RNA–Protein interactions for RNA: ENST00000289228.6

ACTR1B-201, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1B, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-201ENST00000289228 PNISRQ8TF01 805 aaKnown RBP30.65■■■□□ 2.5
ACTR1B-201ENST00000289228 TMC1Q8TDI8 760 aa30.65■■■□□ 2.5
ACTR1B-201ENST00000289228 MSH5O43196 834 aa30.63■■■□□ 2.49
ACTR1B-201ENST00000289228 KTN1Q86UP2 1357 aaKnown RBP30.59■■■□□ 2.49
ACTR1B-201ENST00000289228 E9PCH4 1651 aa30.58■■■□□ 2.49
ACTR1B-201ENST00000289228 CCDC144AA2RUR9 1427 aa30.58■■■□□ 2.49
ACTR1B-201ENST00000289228 SYCP2Q9BX26 1530 aa30.58■■■□□ 2.49
ACTR1B-201ENST00000289228 MAST1Q9Y2H9 1570 aa30.56■■■□□ 2.48
ACTR1B-201ENST00000289228 RALBP1Q15311 655 aa30.56■■■□□ 2.48
ACTR1B-201ENST00000289228 RNF123Q5XPI4 1314 aa30.56■■■□□ 2.48
ACTR1B-201ENST00000289228 TRPM1Q7Z4N2 1603 aa30.56■■■□□ 2.48
ACTR1B-201ENST00000289228 MYBBP1AQ9BQG0 1328 aaKnown RBP30.55■■■□□ 2.48
ACTR1B-201ENST00000289228 BRD4O60885 1362 aaPredicted RBP30.55■■■□□ 2.48
ACTR1B-201ENST00000289228 PRAG1Q86YV5 1406 aa30.55■■■□□ 2.48
ACTR1B-201ENST00000289228 ARHGAP5Q13017 1502 aa30.55■■■□□ 2.48
ACTR1B-201ENST00000289228 UNC13BO14795 1591 aa30.55■■■□□ 2.48
ACTR1B-201ENST00000289228 TTC37Q6PGP7 1564 aa30.53■■■□□ 2.48
ACTR1B-201ENST00000289228 LRPPRCP42704 1394 aaKnown RBP30.53■■■□□ 2.48
ACTR1B-201ENST00000289228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.5■■■□□ 2.47
ACTR1B-201ENST00000289228 CHD1O14646 1710 aa30.5■■■□□ 2.47
ACTR1B-201ENST00000289228 SENP3-EIF4A1A0A087X0R7 540 aa30.48■■■□□ 2.47
ACTR1B-201ENST00000289228 RGL3Q3MIN7 710 aa30.47■■■□□ 2.47
ACTR1B-201ENST00000289228 PLA2R1Q13018 1463 aa30.47■■■□□ 2.47
ACTR1B-201ENST00000289228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.47■■■□□ 2.472e-7■■□□□ 12.7
ACTR1B-201ENST00000289228 PLXNC1O60486 1568 aa30.45■■■□□ 2.47
ACTR1B-201ENST00000289228 SHROOM2Q13796 1616 aa30.44■■■□□ 2.46
ACTR1B-201ENST00000289228 A2MP01023 1474 aa30.44■■■□□ 2.46
ACTR1B-201ENST00000289228 IQGAP3Q86VI3 1631 aa30.43■■■□□ 2.46
ACTR1B-201ENST00000289228 PLEKHH2Q8IVE3 1493 aa30.43■■■□□ 2.46
ACTR1B-201ENST00000289228 MYO5CQ9NQX4 1742 aa30.43■■■□□ 2.46
ACTR1B-201ENST00000289228 NBPF1Q3BBV0 1214 aa30.43■■■□□ 2.46
ACTR1B-201ENST00000289228 GPRASP1Q5JY77 1395 aa30.43■■■□□ 2.46
ACTR1B-201ENST00000289228 LAMC1P11047 1609 aa30.4■■■□□ 2.46
ACTR1B-201ENST00000289228 ERICH6Q7L0X2 663 aa30.4■■■□□ 2.46
ACTR1B-201ENST00000289228 CCDC136Q96JN2 1154 aa30.39■■■□□ 2.46
ACTR1B-201ENST00000289228 ABCC2Q92887 1545 aa30.39■■■□□ 2.46
ACTR1B-201ENST00000289228 PARD3Q8TEW0 1356 aa30.39■■■□□ 2.46
ACTR1B-201ENST00000289228 NLRP13Q86W25 1043 aa30.38■■■□□ 2.45
ACTR1B-201ENST00000289228 DUOX2Q9NRD8 1548 aa30.37■■■□□ 2.45
ACTR1B-201ENST00000289228 PRDM15P57071 1507 aaPredicted RBP30.37■■■□□ 2.45
ACTR1B-201ENST00000289228 COL17A1Q9UMD9 1497 aaPredicted RBP30.35■■■□□ 2.45
ACTR1B-201ENST00000289228 EIF2AK4Q9P2K8 1649 aaKnown RBP30.34■■■□□ 2.45
ACTR1B-201ENST00000289228 PER1O15534 1290 aaPredicted RBP30.33■■■□□ 2.45
ACTR1B-201ENST00000289228 ERCC6L2Q5T890 1561 aa30.32■■■□□ 2.44
ACTR1B-201ENST00000289228 ERBINQ96RT1 1412 aa30.32■■■□□ 2.44
ACTR1B-201ENST00000289228 ATP10AO60312 1499 aa30.31■■■□□ 2.44
ACTR1B-201ENST00000289228 MAGI2Q86UL8 1455 aa30.31■■■□□ 2.44
ACTR1B-201ENST00000289228 TESK2Q96S53 571 aa30.3■■■□□ 2.44
ACTR1B-201ENST00000289228 DISP3Q9P2K9 1392 aa30.29■■■□□ 2.44
ACTR1B-201ENST00000289228 WASHC2CQ9Y4E1 1318 aa30.27■■■□□ 2.44
ACTR1B-201ENST00000289228 PLCH2O75038 1416 aa30.26■■■□□ 2.43
ACTR1B-201ENST00000289228 RRP1P56182 461 aaKnown RBP30.23■■■□□ 2.43
ACTR1B-201ENST00000289228 PDE3BQ13370 1112 aa30.23■■■□□ 2.43
ACTR1B-201ENST00000289228 TMF1P82094 1093 aa30.22■■■□□ 2.43
ACTR1B-201ENST00000289228 EFCAB2Q5VUJ9 269 aa30.22■■■□□ 2.43
ACTR1B-201ENST00000289228 SALL2Q9Y467 1007 aaPredicted RBP30.22■■■□□ 2.43
ACTR1B-201ENST00000289228 CC2D1BQ5T0F9 858 aaKnown RBP30.22■■■□□ 2.43
ACTR1B-201ENST00000289228 PANK3Q9H999 370 aa30.21■■■□□ 2.43
ACTR1B-201ENST00000289228 RCAN3Q9UKA8 241 aa30.2■■■□□ 2.43
ACTR1B-201ENST00000289228 ZCCHC11Q5TAX3 1644 aaKnown RBP30.2■■■□□ 2.42
ACTR1B-201ENST00000289228 ABCC1P33527 1531 aa30.19■■■□□ 2.42
ACTR1B-201ENST00000289228 RNF17Q9BXT8 1623 aaKnown RBP30.19■■■□□ 2.42
ACTR1B-201ENST00000289228 INSRP06213 1382 aa30.15■■■□□ 2.42
ACTR1B-201ENST00000289228 TRAPPC8Q9Y2L5 1435 aa30.15■■■□□ 2.42
ACTR1B-201ENST00000289228 ZMYM4Q5VZL5 1548 aa30.13■■■□□ 2.41
ACTR1B-201ENST00000289228 BLMP54132 1417 aaPredicted RBP30.12■■■□□ 2.41
ACTR1B-201ENST00000289228 EXOC6Q8TAG9 804 aa30.12■■■□□ 2.41
ACTR1B-201ENST00000289228 UHRF1BP1LA0JNW5 1464 aa30.12■■■□□ 2.41
ACTR1B-201ENST00000289228 MADDQ8WXG6 1647 aa30.09■■■□□ 2.41
ACTR1B-201ENST00000289228 CDCA7LQ96GN5 454 aa30.08■■■□□ 2.41
ACTR1B-201ENST00000289228 SPAG9O60271 1321 aaKnown RBP30.07■■■□□ 2.4
ACTR1B-201ENST00000289228 NOP58Q9Y2X3 529 aaKnown RBP30.07■■■□□ 2.4
ACTR1B-201ENST00000289228 TRPM2O94759 1503 aa30.05■■■□□ 2.4
ACTR1B-201ENST00000289228 IQGAP1P46940 1657 aa30.04■■■□□ 2.4
ACTR1B-201ENST00000289228 RTEL1-TNFRSF6BF6WH68 1400 aa30.04■■■□□ 2.4
ACTR1B-201ENST00000289228 CLASP1Q7Z460 1538 aa30.02■■■□□ 2.4
ACTR1B-201ENST00000289228 WDR7Q9Y4E6 1490 aa30.02■■■□□ 2.4
ACTR1B-201ENST00000289228 ANP32AP39687 249 aaKnown RBP30.02■■■□□ 2.4
ACTR1B-201ENST00000289228 CEP152O94986 1710 aa30.01■■■□□ 2.4
ACTR1B-201ENST00000289228 SPHKAPQ2M3C7 1700 aa30.01■■■□□ 2.4
ACTR1B-201ENST00000289228 ZFYVE16Q7Z3T8 1539 aa30.01■■■□□ 2.39
ACTR1B-201ENST00000289228 AFAP1Q8N556 730 aa30■■■□□ 2.39
ACTR1B-201ENST00000289228 STAC3Q96MF2 364 aa29.99■■■□□ 2.39
ACTR1B-201ENST00000289228 ARAP3Q8WWN8 1544 aa29.99■■■□□ 2.39
ACTR1B-201ENST00000289228 PTPRTO14522 1441 aa29.98■■■□□ 2.39
ACTR1B-201ENST00000289228 KNSTRNQ9Y448 316 aa29.98■■■□□ 2.39
ACTR1B-201ENST00000289228 CLTCL1P53675 1640 aa29.97■■■□□ 2.39
ACTR1B-201ENST00000289228 SCAF11Q99590 1463 aaKnown RBP29.96■■■□□ 2.39
ACTR1B-201ENST00000289228 SCAPERQ9BY12 1400 aa29.96■■■□□ 2.39
ACTR1B-201ENST00000289228 DEPDC5O75140 1603 aa29.96■■■□□ 2.39
ACTR1B-201ENST00000289228 CDCA8Q53HL2 280 aa29.95■■■□□ 2.39
ACTR1B-201ENST00000289228 IPO9Q96P70 1041 aaKnown RBP29.95■■■□□ 2.39
ACTR1B-201ENST00000289228 PAK3O75914 559 aaPredicted RBP29.95■■■□□ 2.38
ACTR1B-201ENST00000289228 TCERG1O14776 1098 aaKnown RBP29.94■■■□□ 2.38
ACTR1B-201ENST00000289228 MYT1LQ9UL68 1186 aa29.94■■■□□ 2.38
ACTR1B-201ENST00000289228 ADAMTS8Q9UP79 889 aa29.94■■■□□ 2.38
ACTR1B-201ENST00000289228 TET3O43151 1660 aa29.93■■■□□ 2.38
ACTR1B-201ENST00000289228 SYNMO15061 1565 aa29.93■■■□□ 2.38
ACTR1B-201ENST00000289228 PPP2R1AP30153 589 aa29.92■■■□□ 2.38
ACTR1B-201ENST00000289228 PLIN1O60240 522 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms