RNA–Protein interactions for RNA: ENST00000265616.9

UBXN8-201, Transcript of UBX domain protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN8, Length 1,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-201ENST00000265616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
UBXN8-201ENST00000265616 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
UBXN8-201ENST00000265616 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
UBXN8-201ENST00000265616 AKNAQ7Z591 1439 aa11.23□□□□□ -0.61
UBXN8-201ENST00000265616 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
UBXN8-201ENST00000265616 FGD6Q6ZV73 1430 aa11.22□□□□□ -0.61
UBXN8-201ENST00000265616 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
UBXN8-201ENST00000265616 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
UBXN8-201ENST00000265616 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.61
UBXN8-201ENST00000265616 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
UBXN8-201ENST00000265616 SYNJ2O15056 1496 aa11.21□□□□□ -0.62
UBXN8-201ENST00000265616 HFM1A2PYH4 1435 aa11.21□□□□□ -0.62
UBXN8-201ENST00000265616 FHOD3Q2V2M9 1422 aa11.21□□□□□ -0.62
UBXN8-201ENST00000265616 HECW1Q76N89 1606 aa11.19□□□□□ -0.62
UBXN8-201ENST00000265616 PBRM1Q86U86 1689 aa11.19□□□□□ -0.62
UBXN8-201ENST00000265616 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
UBXN8-201ENST00000265616 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
UBXN8-201ENST00000265616 TCOF1Q13428 1488 aaKnown RBP11.18□□□□□ -0.62
UBXN8-201ENST00000265616 STK25O00506 426 aa11.18□□□□□ -0.62
UBXN8-201ENST00000265616 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
UBXN8-201ENST00000265616 UGGT2Q9NYU1 1516 aa11.17□□□□□ -0.62
UBXN8-201ENST00000265616 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
UBXN8-201ENST00000265616 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
UBXN8-201ENST00000265616 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
UBXN8-201ENST00000265616 GCC2Q8IWJ2 1684 aa11.16□□□□□ -0.62
UBXN8-201ENST00000265616 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
UBXN8-201ENST00000265616 LRRIQ1Q96JM4 1722 aa11.16□□□□□ -0.62
UBXN8-201ENST00000265616 IQGAP2Q13576 1575 aa11.15□□□□□ -0.62
UBXN8-201ENST00000265616 MIA2Q96PC5 1412 aa11.15□□□□□ -0.62
UBXN8-201ENST00000265616 MYT1Q01538 1121 aa11.15□□□□□ -0.62
UBXN8-201ENST00000265616 STK24Q9Y6E0 443 aa11.15□□□□□ -0.62
UBXN8-201ENST00000265616 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.62
UBXN8-201ENST00000265616 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
UBXN8-201ENST00000265616 KRTAP3-2Q9BYR7 98 aa11.14□□□□□ -0.63
UBXN8-201ENST00000265616 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
UBXN8-201ENST00000265616 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
UBXN8-201ENST00000265616 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
UBXN8-201ENST00000265616 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
UBXN8-201ENST00000265616 ERCC6L2Q5T890 1561 aa11.1□□□□□ -0.63
UBXN8-201ENST00000265616 NAIPQ13075 1403 aa11.09□□□□□ -0.63
UBXN8-201ENST00000265616 FAM50AQ14320 339 aaKnown RBP11.09□□□□□ -0.63
UBXN8-201ENST00000265616 KIF13AQ9H1H9 1805 aa11.08□□□□□ -0.64
UBXN8-201ENST00000265616 PPP1R15AO75807 674 aaPredicted RBP11.07□□□□□ -0.64
UBXN8-201ENST00000265616 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
UBXN8-201ENST00000265616 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
UBXN8-201ENST00000265616 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
UBXN8-201ENST00000265616 GRIN2AQ12879 1464 aa11.07□□□□□ -0.64
UBXN8-201ENST00000265616 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
UBXN8-201ENST00000265616 CCER2I3L3R5 266 aa11.06□□□□□ -0.64
UBXN8-201ENST00000265616 ROCK1Q13464 1354 aa11.06□□□□□ -0.64
UBXN8-201ENST00000265616 PLCG2P16885 1265 aa11.06□□□□□ -0.64
UBXN8-201ENST00000265616 EMP3P54852 163 aa11.06□□□□□ -0.64
UBXN8-201ENST00000265616 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
UBXN8-201ENST00000265616 ITGAEP38570 1179 aa11.03□□□□□ -0.64
UBXN8-201ENST00000265616 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
UBXN8-201ENST00000265616 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
UBXN8-201ENST00000265616 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
UBXN8-201ENST00000265616 KIAA0556O60303 1618 aa11.02□□□□□ -0.65
UBXN8-201ENST00000265616 NUP160Q12769 1436 aa11.02□□□□□ -0.65
UBXN8-201ENST00000265616 SHROOM2Q13796 1616 aa11.02□□□□□ -0.65
UBXN8-201ENST00000265616 PTPRKQ15262 1439 aa11.02□□□□□ -0.65
UBXN8-201ENST00000265616 MAGI3Q5TCQ9 1506 aa11.02□□□□□ -0.65
UBXN8-201ENST00000265616 HS3ST6Q96QI5 342 aa11.02□□□□□ -0.65
UBXN8-201ENST00000265616 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
UBXN8-201ENST00000265616 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
UBXN8-201ENST00000265616 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
UBXN8-201ENST00000265616 DNMT1P26358 1616 aaKnown RBP11.01□□□□□ -0.65
UBXN8-201ENST00000265616 EIF2AK3Q9NZJ5 1116 aaKnown RBP11□□□□□ -0.65
UBXN8-201ENST00000265616 ITSN2Q9NZM3 1697 aa11□□□□□ -0.65
UBXN8-201ENST00000265616 ADCY10Q96PN6 1610 aa11□□□□□ -0.65
UBXN8-201ENST00000265616 KDM5BQ9UGL1 1544 aa11□□□□□ -0.65
UBXN8-201ENST00000265616 RAPGEF6Q8TEU7 1601 aa10.99□□□□□ -0.65
UBXN8-201ENST00000265616 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
UBXN8-201ENST00000265616 SOX12O15370 315 aa10.98□□□□□ -0.65
UBXN8-201ENST00000265616 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
UBXN8-201ENST00000265616 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
UBXN8-201ENST00000265616 DISP1Q96F81 1524 aa10.97□□□□□ -0.65
UBXN8-201ENST00000265616 IRX5P78411 483 aaPredicted RBP10.97□□□□□ -0.65
UBXN8-201ENST00000265616 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
UBXN8-201ENST00000265616 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
UBXN8-201ENST00000265616 MFRPQ9BY79 579 aa10.97□□□□□ -0.65
UBXN8-201ENST00000265616 ATP1B4Q9UN42 357 aaPredicted RBP10.97□□□□□ -0.65
UBXN8-201ENST00000265616 ABCC10Q5T3U5 1492 aa10.96□□□□□ -0.65
UBXN8-201ENST00000265616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.65
UBXN8-201ENST00000265616 KDM6BO15054 1643 aa10.96□□□□□ -0.65
UBXN8-201ENST00000265616 PRG4Q92954 1404 aaPredicted RBP10.96□□□□□ -0.66
UBXN8-201ENST00000265616 POLR1AO95602 1720 aaPredicted RBP10.96□□□□□ -0.66
UBXN8-201ENST00000265616 ADGBQ8N7X0 1667 aa10.96□□□□□ -0.66
UBXN8-201ENST00000265616 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
UBXN8-201ENST00000265616 CDK11AQ9UQ88 783 aaPredicted RBP10.95□□□□□ -0.66
UBXN8-201ENST00000265616 SIN3AQ96ST3 1273 aa10.94□□□□□ -0.66
UBXN8-201ENST00000265616 ADGRL2O95490 1459 aa10.94□□□□□ -0.66
UBXN8-201ENST00000265616 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
UBXN8-201ENST00000265616 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
UBXN8-201ENST00000265616 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
UBXN8-201ENST00000265616 NUP153P49790 1475 aaKnown RBP10.93□□□□□ -0.66
UBXN8-201ENST00000265616 DAPK1P53355 1430 aa10.93□□□□□ -0.66
UBXN8-201ENST00000265616 KDM4FA0A1W2PPD8 638 aa10.93□□□□□ -0.66
UBXN8-201ENST00000265616 ANP32CO43423 234 aa10.93□□□□□ -0.66
UBXN8-201ENST00000265616 NLRP6P59044 892 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms