RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 EIF2AK4Q9P2K8 1649 aaKnown RBP35.37■■■■□ 3.25
R3HCC1-201ENST00000265806 TSPOAP1O95153 1857 aa35.36■■■■□ 3.25
R3HCC1-201ENST00000265806 RAPGEF3O95398 923 aa35.34■■■■□ 3.25
R3HCC1-201ENST00000265806 DEPDC5O75140 1603 aa35.33■■■■□ 3.25
R3HCC1-201ENST00000265806 RPRD2Q5VT52 1461 aaKnown RBP35.33■■■■□ 3.25
R3HCC1-201ENST00000265806 A2MP01023 1474 aa35.31■■■■□ 3.24
R3HCC1-201ENST00000265806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.3■■■■□ 3.24
R3HCC1-201ENST00000265806 FRMPD1Q5SYB0 1578 aa35.28■■■■□ 3.24
R3HCC1-201ENST00000265806 PPP1R15AO75807 674 aaPredicted RBP35.28■■■■□ 3.24
R3HCC1-201ENST00000265806 ABCA6Q8N139 1617 aa35.27■■■■□ 3.24
R3HCC1-201ENST00000265806 ZMYM4Q5VZL5 1548 aa35.25■■■■□ 3.23
R3HCC1-201ENST00000265806 KIF3BO15066 747 aa35.22■■■■□ 3.23
R3HCC1-201ENST00000265806 PRDM15P57071 1507 aaPredicted RBP35.21■■■■□ 3.23
R3HCC1-201ENST00000265806 VWDEQ8N2E2 1590 aa35.21■■■■□ 3.23
R3HCC1-201ENST00000265806 DIP2CQ9Y2E4 1556 aa35.2■■■■□ 3.23
R3HCC1-201ENST00000265806 MROH1Q8NDA8 1641 aa35.19■■■■□ 3.22
R3HCC1-201ENST00000265806 BCORL1Q5H9F3 1711 aa35.18■■■■□ 3.22
R3HCC1-201ENST00000265806 ZNF316A6NFI3 1004 aaPredicted RBP35.18■■■■□ 3.22
R3HCC1-201ENST00000265806 DNAJC5Q9H3Z4 198 aa35.18■■■■□ 3.22
R3HCC1-201ENST00000265806 KANK1Q14678 1352 aa35.17■■■■□ 3.22
R3HCC1-201ENST00000265806 RNF17Q9BXT8 1623 aaKnown RBP35.16■■■■□ 3.22
R3HCC1-201ENST00000265806 YEATS2Q9ULM3 1422 aa35.12■■■■□ 3.21
R3HCC1-201ENST00000265806 ATP10AO60312 1499 aa35.11■■■■□ 3.21
R3HCC1-201ENST00000265806 TET3O43151 1660 aa35.11■■■■□ 3.21
R3HCC1-201ENST00000265806 L3MBTL2Q969R5 705 aa35.1■■■■□ 3.21
R3HCC1-201ENST00000265806 PLA2R1Q13018 1463 aa35.08■■■■□ 3.21
R3HCC1-201ENST00000265806 E9PCH4 1651 aa35.05■■■■□ 3.2
R3HCC1-201ENST00000265806 LMTK2Q8IWU2 1503 aa35.05■■■■□ 3.2
R3HCC1-201ENST00000265806 COL17A1Q9UMD9 1497 aaPredicted RBP35.04■■■■□ 3.2
R3HCC1-201ENST00000265806 CCDC144AA2RUR9 1427 aa35.02■■■■□ 3.2
R3HCC1-201ENST00000265806 REREQ9P2R6 1566 aa34.99■■■■□ 3.19
R3HCC1-201ENST00000265806 PTPRTO14522 1441 aa34.96■■■■□ 3.19
R3HCC1-201ENST00000265806 EFCAB6Q5THR3 1501 aa34.96■■■■□ 3.19
R3HCC1-201ENST00000265806 GGT6Q6P531 493 aa34.93■■■■□ 3.18
R3HCC1-201ENST00000265806 CEP152O94986 1710 aa34.92■■■■□ 3.18
R3HCC1-201ENST00000265806 TRPM2O94759 1503 aa34.92■■■■□ 3.18
R3HCC1-201ENST00000265806 SPHKAPQ2M3C7 1700 aa34.92■■■■□ 3.18
R3HCC1-201ENST00000265806 ABCC3O15438 1527 aa34.89■■■■□ 3.18
R3HCC1-201ENST00000265806 AGLP35573 1532 aa34.89■■■■□ 3.18
R3HCC1-201ENST00000265806 ARHGEF40Q8TER5 1519 aa34.89■■■■□ 3.18
R3HCC1-201ENST00000265806 WASHC2CQ9Y4E1 1318 aa34.84■■■■□ 3.17
R3HCC1-201ENST00000265806 TRHP20396 242 aaPredicted RBP34.83■■■■□ 3.17
R3HCC1-201ENST00000265806 ZC3H13Q5T200 1668 aaKnown RBP34.83■■■■□ 3.17
R3HCC1-201ENST00000265806 NBPF8Q3BBV2 869 aa34.82■■■■□ 3.17
R3HCC1-201ENST00000265806 UHRF1BP1Q6BDS2 1440 aa34.82■■■■□ 3.16
R3HCC1-201ENST00000265806 NPATQ14207 1427 aa34.79■■■■□ 3.16
R3HCC1-201ENST00000265806 CAMSAP1Q5T5Y3 1602 aa34.78■■■■□ 3.16
R3HCC1-201ENST00000265806 CLTCL1P53675 1640 aa34.77■■■■□ 3.16
R3HCC1-201ENST00000265806 DIEXFQ68CQ4 756 aaKnown RBP34.77■■■■□ 3.16
R3HCC1-201ENST00000265806 SPATA31E1Q6ZUB1 1445 aa34.76■■■■□ 3.15
R3HCC1-201ENST00000265806 ARHGAP31Q2M1Z3 1444 aa34.75■■■■□ 3.15
R3HCC1-201ENST00000265806 PPP6R1Q9UPN7 881 aa34.74■■■■□ 3.15
R3HCC1-201ENST00000265806 DCAF11Q8TEB1 546 aa34.72■■■■□ 3.15
R3HCC1-201ENST00000265806 NEURL4Q96JN8 1562 aa34.72■■■■□ 3.15
R3HCC1-201ENST00000265806 SIGLEC1Q9BZZ2 1709 aa34.71■■■■□ 3.15
R3HCC1-201ENST00000265806 CNTLNQ9NXG0 1405 aa34.69■■■■□ 3.14
R3HCC1-201ENST00000265806 RGL3Q3MIN7 710 aa34.69■■■■□ 3.14
R3HCC1-201ENST00000265806 NOS1P29475 1434 aa34.65■■■■□ 3.14
R3HCC1-201ENST00000265806 KDM2AQ9Y2K7 1162 aa34.64■■■■□ 3.14
R3HCC1-201ENST00000265806 RALGAPBQ86X10 1494 aa34.64■■■■□ 3.14
R3HCC1-201ENST00000265806 UGGT1Q9NYU2 1555 aa34.62■■■■□ 3.13
R3HCC1-201ENST00000265806 PRAG1Q86YV5 1406 aa34.62■■■■□ 3.13
R3HCC1-201ENST00000265806 EIF4G2P78344 907 aaKnown RBP eCLIP34.62■■■■□ 3.13
R3HCC1-201ENST00000265806 ZNF326Q5BKZ1 582 aaKnown RBP34.62■■■■□ 3.13
R3HCC1-201ENST00000265806 STAC3Q96MF2 364 aa34.59■■■■□ 3.13
R3HCC1-201ENST00000265806 KIF1BO60333 1816 aa34.59■■■■□ 3.13
R3HCC1-201ENST00000265806 CFAP65Q6ZU64 1925 aaKnown RBP34.59■■■■□ 3.13
R3HCC1-201ENST00000265806 HSPA5P11021 654 aaKnown RBP34.57■■■■□ 3.12
R3HCC1-201ENST00000265806 HIRIP3Q9BW71 556 aaPredicted RBP34.55■■■■□ 3.12
R3HCC1-201ENST00000265806 SYNMO15061 1565 aa34.53■■■■□ 3.12
R3HCC1-201ENST00000265806 PIK3C2BO00750 1634 aa34.53■■■■□ 3.12
R3HCC1-201ENST00000265806 TRPM1Q7Z4N2 1603 aa34.51■■■■□ 3.12
R3HCC1-201ENST00000265806 ADGRB3O60242 1522 aa34.51■■■■□ 3.12
R3HCC1-201ENST00000265806 CLTCQ00610 1675 aaKnown RBP34.5■■■■□ 3.11
R3HCC1-201ENST00000265806 PREX1Q8TCU6 1659 aa34.5■■■■□ 3.11
R3HCC1-201ENST00000265806 MROH2AA6NES4 1674 aa34.47■■■■□ 3.11
R3HCC1-201ENST00000265806 MLECQ14165 292 aa34.46■■■■□ 3.11
R3HCC1-201ENST00000265806 SLC52A1Q9NWF4 448 aa34.44■■■■□ 3.1
R3HCC1-201ENST00000265806 MADDQ8WXG6 1647 aa34.44■■■■□ 3.1
R3HCC1-201ENST00000265806 ERVK-7P63135 1459 aa34.44■■■■□ 3.1
R3HCC1-201ENST00000265806 GPRASP1Q5JY77 1395 aa34.44■■■■□ 3.1
R3HCC1-201ENST00000265806 ROCK2O75116 1388 aaKnown RBP34.43■■■■□ 3.1
R3HCC1-201ENST00000265806 USP47Q96K76 1375 aa34.43■■■■□ 3.1
R3HCC1-201ENST00000265806 CARD11Q9BXL7 1154 aa34.43■■■■□ 3.1
R3HCC1-201ENST00000265806 MYOM2P54296 1465 aa34.42■■■■□ 3.1
R3HCC1-201ENST00000265806 ARID4BQ4LE39 1312 aaPredicted RBP34.42■■■■□ 3.1
R3HCC1-201ENST00000265806 IFT172Q9UG01 1749 aa34.42■■■■□ 3.1
R3HCC1-201ENST00000265806 LAMC1P11047 1609 aa34.4■■■■□ 3.1
R3HCC1-201ENST00000265806 SPATA31D1Q6ZQQ2 1576 aa34.37■■■■□ 3.09
R3HCC1-201ENST00000265806 IDI1Q13907 227 aa34.36■■■■□ 3.09
R3HCC1-201ENST00000265806 ESF1Q9H501 851 aaKnown RBP34.36■■■■□ 3.09
R3HCC1-201ENST00000265806 RPGRIP1LQ68CZ1 1315 aa34.36■■■■□ 3.09
R3HCC1-201ENST00000265806 FBXO31Q5XUX0 539 aaPredicted RBP34.36■■■■□ 3.09
R3HCC1-201ENST00000265806 CHGAP10645 457 aaKnown RBP34.34■■■■□ 3.09
R3HCC1-201ENST00000265806 ZMYM3Q14202 1370 aa34.33■■■■□ 3.09
R3HCC1-201ENST00000265806 NBPF1Q3BBV0 1214 aa34.33■■■■□ 3.09
R3HCC1-201ENST00000265806 NRXN1Q9ULB1 1477 aa34.32■■■■□ 3.09
R3HCC1-201ENST00000265806 PPLO60437 1756 aa34.31■■■■□ 3.08
R3HCC1-201ENST00000265806 KIAA1210Q9ULL0 1709 aa34.3■■■■□ 3.08
R3HCC1-201ENST00000265806 DDX10Q13206 875 aaKnown RBP34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms