RNA–Protein interactions for RNA: ENST00000283882.3

CFDP1-201, Transcript of craniofacial development protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFDP1, Length 1,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-201ENST00000283882 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
CFDP1-201ENST00000283882 AFAP1Q8N556 730 aa18.46■□□□□ 0.55
CFDP1-201ENST00000283882 FRMPD1Q5SYB0 1578 aa18.46■□□□□ 0.55
CFDP1-201ENST00000283882 TSPOAP1O95153 1857 aa18.46■□□□□ 0.54
CFDP1-201ENST00000283882 UNC13BO14795 1591 aa18.45■□□□□ 0.54
CFDP1-201ENST00000283882 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
CFDP1-201ENST00000283882 MAGI2Q86UL8 1455 aa18.43■□□□□ 0.54
CFDP1-201ENST00000283882 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
CFDP1-201ENST00000283882 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.53
CFDP1-201ENST00000283882 DHX29Q7Z478 1369 aaKnown RBP18.39■□□□□ 0.53
CFDP1-201ENST00000283882 PZPP20742 1482 aa18.39■□□□□ 0.53
CFDP1-201ENST00000283882 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
CFDP1-201ENST00000283882 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
CFDP1-201ENST00000283882 A2MP01023 1474 aa18.37■□□□□ 0.53
CFDP1-201ENST00000283882 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
CFDP1-201ENST00000283882 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
CFDP1-201ENST00000283882 REREQ9P2R6 1566 aa18.36■□□□□ 0.53
CFDP1-201ENST00000283882 RNF17Q9BXT8 1623 aaKnown RBP18.34■□□□□ 0.53
CFDP1-201ENST00000283882 RAPGEF3O95398 923 aa18.34■□□□□ 0.53
CFDP1-201ENST00000283882 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
CFDP1-201ENST00000283882 PRDM15P57071 1507 aaPredicted RBP18.33■□□□□ 0.53
CFDP1-201ENST00000283882 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
CFDP1-201ENST00000283882 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
CFDP1-201ENST00000283882 VWDEQ8N2E2 1590 aa18.32■□□□□ 0.52
CFDP1-201ENST00000283882 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
CFDP1-201ENST00000283882 NUP155O75694 1391 aa18.31■□□□□ 0.52
CFDP1-201ENST00000283882 ARHGEF40Q8TER5 1519 aa18.31■□□□□ 0.52
CFDP1-201ENST00000283882 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
CFDP1-201ENST00000283882 MROH1Q8NDA8 1641 aa18.3■□□□□ 0.52
CFDP1-201ENST00000283882 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
CFDP1-201ENST00000283882 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
CFDP1-201ENST00000283882 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
CFDP1-201ENST00000283882 ATP10AO60312 1499 aa18.27■□□□□ 0.52
CFDP1-201ENST00000283882 AGLP35573 1532 aa18.27■□□□□ 0.51
CFDP1-201ENST00000283882 LMTK2Q8IWU2 1503 aa18.26■□□□□ 0.51
CFDP1-201ENST00000283882 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
CFDP1-201ENST00000283882 KANK1Q14678 1352 aa18.25■□□□□ 0.51
CFDP1-201ENST00000283882 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
CFDP1-201ENST00000283882 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
CFDP1-201ENST00000283882 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
CFDP1-201ENST00000283882 TET3O43151 1660 aa18.24■□□□□ 0.51
CFDP1-201ENST00000283882 KIF3BO15066 747 aa18.21■□□□□ 0.51
CFDP1-201ENST00000283882 ZC3H13Q5T200 1668 aaKnown RBP18.2■□□□□ 0.5
CFDP1-201ENST00000283882 PKD2Q13563 968 aa18.2■□□□□ 0.5
CFDP1-201ENST00000283882 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
CFDP1-201ENST00000283882 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
CFDP1-201ENST00000283882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.52e-6■■■□□ 17.1
CFDP1-201ENST00000283882 ABCC3O15438 1527 aa18.16■□□□□ 0.5
CFDP1-201ENST00000283882 E9PCH4 1651 aa18.15■□□□□ 0.5
CFDP1-201ENST00000283882 CEP152O94986 1710 aa18.13■□□□□ 0.49
CFDP1-201ENST00000283882 TRPM2O94759 1503 aa18.13■□□□□ 0.49
CFDP1-201ENST00000283882 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
CFDP1-201ENST00000283882 PTPRTO14522 1441 aa18.12■□□□□ 0.49
CFDP1-201ENST00000283882 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
CFDP1-201ENST00000283882 ARHGAP31Q2M1Z3 1444 aa18.11■□□□□ 0.49
CFDP1-201ENST00000283882 PLA2R1Q13018 1463 aa18.11■□□□□ 0.49
CFDP1-201ENST00000283882 SPHKAPQ2M3C7 1700 aa18.1■□□□□ 0.49
CFDP1-201ENST00000283882 SIGLEC1Q9BZZ2 1709 aa18.1■□□□□ 0.49
CFDP1-201ENST00000283882 CAMSAP1Q5T5Y3 1602 aa18.1■□□□□ 0.49
CFDP1-201ENST00000283882 CCDC144AA2RUR9 1427 aa18.07■□□□□ 0.48
CFDP1-201ENST00000283882 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
CFDP1-201ENST00000283882 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
CFDP1-201ENST00000283882 GGT6Q6P531 493 aa18.06■□□□□ 0.48
CFDP1-201ENST00000283882 NPATQ14207 1427 aa18.05■□□□□ 0.48
CFDP1-201ENST00000283882 WASHC2CQ9Y4E1 1318 aa18.04■□□□□ 0.48
CFDP1-201ENST00000283882 CNTLNQ9NXG0 1405 aa18.04■□□□□ 0.48
CFDP1-201ENST00000283882 NOS1P29475 1434 aa18.01■□□□□ 0.47
CFDP1-201ENST00000283882 CLTCL1P53675 1640 aa18■□□□□ 0.47
CFDP1-201ENST00000283882 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
CFDP1-201ENST00000283882 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
CFDP1-201ENST00000283882 CLTCQ00610 1675 aaKnown RBP17.97■□□□□ 0.47
CFDP1-201ENST00000283882 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
CFDP1-201ENST00000283882 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
CFDP1-201ENST00000283882 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
CFDP1-201ENST00000283882 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
CFDP1-201ENST00000283882 SYNMO15061 1565 aa17.95■□□□□ 0.46
CFDP1-201ENST00000283882 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
CFDP1-201ENST00000283882 SPATA31D1Q6ZQQ2 1576 aa17.94■□□□□ 0.46
CFDP1-201ENST00000283882 ERVK-7P63135 1459 aa17.94■□□□□ 0.46
CFDP1-201ENST00000283882 ADGRB3O60242 1522 aa17.93■□□□□ 0.46
CFDP1-201ENST00000283882 KIF1BO60333 1816 aa17.91■□□□□ 0.46
CFDP1-201ENST00000283882 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
CFDP1-201ENST00000283882 STAC3Q96MF2 364 aa17.9■□□□□ 0.46
CFDP1-201ENST00000283882 UGGT1Q9NYU2 1555 aa17.89■□□□□ 0.45
CFDP1-201ENST00000283882 ESF1Q9H501 851 aaKnown RBP17.88■□□□□ 0.45
CFDP1-201ENST00000283882 SLC52A1Q9NWF4 448 aa17.88■□□□□ 0.45
CFDP1-201ENST00000283882 FER1L4A9Z1Z3 1794 aa17.88■□□□□ 0.45
CFDP1-201ENST00000283882 MLECQ14165 292 aa17.86■□□□□ 0.45
CFDP1-201ENST00000283882 ZMYM3Q14202 1370 aa17.86■□□□□ 0.45
CFDP1-201ENST00000283882 MYOM2P54296 1465 aa17.85■□□□□ 0.45
CFDP1-201ENST00000283882 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
CFDP1-201ENST00000283882 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
CFDP1-201ENST00000283882 PRAG1Q86YV5 1406 aa17.84■□□□□ 0.45
CFDP1-201ENST00000283882 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.44
CFDP1-201ENST00000283882 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
CFDP1-201ENST00000283882 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
CFDP1-201ENST00000283882 MADDQ8WXG6 1647 aa17.81■□□□□ 0.44
CFDP1-201ENST00000283882 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
CFDP1-201ENST00000283882 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
CFDP1-201ENST00000283882 NBPF8Q3BBV2 869 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms