aaKnown RBP19■□□□□ 0.63
SHROOM4-201ENST00000289292 ZKSCAN2Q63HK3 967 aa19■□□□□ 0.63
SHROOM4-201ENST00000289292 CREBRFQ8IUR6 639 aa19■□□□□ 0.63
SHROOM4-201ENST00000289292 CCDC7Q96M83 1385 aa19■□□□□ 0.63
SHROOM4-201ENST00000289292 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
SHROOM4-201ENST00000289292 HTATSF1O43719 755 aaKnown RBP18.99■□□□□ 0.63
SHROOM4-201ENST00000289292 FAM13BQ9NYF5 915 aa18.99■□□□□ 0.63
SHROOM4-201ENST00000289292 PHF14O94880 888 aa18.99■□□□□ 0.63
SHROOM4-201ENST00000289292 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.99■□□□□ 0.63
SHROOM4-201ENST00000289292 BRPF3Q9ULD4 1205 aa18.99■□□□□ 0.63
SHROOM4-201ENST00000289292 CNTLNQ9NXG0 1405 aa18.99■□□□□ 0.63
SHROOM4-201ENST00000289292 TPM4P67936 248 aa18.98■□□□□ 0.63
SHROOM4-201ENST00000289292 TERF2IPQ9NYB0 399 aa18.98■□□□□ 0.63
SHROOM4-201ENST00000289292 LTV1Q96GA3 475 aaPredicted RBP18.97■□□□□ 0.63
SHROOM4-201ENST00000289292 GPATCH3Q96I76 525 aa18.97■□□□□ 0.63
SHROOM4-201ENST00000289292 KIF16BQ96L93 1317 aa18.97■□□□□ 0.63
SHROOM4-201ENST00000289292 CSPP1Q1MSJ5 1256 aa18.97■□□□□ 0.63
SHROOM4-201ENST00000289292 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
SHROOM4-201ENST00000289292 PANK1Q8TE04 598 aa18.95■□□□□ 0.62
SHROOM4-201ENST00000289292 SKOR2Q2VWA4 1001 aaPredicted RBP18.95■□□□□ 0.62
SHROOM4-201ENST00000289292 BCL11BQ9C0K0 894 aaPredicted RBP18.95■□□□□ 0.62
SHROOM4-201ENST00000289292 KIF21BO75037 1637 aa18.94■□□□□ 0.62
SHROOM4-201ENST00000289292 EFCAB2Q5VUJ9 269 aa18.94■□□□□ 0.62
SHROOM4-201ENST00000289292 CDCA7LQ96GN5 454 aa18.94■□□□□ 0.62
SHROOM4-201ENST00000289292 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
SHROOM4-201ENST00000289292 GORABQ5T7V8 394 aa18.93■□□□□ 0.62
SHROOM4-201ENST00000289292 ZNF592Q92610 1267 aa18.93■□□□□ 0.62
SHROOM4-201ENST00000289292 AKNAQ7Z591 1439 aa18.93■□□□□ 0.62
SHROOM4-201ENST00000289292 ZNF771Q7L3S4 317 aaPredicted RBP18.92■□□□□ 0.62
SHROOM4-201ENST00000289292 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
SHROOM4-201ENST00000289292 MCTP1Q6DN14 999 aa18.92■□□□□ 0.62
SHROOM4-201ENST00000289292 SMARCA4P51532 1647 aa18.91■□□□□ 0.62
SHROOM4-201ENST00000289292 CHMP5Q9NZZ3 219 aa18.91■□□□□ 0.62
SHROOM4-201ENST00000289292 CSB-PGBD3P0DP91 1061 aa18.9■□□□□ 0.62
SHROOM4-201ENST00000289292 NOC3LQ8WTT2 800 aaKnown RBP18.9■□□□□ 0.62
SHROOM4-201ENST00000289292 NECTIN2Q92692 538 aa18.9■□□□□ 0.62
SHROOM4-201ENST00000289292 H3BQV1 296 aa18.88■□□□□ 0.61
SHROOM4-201ENST00000289292 PDE4CQ08493 712 aa18.88■□□□□ 0.61
SHROOM4-201ENST00000289292 IFFO2Q5TF58 517 aa18.88■□□□□ 0.61
SHROOM4-201ENST00000289292 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
SHROOM4-201ENST00000289292 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
SHROOM4-201ENST00000289292 LNPKQ9C0E8 428 aa18.88■□□□□ 0.61
SHROOM4-201ENST00000289292 FRAT2O75474 233 aaPredicted RBP18.87■□□□□ 0.61
SHROOM4-201ENST00000289292 AMPHP49418 695 aa18.87■□□□□ 0.61
SHROOM4-201ENST00000289292 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
SHROOM4-201ENST00000289292 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
SHROOM4-201ENST00000289292 ZNF644Q9H582 1327 aaPredicted RBP18.86■□□□□ 0.61
SHROOM4-201ENST00000289292 SF3A1Q15459 793 aaKnown RBP18.86■□□□□ 0.61
SHROOM4-201ENST00000289292 GOLGA6L1Q8N7Z2 621 aa18.86■□□□□ 0.61
SHROOM4-201ENST00000289292 CCAR2Q8N163 923 aaKnown RBP18.86■□□□□ 0.61
SHROOM4-201ENST00000289292 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
SHROOM4-201ENST00000289292 TAF7LQ5H9L4 462 aa18.85■□□□□ 0.61
SHROOM4-201ENST00000289292 DDX19BQ9UMR2 479 aa18.85■□□□□ 0.61
SHROOM4-201ENST00000289292 FAM43AQ8N2R8 423 aa18.85■□□□□ 0.61
SHROOM4-201ENST00000289292 FBXW7Q969H0 707 aa18.84■□□□□ 0.61
SHROOM4-201ENST00000289292 RIPK4P57078 832 aa18.84■□□□□ 0.61
SHROOM4-201ENST00000289292 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.61
SHROOM4-201ENST00000289292 ADAMTS8Q9UP79 889 aa18.83■□□□□ 0.61
SHROOM4-201ENST00000289292 GOLGA6L19H0YKK7 550 aa18.83■□□□□ 0.6
SHROOM4-201ENST00000289292 TOMM22Q9NS69 142 aa18.83■□□□□ 0.6
SHROOM4-201ENST00000289292 MINK1Q8N4C8 1332 aaPredicted RBP18.82■□□□□ 0.6
SHROOM4-201ENST00000289292 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
SHROOM4-201ENST00000289292 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
SHROOM4-201ENST00000289292 RASSF8Q8NHQ8 419 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms