RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 RIMS1Q86UR5 1692 aaKnown RBP29■■■□□ 2.23
KRTCAP3-201ENST00000288873 ESF1Q9H501 851 aaKnown RBP29■■■□□ 2.23
KRTCAP3-201ENST00000288873 GCC2Q8IWJ2 1684 aa28.99■■■□□ 2.23
KRTCAP3-201ENST00000288873 HFM1A2PYH4 1435 aa28.99■■■□□ 2.23
KRTCAP3-201ENST00000288873 PPP6R1Q9UPN7 881 aa28.98■■■□□ 2.23
KRTCAP3-201ENST00000288873 DEPDC5O75140 1603 aa28.96■■■□□ 2.23
KRTCAP3-201ENST00000288873 MROH1Q8NDA8 1641 aa28.96■■■□□ 2.23
KRTCAP3-201ENST00000288873 PTPRMP28827 1452 aa28.96■■■□□ 2.23
KRTCAP3-201ENST00000288873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.95■■■□□ 2.22
KRTCAP3-201ENST00000288873 CLTCQ00610 1675 aaKnown RBP28.94■■■□□ 2.22
KRTCAP3-201ENST00000288873 CNTLNQ9NXG0 1405 aa28.93■■■□□ 2.22
KRTCAP3-201ENST00000288873 PRDM15P57071 1507 aaPredicted RBP28.92■■■□□ 2.22
KRTCAP3-201ENST00000288873 WASHC2CQ9Y4E1 1318 aa28.92■■■□□ 2.22
KRTCAP3-201ENST00000288873 KDM5DQ9BY66 1539 aa28.9■■■□□ 2.22
KRTCAP3-201ENST00000288873 FAM135AQ9P2D6 1515 aa28.89■■■□□ 2.22
KRTCAP3-201ENST00000288873 KANK1Q14678 1352 aa28.89■■■□□ 2.22
KRTCAP3-201ENST00000288873 TRIM26Q12899 539 aaPredicted RBP28.89■■■□□ 2.22
KRTCAP3-201ENST00000288873 ILDR1Q86SU0 546 aaPredicted RBP28.89■■■□□ 2.22
KRTCAP3-201ENST00000288873 MROH2AA6NES4 1674 aa28.88■■■□□ 2.21
KRTCAP3-201ENST00000288873 UNC13BO14795 1591 aa28.88■■■□□ 2.21
KRTCAP3-201ENST00000288873 PLPPR3Q6T4P5 718 aa28.87■■■□□ 2.21
KRTCAP3-201ENST00000288873 ABCC3O15438 1527 aa28.87■■■□□ 2.21
KRTCAP3-201ENST00000288873 ZC3H13Q5T200 1668 aaKnown RBP28.86■■■□□ 2.21
KRTCAP3-201ENST00000288873 CEP152O94986 1710 aa28.86■■■□□ 2.21
KRTCAP3-201ENST00000288873 SETD5Q9C0A6 1442 aa28.85■■■□□ 2.21
KRTCAP3-201ENST00000288873 CEBPAP49715 358 aaPredicted RBP28.84■■■□□ 2.21
KRTCAP3-201ENST00000288873 ZMYM3Q14202 1370 aa28.84■■■□□ 2.21
KRTCAP3-201ENST00000288873 VWDEQ8N2E2 1590 aa28.84■■■□□ 2.21
KRTCAP3-201ENST00000288873 C3P01024 1663 aa28.83■■■□□ 2.21
KRTCAP3-201ENST00000288873 NUP155O75694 1391 aa28.8■■■□□ 2.2
KRTCAP3-201ENST00000288873 CAMSAP1Q5T5Y3 1602 aa28.79■■■□□ 2.2
KRTCAP3-201ENST00000288873 LMTK2Q8IWU2 1503 aa28.77■■■□□ 2.2
KRTCAP3-201ENST00000288873 IQGAP3Q86VI3 1631 aa28.76■■■□□ 2.2
KRTCAP3-201ENST00000288873 TRIM52Q96A61 297 aa28.76■■■□□ 2.19
KRTCAP3-201ENST00000288873 RAB3GAP2Q9H2M9 1393 aa28.75■■■□□ 2.19
KRTCAP3-201ENST00000288873 PZPP20742 1482 aa28.72■■■□□ 2.19
KRTCAP3-201ENST00000288873 TET3O43151 1660 aa28.71■■■□□ 2.19
KRTCAP3-201ENST00000288873 ARHGAP31Q2M1Z3 1444 aa28.69■■■□□ 2.18
KRTCAP3-201ENST00000288873 EFCAB6Q5THR3 1501 aa28.69■■■□□ 2.18
KRTCAP3-201ENST00000288873 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
KRTCAP3-201ENST00000288873 LMTK3Q96Q04 1460 aa28.69■■■□□ 2.18
KRTCAP3-201ENST00000288873 CFAP65Q6ZU64 1925 aaKnown RBP28.67■■■□□ 2.18
KRTCAP3-201ENST00000288873 NPATQ14207 1427 aa28.67■■■□□ 2.18
KRTCAP3-201ENST00000288873 ACIN1Q9UKV3 1341 aaKnown RBP28.67■■■□□ 2.18
KRTCAP3-201ENST00000288873 HRCP23327 699 aa28.63■■■□□ 2.17
KRTCAP3-201ENST00000288873 SETD1BQ9UPS6 1966 aaKnown RBP28.62■■■□□ 2.17
KRTCAP3-201ENST00000288873 E9PCH4 1651 aa28.62■■■□□ 2.17
KRTCAP3-201ENST00000288873 PREX1Q8TCU6 1659 aa28.62■■■□□ 2.17
KRTCAP3-201ENST00000288873 ERVK-7P63135 1459 aa28.61■■■□□ 2.17
KRTCAP3-201ENST00000288873 SLC4A1APQ9BWU0 796 aaKnown RBP28.61■■■□□ 2.17
KRTCAP3-201ENST00000288873 RPRD2Q5VT52 1461 aaKnown RBP28.6■■■□□ 2.17
KRTCAP3-201ENST00000288873 TNRQ92752 1358 aa28.6■■■□□ 2.17
KRTCAP3-201ENST00000288873 SPATA31D1Q6ZQQ2 1576 aa28.59■■■□□ 2.17
KRTCAP3-201ENST00000288873 MPHOSPH9Q99550 1183 aa28.56■■■□□ 2.16
KRTCAP3-201ENST00000288873 PKD2Q13563 968 aa28.55■■■□□ 2.16
KRTCAP3-201ENST00000288873 PCGF6Q9BYE7 350 aa28.55■■■□□ 2.16
KRTCAP3-201ENST00000288873 NOS1P29475 1434 aa28.53■■■□□ 2.16
KRTCAP3-201ENST00000288873 UHRF1BP1Q6BDS2 1440 aa28.53■■■□□ 2.16
KRTCAP3-201ENST00000288873 MYO3AQ8NEV4 1616 aa28.53■■■□□ 2.16
KRTCAP3-201ENST00000288873 SYNMO15061 1565 aa28.5■■■□□ 2.15
KRTCAP3-201ENST00000288873 HSPA2P54652 639 aa28.48■■■□□ 2.15
KRTCAP3-201ENST00000288873 FBXO41Q8TF61 875 aa28.48■■■□□ 2.15
KRTCAP3-201ENST00000288873 NLRP1Q9C000 1473 aa28.47■■■□□ 2.15
KRTCAP3-201ENST00000288873 SPHKAPQ2M3C7 1700 aa28.46■■■□□ 2.15
KRTCAP3-201ENST00000288873 FOXD1Q16676 465 aa28.46■■■□□ 2.15
KRTCAP3-201ENST00000288873 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.15
KRTCAP3-201ENST00000288873 A2ML1A8K2U0 1454 aa28.45■■■□□ 2.14
KRTCAP3-201ENST00000288873 ZNF142P52746 1687 aaPredicted RBP28.45■■■□□ 2.14
KRTCAP3-201ENST00000288873 PTPRTO14522 1441 aa28.43■■■□□ 2.14
KRTCAP3-201ENST00000288873 SLC52A1Q9NWF4 448 aa28.42■■■□□ 2.14
KRTCAP3-201ENST00000288873 IDI1Q13907 227 aa28.41■■■□□ 2.14
KRTCAP3-201ENST00000288873 UGGT1Q9NYU2 1555 aa28.4■■■□□ 2.14
KRTCAP3-201ENST00000288873 PIK3C2BO00750 1634 aa28.39■■■□□ 2.13
KRTCAP3-201ENST00000288873 PLA2R1Q13018 1463 aa28.39■■■□□ 2.13
KRTCAP3-201ENST00000288873 TRPM2O94759 1503 aa28.38■■■□□ 2.13
KRTCAP3-201ENST00000288873 UBR1Q8IWV7 1749 aa28.35■■■□□ 2.13
KRTCAP3-201ENST00000288873 STAG3Q9UJ98 1225 aa28.34■■■□□ 2.13
KRTCAP3-201ENST00000288873 CLTCL1P53675 1640 aa28.32■■■□□ 2.12
KRTCAP3-201ENST00000288873 THEMISQ8N1K5 641 aaPredicted RBP28.32■■■□□ 2.12
KRTCAP3-201ENST00000288873 ADGRB3O60242 1522 aa28.3■■■□□ 2.12
KRTCAP3-201ENST00000288873 CHGAP10645 457 aaKnown RBP28.3■■■□□ 2.12
KRTCAP3-201ENST00000288873 KDM5AP29375 1690 aaKnown RBP28.29■■■□□ 2.12
KRTCAP3-201ENST00000288873 TMEM131LA2VDJ0 1609 aa28.27■■■□□ 2.12
KRTCAP3-201ENST00000288873 CCDC144AA2RUR9 1427 aa28.26■■■□□ 2.12
KRTCAP3-201ENST00000288873 MYO5BQ9ULV0 1848 aa28.26■■■□□ 2.11
KRTCAP3-201ENST00000288873 DHX57Q6P158 1386 aaKnown RBP28.25■■■□□ 2.11
KRTCAP3-201ENST00000288873 ANKRD30BQ9BXX2 1392 aa28.25■■■□□ 2.11
KRTCAP3-201ENST00000288873 KIF1BO60333 1816 aa28.25■■■□□ 2.11
KRTCAP3-201ENST00000288873 STRCQ7RTU9 1775 aa28.21■■■□□ 2.11
KRTCAP3-201ENST00000288873 TMEM2Q9UHN6 1383 aa28.19■■■□□ 2.1
KRTCAP3-201ENST00000288873 NCKAP5LQ9HCH0 1330 aa28.18■■■□□ 2.1
KRTCAP3-201ENST00000288873 SLIT1O75093 1534 aa28.18■■■□□ 2.1
KRTCAP3-201ENST00000288873 CERKQ8TCT0 537 aa28.18■■■□□ 2.1
KRTCAP3-201ENST00000288873 DMRT2Q9Y5R5 561 aa28.18■■■□□ 2.1
KRTCAP3-201ENST00000288873 ARHGAP23Q9P227 1491 aa28.18■■■□□ 2.1
KRTCAP3-201ENST00000288873 ANKLE2Q86XL3 938 aa28.17■■■□□ 2.1
KRTCAP3-201ENST00000288873 ZNF326Q5BKZ1 582 aaKnown RBP28.16■■■□□ 2.1
KRTCAP3-201ENST00000288873 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
KRTCAP3-201ENST00000288873 EID1Q9Y6B2 187 aa28.14■■■□□ 2.1
KRTCAP3-201ENST00000288873 RIMS2Q9UQ26 1411 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms