RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 SCAF1Q9H7N4 1312 aaKnown RBP29.41■■■□□ 2.3
LYSMD2-201ENST00000267838 FAM69CQ0P6D2 419 aa29.4■■■□□ 2.3
LYSMD2-201ENST00000267838 DEPDC5O75140 1603 aa29.4■■■□□ 2.3
LYSMD2-201ENST00000267838 EIF2AK4Q9P2K8 1649 aaKnown RBP29.4■■■□□ 2.3
LYSMD2-201ENST00000267838 DHX29Q7Z478 1369 aaKnown RBP29.39■■■□□ 2.3
LYSMD2-201ENST00000267838 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.3
LYSMD2-201ENST00000267838 MLH3Q9UHC1 1453 aa29.39■■■□□ 2.3
LYSMD2-201ENST00000267838 RICTORQ6R327 1708 aa29.32■■■□□ 2.28
LYSMD2-201ENST00000267838 A2MP01023 1474 aa29.3■■■□□ 2.28
LYSMD2-201ENST00000267838 KIF3BO15066 747 aa29.29■■■□□ 2.28
LYSMD2-201ENST00000267838 RAPGEF3O95398 923 aa29.29■■■□□ 2.28
LYSMD2-201ENST00000267838 PPRC1Q5VV67 1664 aaKnown RBP29.29■■■□□ 2.28
LYSMD2-201ENST00000267838 CENPBP07199 599 aaPredicted RBP29.28■■■□□ 2.28
LYSMD2-201ENST00000267838 ABCA6Q8N139 1617 aa29.27■■■□□ 2.28
LYSMD2-201ENST00000267838 TSPOAP1O95153 1857 aa29.27■■■□□ 2.28
LYSMD2-201ENST00000267838 VWDEQ8N2E2 1590 aa29.27■■■□□ 2.28
LYSMD2-201ENST00000267838 PRDM15P57071 1507 aaPredicted RBP29.27■■■□□ 2.28
LYSMD2-201ENST00000267838 KANK1Q14678 1352 aa29.26■■■□□ 2.27
LYSMD2-201ENST00000267838 PLA2R1Q13018 1463 aa29.26■■■□□ 2.27
LYSMD2-201ENST00000267838 MROH1Q8NDA8 1641 aa29.26■■■□□ 2.27
LYSMD2-201ENST00000267838 FRMPD1Q5SYB0 1578 aa29.24■■■□□ 2.27
LYSMD2-201ENST00000267838 ATP10AO60312 1499 aa29.24■■■□□ 2.27
LYSMD2-201ENST00000267838 CCDC144AA2RUR9 1427 aa29.24■■■□□ 2.27
LYSMD2-201ENST00000267838 PELP1Q8IZL8 1130 aaKnown RBP29.24■■■□□ 2.27
LYSMD2-201ENST00000267838 KIF13AQ9H1H9 1805 aa29.23■■■□□ 2.27
LYSMD2-201ENST00000267838 E9PCH4 1651 aa29.23■■■□□ 2.27
LYSMD2-201ENST00000267838 TET3O43151 1660 aa29.23■■■□□ 2.27
LYSMD2-201ENST00000267838 RNF17Q9BXT8 1623 aaKnown RBP29.21■■■□□ 2.27
LYSMD2-201ENST00000267838 NBPF8Q3BBV2 869 aa29.2■■■□□ 2.26
LYSMD2-201ENST00000267838 DIP2CQ9Y2E4 1556 aa29.19■■■□□ 2.26
LYSMD2-201ENST00000267838 BCORL1Q5H9F3 1711 aa29.19■■■□□ 2.26
LYSMD2-201ENST00000267838 ZMYM4Q5VZL5 1548 aa29.14■■■□□ 2.26
LYSMD2-201ENST00000267838 HIRIP3Q9BW71 556 aaPredicted RBP29.13■■■□□ 2.25
LYSMD2-201ENST00000267838 SPHKAPQ2M3C7 1700 aa29.12■■■□□ 2.25
LYSMD2-201ENST00000267838 LMTK2Q8IWU2 1503 aa29.11■■■□□ 2.25
LYSMD2-201ENST00000267838 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
LYSMD2-201ENST00000267838 TRPM2O94759 1503 aa29.1■■■□□ 2.25
LYSMD2-201ENST00000267838 YEATS2Q9ULM3 1422 aa29.1■■■□□ 2.25
LYSMD2-201ENST00000267838 PTPRTO14522 1441 aa29.1■■■□□ 2.25
LYSMD2-201ENST00000267838 CEP152O94986 1710 aa29.09■■■□□ 2.25
LYSMD2-201ENST00000267838 EFCAB6Q5THR3 1501 aa29.08■■■□□ 2.25
LYSMD2-201ENST00000267838 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
LYSMD2-201ENST00000267838 HSPA5P11021 654 aaKnown RBP29.06■■■□□ 2.24
LYSMD2-201ENST00000267838 DCAF11Q8TEB1 546 aa29.05■■■□□ 2.24
LYSMD2-201ENST00000267838 ZNF326Q5BKZ1 582 aaKnown RBP29.04■■■□□ 2.24
LYSMD2-201ENST00000267838 GGT6Q6P531 493 aa29.03■■■□□ 2.24
LYSMD2-201ENST00000267838 MIER1Q8N108 512 aa29.02■■■□□ 2.24
LYSMD2-201ENST00000267838 KDM2AQ9Y2K7 1162 aa29.01■■■□□ 2.23
LYSMD2-201ENST00000267838 CLTCL1P53675 1640 aa29.01■■■□□ 2.23
LYSMD2-201ENST00000267838 RGL3Q3MIN7 710 aa29■■■□□ 2.23
LYSMD2-201ENST00000267838 RALGAPBQ86X10 1494 aa29■■■□□ 2.23
LYSMD2-201ENST00000267838 ABCC3O15438 1527 aa28.98■■■□□ 2.23
LYSMD2-201ENST00000267838 SPATA31E1Q6ZUB1 1445 aa28.97■■■□□ 2.23
LYSMD2-201ENST00000267838 TRHP20396 242 aaPredicted RBP28.94■■■□□ 2.22
LYSMD2-201ENST00000267838 DDX10Q13206 875 aaKnown RBP28.94■■■□□ 2.22
LYSMD2-201ENST00000267838 WASHC2CQ9Y4E1 1318 aa28.94■■■□□ 2.22
LYSMD2-201ENST00000267838 REREQ9P2R6 1566 aa28.93■■■□□ 2.22
LYSMD2-201ENST00000267838 COL17A1Q9UMD9 1497 aaPredicted RBP28.93■■■□□ 2.22
LYSMD2-201ENST00000267838 PRAG1Q86YV5 1406 aa28.93■■■□□ 2.22
LYSMD2-201ENST00000267838 CAMSAP1Q5T5Y3 1602 aa28.92■■■□□ 2.22
LYSMD2-201ENST00000267838 ZC3H13Q5T200 1668 aaKnown RBP28.92■■■□□ 2.22
LYSMD2-201ENST00000267838 NPATQ14207 1427 aa28.91■■■□□ 2.22
LYSMD2-201ENST00000267838 TRPM1Q7Z4N2 1603 aa28.9■■■□□ 2.22
LYSMD2-201ENST00000267838 NEURL4Q96JN8 1562 aa28.89■■■□□ 2.22
LYSMD2-201ENST00000267838 UGGT1Q9NYU2 1555 aa28.87■■■□□ 2.21
LYSMD2-201ENST00000267838 USP47Q96K76 1375 aa28.87■■■□□ 2.21
LYSMD2-201ENST00000267838 AGLP35573 1532 aa28.86■■■□□ 2.21
LYSMD2-201ENST00000267838 KIF1BO60333 1816 aa28.86■■■□□ 2.21
LYSMD2-201ENST00000267838 ARHGEF40Q8TER5 1519 aa28.84■■■□□ 2.21
LYSMD2-201ENST00000267838 CARD11Q9BXL7 1154 aa28.84■■■□□ 2.21
LYSMD2-201ENST00000267838 GTF3C3Q9Y5Q9 886 aa28.83■■■□□ 2.21
LYSMD2-201ENST00000267838 WASHC2AQ641Q2 1341 aa28.83■■■□□ 2.21
LYSMD2-201ENST00000267838 CNTLNQ9NXG0 1405 aa28.83■■■□□ 2.2
LYSMD2-201ENST00000267838 ROCK2O75116 1388 aaKnown RBP28.82■■■□□ 2.2
LYSMD2-201ENST00000267838 CFAP65Q6ZU64 1925 aaKnown RBP28.82■■■□□ 2.2
LYSMD2-201ENST00000267838 ARHGAP31Q2M1Z3 1444 aa28.81■■■□□ 2.2
LYSMD2-201ENST00000267838 POLR1AO95602 1720 aaPredicted RBP28.81■■■□□ 2.2
LYSMD2-201ENST00000267838 STAC3Q96MF2 364 aa28.8■■■□□ 2.2
LYSMD2-201ENST00000267838 SIGLEC1Q9BZZ2 1709 aa28.79■■■□□ 2.2
LYSMD2-201ENST00000267838 MADDQ8WXG6 1647 aa28.78■■■□□ 2.2
LYSMD2-201ENST00000267838 NOS1P29475 1434 aa28.77■■■□□ 2.2
LYSMD2-201ENST00000267838 LAMC1P11047 1609 aa28.77■■■□□ 2.2
LYSMD2-201ENST00000267838 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
LYSMD2-201ENST00000267838 C11orf95C9JLR9 678 aaPredicted RBP28.76■■■□□ 2.19
LYSMD2-201ENST00000267838 GPRASP1Q5JY77 1395 aa28.76■■■□□ 2.19
LYSMD2-201ENST00000267838 CCDC7Q96M83 1385 aa28.76■■■□□ 2.19
LYSMD2-201ENST00000267838 ADGRB3O60242 1522 aa28.74■■■□□ 2.19
LYSMD2-201ENST00000267838 NBPF1Q3BBV0 1214 aa28.73■■■□□ 2.19
LYSMD2-201ENST00000267838 SYNMO15061 1565 aa28.72■■■□□ 2.19
LYSMD2-201ENST00000267838 PPP6R1Q9UPN7 881 aa28.72■■■□□ 2.19
LYSMD2-201ENST00000267838 IFT172Q9UG01 1749 aa28.72■■■□□ 2.19
LYSMD2-201ENST00000267838 PIK3C2BO00750 1634 aa28.71■■■□□ 2.19
LYSMD2-201ENST00000267838 MYOM2P54296 1465 aa28.69■■■□□ 2.18
LYSMD2-201ENST00000267838 KIF7Q2M1P5 1343 aa28.69■■■□□ 2.18
LYSMD2-201ENST00000267838 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
LYSMD2-201ENST00000267838 CLTCQ00610 1675 aaKnown RBP28.65■■■□□ 2.18
LYSMD2-201ENST00000267838 ST20-MTHFSA0A0A6YYL1 179 aa28.65■■■□□ 2.18
LYSMD2-201ENST00000267838 CHGAP10645 457 aaKnown RBP28.65■■■□□ 2.18
LYSMD2-201ENST00000267838 KIAA1210Q9ULL0 1709 aa28.63■■■□□ 2.17
LYSMD2-201ENST00000267838 ARID4BQ4LE39 1312 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms