RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
NOTCH1-201ENST00000277541 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
NOTCH1-201ENST00000277541 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
NOTCH1-201ENST00000277541 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
NOTCH1-201ENST00000277541 NOL8Q76FK4 1167 aaKnown RBP16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 CHMP4CQ96CF2 233 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 TPM1P09493 284 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 FOXD1Q16676 465 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 MAP7D2Q96T17 732 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 WIZO95785 1651 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 ANKRD30AQ9BXX3 1397 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 H3BQV1 296 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 ISY1Q9ULR0 285 aaKnown RBP16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 RASSF8Q8NHQ8 419 aa16.77■□□□□ 0.28
NOTCH1-201ENST00000277541 BECN2A8MW95 431 aa16.77■□□□□ 0.28
NOTCH1-201ENST00000277541 CGNL1Q0VF96 1302 aa16.77■□□□□ 0.28
NOTCH1-201ENST00000277541 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.27
NOTCH1-201ENST00000277541 NUP155O75694 1391 aa16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 FOXD4L5Q5VV16 416 aaPredicted RBP16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 FOXD4L4Q8WXT5 416 aaPredicted RBP16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 CCDC18Q5T9S5 1454 aa16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 CALRP27797 417 aaKnown RBP16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 REC8O95072 547 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 ZNF592Q92610 1267 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 GORABQ5T7V8 394 aa16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 SLC4A3P48751 1232 aa16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 TPD52L1Q16890 204 aaPredicted RBP16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 E9PSI1 815 aa16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 SOX12O15370 315 aa16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 TPM2P07951 284 aa16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 CEP89Q96ST8 783 aa16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 ARGLU1Q9NWB6 273 aaPredicted RBP16.71■□□□□ 0.27
NOTCH1-201ENST00000277541 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
NOTCH1-201ENST00000277541 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.27
NOTCH1-201ENST00000277541 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.26
NOTCH1-201ENST00000277541 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
NOTCH1-201ENST00000277541 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 CWC15Q9P013 229 aaKnown RBP16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 NASPP49321 788 aaPredicted RBP16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 ANKRD45Q5TZF3 282 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 MRE11P49959 708 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 ACBD3Q9H3P7 528 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 IPO7O95373 1038 aaKnown RBP16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 HOOK1Q9UJC3 728 aaKnown RBP16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 NUCB2P80303 420 aa16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 USP47Q96K76 1375 aa16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 CCDC66A2RUB6 948 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PKNOX2Q96KN3 472 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 AK7Q96M32 723 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PLIN1O60240 522 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 STK26Q9P289 416 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 ANKRD20A12PQ8NF67 263 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 AAMPQ13685 434 aa16.63■□□□□ 0.25
NOTCH1-201ENST00000277541 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
NOTCH1-201ENST00000277541 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
NOTCH1-201ENST00000277541 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 HSP90B2PQ58FF3 399 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 RUFY1Q96T51 708 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 CUX1P39880 1505 aa16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 TMX4Q9H1E5 349 aaPredicted RBP16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 PDE4CQ08493 712 aa16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 ZKSCAN1P17029 563 aaPredicted RBP16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms