RNA–Protein interactions for RNA: ENST00000282701.2

BMP3-201, Transcript of bone morphogenetic protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BMP3, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3-201ENST00000282701 CENPQQ7L2Z9 268 aaPredicted RBP20.42■□□□□ 0.86
BMP3-201ENST00000282701 KIF3AQ9Y496 699 aa20.42■□□□□ 0.86
BMP3-201ENST00000282701 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
BMP3-201ENST00000282701 TAF7LQ5H9L4 462 aa20.42■□□□□ 0.86
BMP3-201ENST00000282701 CREBRFQ8IUR6 639 aa20.41■□□□□ 0.86
BMP3-201ENST00000282701 FAM161AQ3B820 660 aa20.41■□□□□ 0.86
BMP3-201ENST00000282701 TERF2IPQ9NYB0 399 aa20.41■□□□□ 0.86
BMP3-201ENST00000282701 GSE1Q14687 1217 aa20.41■□□□□ 0.86
BMP3-201ENST00000282701 SKOR2Q2VWA4 1001 aaPredicted RBP20.4■□□□□ 0.86
BMP3-201ENST00000282701 PDE4AP27815 886 aa20.4■□□□□ 0.86
BMP3-201ENST00000282701 SF3A1Q15459 793 aaKnown RBP20.39■□□□□ 0.85
BMP3-201ENST00000282701 KIF15Q9NS87 1388 aa20.39■□□□□ 0.85
BMP3-201ENST00000282701 DDX49Q9Y6V7 483 aaKnown RBP20.38■□□□□ 0.85
BMP3-201ENST00000282701 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
BMP3-201ENST00000282701 MYBBP1AQ9BQG0 1328 aaKnown RBP20.37■□□□□ 0.85
BMP3-201ENST00000282701 PDE4CQ08493 712 aa20.36■□□□□ 0.85
BMP3-201ENST00000282701 SLC4A3P48751 1232 aa20.34■□□□□ 0.85
BMP3-201ENST00000282701 H3BQV1 296 aa20.34■□□□□ 0.85
BMP3-201ENST00000282701 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
BMP3-201ENST00000282701 ATP6V1DQ9Y5K8 247 aa20.34■□□□□ 0.85
BMP3-201ENST00000282701 SETQ01105 290 aaPredicted RBP20.33■□□□□ 0.85
BMP3-201ENST00000282701 GOLGA6L19H0YKK7 550 aa20.33■□□□□ 0.84
BMP3-201ENST00000282701 CEP89Q96ST8 783 aa20.32■□□□□ 0.84
BMP3-201ENST00000282701 CARMIL2Q6F5E8 1435 aa20.32■□□□□ 0.84
BMP3-201ENST00000282701 TOMM22Q9NS69 142 aa20.32■□□□□ 0.84
BMP3-201ENST00000282701 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
BMP3-201ENST00000282701 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
BMP3-201ENST00000282701 TPD52L1Q16890 204 aaPredicted RBP20.3■□□□□ 0.84
BMP3-201ENST00000282701 ANKRD45Q5TZF3 282 aa20.3■□□□□ 0.84
BMP3-201ENST00000282701 RILPL2Q969X0 211 aa20.3■□□□□ 0.84
BMP3-201ENST00000282701 BECN2A8MW95 431 aa20.29■□□□□ 0.84
BMP3-201ENST00000282701 FAM184AQ8NB25 1140 aa20.29■□□□□ 0.84
BMP3-201ENST00000282701 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
BMP3-201ENST00000282701 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
BMP3-201ENST00000282701 PES1O00541 588 aaKnown RBP20.28■□□□□ 0.84
BMP3-201ENST00000282701 TSR1Q2NL82 804 aaKnown RBP20.28■□□□□ 0.84
BMP3-201ENST00000282701 VSIG10Q8N0Z9 540 aa20.28■□□□□ 0.84
BMP3-201ENST00000282701 CHMP4CQ96CF2 233 aa20.28■□□□□ 0.84
BMP3-201ENST00000282701 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
BMP3-201ENST00000282701 CCAR2Q8N163 923 aaKnown RBP20.28■□□□□ 0.84
BMP3-201ENST00000282701 PLIN1O60240 522 aa20.27■□□□□ 0.84
BMP3-201ENST00000282701 GPS2Q13227 327 aa20.27■□□□□ 0.84
BMP3-201ENST00000282701 CRBNQ96SW2 442 aa20.27■□□□□ 0.84
BMP3-201ENST00000282701 ZKSCAN2Q63HK3 967 aa20.26■□□□□ 0.83
BMP3-201ENST00000282701 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
BMP3-201ENST00000282701 E9PSI1 815 aa20.26■□□□□ 0.83
BMP3-201ENST00000282701 PRM3Q9NNZ6 103 aa20.26■□□□□ 0.83
BMP3-201ENST00000282701 FANCIQ9NVI1 1328 aa20.26■□□□□ 0.83
BMP3-201ENST00000282701 MARCH6O60337 910 aa20.25■□□□□ 0.83
BMP3-201ENST00000282701 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
BMP3-201ENST00000282701 AMPHP49418 695 aa20.25■□□□□ 0.83
BMP3-201ENST00000282701 FOXD4L6Q3SYB3 417 aaPredicted RBP20.25■□□□□ 0.83
BMP3-201ENST00000282701 FOXD4L3Q6VB84 417 aaPredicted RBP20.25■□□□□ 0.83
BMP3-201ENST00000282701 TPM1P09493 284 aa20.25■□□□□ 0.83
BMP3-201ENST00000282701 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
BMP3-201ENST00000282701 CGNL1Q0VF96 1302 aa20.24■□□□□ 0.83
BMP3-201ENST00000282701 BCL2L13Q9BXK5 485 aa20.24■□□□□ 0.83
BMP3-201ENST00000282701 ZNF771Q7L3S4 317 aaPredicted RBP20.23■□□□□ 0.83
BMP3-201ENST00000282701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
BMP3-201ENST00000282701 CCDC70Q6NSX1 233 aa20.23■□□□□ 0.83
BMP3-201ENST00000282701 PANK3Q9H999 370 aa20.23■□□□□ 0.83
BMP3-201ENST00000282701 KIF3BO15066 747 aa20.22■□□□□ 0.83
BMP3-201ENST00000282701 TPM2P07951 284 aa20.22■□□□□ 0.83
BMP3-201ENST00000282701 ZNF592Q92610 1267 aa20.22■□□□□ 0.83
BMP3-201ENST00000282701 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
BMP3-201ENST00000282701 VPS53Q5VIR6 699 aa20.2■□□□□ 0.82
BMP3-201ENST00000282701 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
BMP3-201ENST00000282701 FRAT2O75474 233 aaPredicted RBP20.19■□□□□ 0.82
BMP3-201ENST00000282701 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
BMP3-201ENST00000282701 DIAPH3Q9NSV4 1193 aa20.19■□□□□ 0.82
BMP3-201ENST00000282701 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
BMP3-201ENST00000282701 REC8O95072 547 aa20.18■□□□□ 0.82
BMP3-201ENST00000282701 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
BMP3-201ENST00000282701 AKAP17AQ02040 695 aaKnown RBP20.18■□□□□ 0.82
BMP3-201ENST00000282701 LTV1Q96GA3 475 aaPredicted RBP20.18■□□□□ 0.82
BMP3-201ENST00000282701 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
BMP3-201ENST00000282701 HNRNPMP52272 730 aaKnown RBP eCLIP20.18■□□□□ 0.82
BMP3-201ENST00000282701 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
BMP3-201ENST00000282701 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
BMP3-201ENST00000282701 G3V3G9 751 aa20.17■□□□□ 0.82
BMP3-201ENST00000282701 DCAF8Q5TAQ9 597 aa20.17■□□□□ 0.82
BMP3-201ENST00000282701 CHMP5Q9NZZ3 219 aa20.17■□□□□ 0.82
BMP3-201ENST00000282701 RUFY2Q8WXA3 655 aa20.16■□□□□ 0.82
BMP3-201ENST00000282701 TRAK1Q9UPV9 953 aa20.16■□□□□ 0.82
BMP3-201ENST00000282701 CCDC9Q9Y3X0 531 aaKnown RBP20.16■□□□□ 0.82
BMP3-201ENST00000282701 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
BMP3-201ENST00000282701 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.15■□□□□ 0.82
BMP3-201ENST00000282701 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.82
BMP3-201ENST00000282701 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.82
BMP3-201ENST00000282701 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.82
BMP3-201ENST00000282701 CCDC18Q5T9S5 1454 aa20.14■□□□□ 0.82
BMP3-201ENST00000282701 FAM13BQ9NYF5 915 aa20.14■□□□□ 0.81
BMP3-201ENST00000282701 TEX35Q5T0J7 233 aa20.14■□□□□ 0.81
BMP3-201ENST00000282701 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
BMP3-201ENST00000282701 RSPH4AQ5TD94 716 aa20.13■□□□□ 0.81
BMP3-201ENST00000282701 CCDC144AA2RUR9 1427 aa20.13■□□□□ 0.81
BMP3-201ENST00000282701 CPLX2Q6PUV4 134 aaKnown RBP20.12■□□□□ 0.81
BMP3-201ENST00000282701 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
BMP3-201ENST00000282701 EID1Q9Y6B2 187 aa20.12■□□□□ 0.81
BMP3-201ENST00000282701 IPO7O95373 1038 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms