RNA–Protein interactions for RNA: ENST00000263563.6

PALD1-201, Transcript of phosphatase domain containing, paladin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALD1, Length 4,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALD1-201ENST00000263563 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
PALD1-201ENST00000263563 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
PALD1-201ENST00000263563 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
PALD1-201ENST00000263563 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
PALD1-201ENST00000263563 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
PALD1-201ENST00000263563 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
PALD1-201ENST00000263563 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
PALD1-201ENST00000263563 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
PALD1-201ENST00000263563 TTBK1Q5TCY1 1321 aaPredicted RBP23.03■■□□□ 1.28
PALD1-201ENST00000263563 HRCP23327 699 aa23.02■■□□□ 1.28
PALD1-201ENST00000263563 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
PALD1-201ENST00000263563 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
PALD1-201ENST00000263563 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
PALD1-201ENST00000263563 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
PALD1-201ENST00000263563 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.21
PALD1-201ENST00000263563 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
PALD1-201ENST00000263563 APLP2Q06481 763 aa22.52■■□□□ 1.19
PALD1-201ENST00000263563 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
PALD1-201ENST00000263563 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
PALD1-201ENST00000263563 MYT1Q01538 1121 aa22.5■■□□□ 1.19
PALD1-201ENST00000263563 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
PALD1-201ENST00000263563 RANGAP1P46060 587 aaPredicted RBP22.3■■□□□ 1.16
PALD1-201ENST00000263563 ABCC9O60706 1549 aa22.24■■□□□ 1.15
PALD1-201ENST00000263563 ERICH6Q7L0X2 663 aa22.23■■□□□ 1.15
PALD1-201ENST00000263563 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
PALD1-201ENST00000263563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
PALD1-201ENST00000263563 NEFLP07196 543 aa21.94■■□□□ 1.1
PALD1-201ENST00000263563 DIEXFQ68CQ4 756 aaKnown RBP21.91■■□□□ 1.1
PALD1-201ENST00000263563 GTF3C3Q9Y5Q9 886 aa21.91■■□□□ 1.1
PALD1-201ENST00000263563 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
PALD1-201ENST00000263563 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.07
PALD1-201ENST00000263563 HNRNPUL2Q1KMD3 747 aaKnown RBP21.75■■□□□ 1.07
PALD1-201ENST00000263563 CCDC180Q9P1Z9 1646 aa21.74■■□□□ 1.07
PALD1-201ENST00000263563 ATP1B4Q9UN42 357 aaPredicted RBP21.7■■□□□ 1.06
PALD1-201ENST00000263563 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
PALD1-201ENST00000263563 ITGAEP38570 1179 aa21.57■■□□□ 1.04
PALD1-201ENST00000263563 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
PALD1-201ENST00000263563 BCANQ96GW7 911 aa21.45■■□□□ 1.02
PALD1-201ENST00000263563 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
PALD1-201ENST00000263563 NEUROD1Q13562 356 aa21.35■■□□□ 1.01
PALD1-201ENST00000263563 CNGB1Q14028 1251 aaPredicted RBP21.3■■□□□ 1
PALD1-201ENST00000263563 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
PALD1-201ENST00000263563 POLR3GLQ9BT43 218 aa21.17■□□□□ 0.98
PALD1-201ENST00000263563 RTL5Q5HYW3 569 aaPredicted RBP21.03■□□□□ 0.96
PALD1-201ENST00000263563 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
PALD1-201ENST00000263563 DAXXQ9UER7 740 aaPredicted RBP21.02■□□□□ 0.96
PALD1-201ENST00000263563 MYO15BQ96JP2 1530 aa21.01■□□□□ 0.95
PALD1-201ENST00000263563 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
PALD1-201ENST00000263563 NACADO15069 1562 aa20.96■□□□□ 0.95
PALD1-201ENST00000263563 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
PALD1-201ENST00000263563 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.93
PALD1-201ENST00000263563 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.92
PALD1-201ENST00000263563 FKBP8Q14318 412 aa20.83■□□□□ 0.92
PALD1-201ENST00000263563 MIER1Q8N108 512 aa20.83■□□□□ 0.92
PALD1-201ENST00000263563 ANP32CO43423 234 aa20.81■□□□□ 0.92
PALD1-201ENST00000263563 CSRNP3Q8WYN3 585 aa20.78■□□□□ 0.92
PALD1-201ENST00000263563 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
PALD1-201ENST00000263563 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
PALD1-201ENST00000263563 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
PALD1-201ENST00000263563 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
PALD1-201ENST00000263563 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
PALD1-201ENST00000263563 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
PALD1-201ENST00000263563 FBLN2P98095 1184 aa20.48■□□□□ 0.87
PALD1-201ENST00000263563 HNRNPUQ00839 825 aaKnown RBP eCLIP20.48■□□□□ 0.87
PALD1-201ENST00000263563 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
PALD1-201ENST00000263563 NBR1Q14596 966 aa20.47■□□□□ 0.87
PALD1-201ENST00000263563 EIF5BO60841 1220 aaKnown RBP20.46■□□□□ 0.87
PALD1-201ENST00000263563 ANP32AP39687 249 aaKnown RBP20.46■□□□□ 0.87
PALD1-201ENST00000263563 ANP32EQ9BTT0 268 aa20.45■□□□□ 0.86
PALD1-201ENST00000263563 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
PALD1-201ENST00000263563 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
PALD1-201ENST00000263563 P3H3Q8IVL6 736 aa20.44■□□□□ 0.86
PALD1-201ENST00000263563 HIRIP3Q9BW71 556 aaPredicted RBP20.39■□□□□ 0.85
PALD1-201ENST00000263563 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.85
PALD1-201ENST00000263563 FAM9BQ8IZU0 186 aa20.32■□□□□ 0.84
PALD1-201ENST00000263563 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
PALD1-201ENST00000263563 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
PALD1-201ENST00000263563 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
PALD1-201ENST00000263563 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
PALD1-201ENST00000263563 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
PALD1-201ENST00000263563 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
PALD1-201ENST00000263563 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
PALD1-201ENST00000263563 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
PALD1-201ENST00000263563 CCDC136Q96JN2 1154 aa20.17■□□□□ 0.82
PALD1-201ENST00000263563 TONSLQ96HA7 1378 aa20.16■□□□□ 0.82
PALD1-201ENST00000263563 EEA1Q15075 1411 aa20.14■□□□□ 0.81
PALD1-201ENST00000263563 SENP3-EIF4A1A0A087X0R7 540 aa20.08■□□□□ 0.8
PALD1-201ENST00000263563 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
PALD1-201ENST00000263563 MRS2Q9HD23 443 aa20.07■□□□□ 0.8
PALD1-201ENST00000263563 CLIP1P30622 1438 aa20.06■□□□□ 0.8
PALD1-201ENST00000263563 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
PALD1-201ENST00000263563 ARXQ96QS3 562 aa20.02■□□□□ 0.8
PALD1-201ENST00000263563 GOLGA3Q08378 1498 aa20.01■□□□□ 0.79
PALD1-201ENST00000263563 CANXP27824 592 aaKnown RBP20■□□□□ 0.79
PALD1-201ENST00000263563 RTN4Q9NQC3 1192 aaKnown RBP20■□□□□ 0.79
PALD1-201ENST00000263563 WIZO95785 1651 aa19.98■□□□□ 0.79
PALD1-201ENST00000263563 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
PALD1-201ENST00000263563 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
PALD1-201ENST00000263563 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
PALD1-201ENST00000263563 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms