RNA–Protein interactions for RNA: ENST00000263563.6

PALD1-201, Transcript of phosphatase domain containing, paladin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALD1, Length 4,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALD1-201ENST00000263563 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
PALD1-201ENST00000263563 KIF3BO15066 747 aa18.67■□□□□ 0.58
PALD1-201ENST00000263563 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
PALD1-201ENST00000263563 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
PALD1-201ENST00000263563 CDK11BP21127 795 aaKnown RBP18.66■□□□□ 0.58
PALD1-201ENST00000263563 ITPRIPQ8IWB1 547 aa18.66■□□□□ 0.58
PALD1-201ENST00000263563 BCL2L13Q9BXK5 485 aa18.66■□□□□ 0.58
PALD1-201ENST00000263563 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
PALD1-201ENST00000263563 CCDC184Q52MB2 194 aa18.65■□□□□ 0.58
PALD1-201ENST00000263563 FGD6Q6ZV73 1430 aa18.64■□□□□ 0.58
PALD1-201ENST00000263563 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
PALD1-201ENST00000263563 ZNF644Q9H582 1327 aaPredicted RBP18.63■□□□□ 0.57
PALD1-201ENST00000263563 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
PALD1-201ENST00000263563 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
PALD1-201ENST00000263563 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
PALD1-201ENST00000263563 MYOM3Q5VTT5 1437 aa18.62■□□□□ 0.57
PALD1-201ENST00000263563 LAMC3Q9Y6N6 1575 aa18.62■□□□□ 0.57
PALD1-201ENST00000263563 TAOK2Q9UL54 1235 aa18.61■□□□□ 0.57
PALD1-201ENST00000263563 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
PALD1-201ENST00000263563 COG6Q9Y2V7 657 aa18.61■□□□□ 0.57
PALD1-201ENST00000263563 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
PALD1-201ENST00000263563 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
PALD1-201ENST00000263563 POGKQ9P215 609 aa18.61■□□□□ 0.57
PALD1-201ENST00000263563 ZRSR1Q15695 479 aaKnown RBP18.6■□□□□ 0.57
PALD1-201ENST00000263563 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
PALD1-201ENST00000263563 CENPJQ9HC77 1338 aaPredicted RBP18.6■□□□□ 0.57
PALD1-201ENST00000263563 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
PALD1-201ENST00000263563 KIF15Q9NS87 1388 aa18.6■□□□□ 0.57
PALD1-201ENST00000263563 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
PALD1-201ENST00000263563 PANK3Q9H999 370 aa18.59■□□□□ 0.57
PALD1-201ENST00000263563 CYB5RLQ6IPT4 315 aa18.58■□□□□ 0.57
PALD1-201ENST00000263563 AKNAQ7Z591 1439 aa18.58■□□□□ 0.56
PALD1-201ENST00000263563 CALD1Q05682 793 aaKnown RBP18.57■□□□□ 0.56
PALD1-201ENST00000263563 CCDC7Q96M83 1385 aa18.57■□□□□ 0.56
PALD1-201ENST00000263563 SMC4Q9NTJ3 1288 aa18.57■□□□□ 0.56
PALD1-201ENST00000263563 FYCO1Q9BQS8 1478 aa18.57■□□□□ 0.56
PALD1-201ENST00000263563 CHMP4BQ9H444 224 aaKnown RBP18.56■□□□□ 0.56
PALD1-201ENST00000263563 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
PALD1-201ENST00000263563 USP47Q96K76 1375 aa18.56■□□□□ 0.56
PALD1-201ENST00000263563 NCOA2Q15596 1464 aa18.56■□□□□ 0.56
PALD1-201ENST00000263563 KIAA2012Q0VF49 1180 aa18.55■□□□□ 0.56
PALD1-201ENST00000263563 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
PALD1-201ENST00000263563 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
PALD1-201ENST00000263563 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
PALD1-201ENST00000263563 GOLGA6L4A6NEF3 574 aa18.54■□□□□ 0.56
PALD1-201ENST00000263563 DRC7Q8IY82 874 aa18.54■□□□□ 0.56
PALD1-201ENST00000263563 EFCAB5A4FU69 1503 aa18.54■□□□□ 0.56
PALD1-201ENST00000263563 APAF1O14727 1248 aa18.52■□□□□ 0.56
PALD1-201ENST00000263563 DDX49Q9Y6V7 483 aaKnown RBP18.52■□□□□ 0.56
PALD1-201ENST00000263563 KCNJ4P48050 445 aa18.52■□□□□ 0.56
PALD1-201ENST00000263563 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.55
PALD1-201ENST00000263563 IPO8O15397 1037 aaKnown RBP18.52■□□□□ 0.55
PALD1-201ENST00000263563 NOL8Q76FK4 1167 aaKnown RBP18.52■□□□□ 0.55
PALD1-201ENST00000263563 PRDM2Q13029 1718 aa18.5■□□□□ 0.55
PALD1-201ENST00000263563 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
PALD1-201ENST00000263563 RRBP1Q9P2E9 1410 aaKnown RBP18.5■□□□□ 0.55
PALD1-201ENST00000263563 DDX11L8A8MPP1 907 aa18.49■□□□□ 0.55
PALD1-201ENST00000263563 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
PALD1-201ENST00000263563 SRPK2P78362 688 aaKnown RBP18.49■□□□□ 0.55
PALD1-201ENST00000263563 FAM13BQ9NYF5 915 aa18.49■□□□□ 0.55
PALD1-201ENST00000263563 LMOD2Q6P5Q4 547 aa18.48■□□□□ 0.55
PALD1-201ENST00000263563 SOX12O15370 315 aa18.48■□□□□ 0.55
PALD1-201ENST00000263563 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
PALD1-201ENST00000263563 BACH2Q9BYV9 841 aa18.48■□□□□ 0.55
PALD1-201ENST00000263563 FGD1P98174 961 aa18.47■□□□□ 0.55
PALD1-201ENST00000263563 PTMSP20962 102 aa18.47■□□□□ 0.55
PALD1-201ENST00000263563 FOXD4L6Q3SYB3 417 aaPredicted RBP18.47■□□□□ 0.55
PALD1-201ENST00000263563 FOXD4L3Q6VB84 417 aaPredicted RBP18.47■□□□□ 0.55
PALD1-201ENST00000263563 OS9Q13438 667 aaPredicted RBP18.47■□□□□ 0.55
PALD1-201ENST00000263563 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
PALD1-201ENST00000263563 NAP1L2Q9ULW6 460 aaPredicted RBP18.45■□□□□ 0.54
PALD1-201ENST00000263563 STK26Q9P289 416 aa18.45■□□□□ 0.54
PALD1-201ENST00000263563 SKAP1Q86WV1 359 aa18.45■□□□□ 0.54
PALD1-201ENST00000263563 MCCP23508 829 aa18.45■□□□□ 0.54
PALD1-201ENST00000263563 CGNL1Q0VF96 1302 aa18.44■□□□□ 0.54
PALD1-201ENST00000263563 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
PALD1-201ENST00000263563 KIAA0586Q9BVV6 1533 aa18.43■□□□□ 0.54
PALD1-201ENST00000263563 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
PALD1-201ENST00000263563 CHMP5Q9NZZ3 219 aa18.42■□□□□ 0.54
PALD1-201ENST00000263563 FAM43AQ8N2R8 423 aa18.41■□□□□ 0.54
PALD1-201ENST00000263563 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
PALD1-201ENST00000263563 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
PALD1-201ENST00000263563 TIAM1Q13009 1591 aa18.4■□□□□ 0.54
PALD1-201ENST00000263563 BIVM-ERCC5R4GMW8 1640 aa18.4■□□□□ 0.54
PALD1-201ENST00000263563 E9PSI1 815 aa18.39■□□□□ 0.54
PALD1-201ENST00000263563 PANK1Q8TE04 598 aa18.39■□□□□ 0.54
PALD1-201ENST00000263563 WDR97A6NE52 1622 aa18.39■□□□□ 0.53
PALD1-201ENST00000263563 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
PALD1-201ENST00000263563 SYAP1Q96A49 352 aaPredicted RBP18.38■□□□□ 0.53
PALD1-201ENST00000263563 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
PALD1-201ENST00000263563 NRDCO43847 1150 aa18.37■□□□□ 0.53
PALD1-201ENST00000263563 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
PALD1-201ENST00000263563 PKNOX2Q96KN3 472 aa18.37■□□□□ 0.53
PALD1-201ENST00000263563 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
PALD1-201ENST00000263563 GOLGA6L6A8MZA4 724 aa18.36■□□□□ 0.53
PALD1-201ENST00000263563 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
PALD1-201ENST00000263563 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
PALD1-201ENST00000263563 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
PALD1-201ENST00000263563 NBPF8Q3BBV2 869 aa18.35■□□□□ 0.53
PALD1-201ENST00000263563 PNISRQ8TF01 805 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms