RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 YEATS2Q9ULM3 1422 aa33.3■■■□□ 2.92
UFD1-201ENST00000263202 NUP155O75694 1391 aa33.3■■■□□ 2.92
UFD1-201ENST00000263202 DEPDC5O75140 1603 aa33.3■■■□□ 2.92
UFD1-201ENST00000263202 SLC4A1APQ9BWU0 796 aaKnown RBP33.26■■■□□ 2.92
UFD1-201ENST00000263202 IQGAP3Q86VI3 1631 aa33.26■■■□□ 2.91
UFD1-201ENST00000263202 BCORL1Q5H9F3 1711 aa33.25■■■□□ 2.91
UFD1-201ENST00000263202 FAM135AQ9P2D6 1515 aa33.24■■■□□ 2.91
UFD1-201ENST00000263202 KIF3BO15066 747 aa33.2■■■□□ 2.91
UFD1-201ENST00000263202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.2■■■□□ 2.911e-6■■□□□ 11.7
UFD1-201ENST00000263202 MROH1Q8NDA8 1641 aa33.2■■■□□ 2.9
UFD1-201ENST00000263202 RNF17Q9BXT8 1623 aaKnown RBP33.2■■■□□ 2.9
UFD1-201ENST00000263202 ATP10AO60312 1499 aa33.17■■■□□ 2.9
UFD1-201ENST00000263202 PRDM15P57071 1507 aaPredicted RBP33.17■■■□□ 2.9
UFD1-201ENST00000263202 ARHGEF40Q8TER5 1519 aa33.17■■■□□ 2.9
UFD1-201ENST00000263202 REREQ9P2R6 1566 aa33.16■■■□□ 2.9
UFD1-201ENST00000263202 FOXD1Q16676 465 aa33.14■■■□□ 2.9
UFD1-201ENST00000263202 VWDEQ8N2E2 1590 aa33.14■■■□□ 2.9
UFD1-201ENST00000263202 PKD2Q13563 968 aa33.13■■■□□ 2.89
UFD1-201ENST00000263202 SIN3AQ96ST3 1273 aa33.12■■■□□ 2.89
UFD1-201ENST00000263202 ANKRD30BQ9BXX2 1392 aa33.08■■■□□ 2.89
UFD1-201ENST00000263202 KANK1Q14678 1352 aa33.08■■■□□ 2.89
UFD1-201ENST00000263202 SIGLEC1Q9BZZ2 1709 aa33.06■■■□□ 2.88
UFD1-201ENST00000263202 TET3O43151 1660 aa33.05■■■□□ 2.88
UFD1-201ENST00000263202 AGLP35573 1532 aa33.04■■■□□ 2.88
UFD1-201ENST00000263202 CEP152O94986 1710 aa33.03■■■□□ 2.88
UFD1-201ENST00000263202 NEUROD1Q13562 356 aa33.03■■■□□ 2.88
UFD1-201ENST00000263202 E9PCH4 1651 aa33.01■■■□□ 2.88
UFD1-201ENST00000263202 GGT6Q6P531 493 aa33■■■□□ 2.87
UFD1-201ENST00000263202 LMTK2Q8IWU2 1503 aa32.99■■■□□ 2.87
UFD1-201ENST00000263202 ZC3H13Q5T200 1668 aaKnown RBP32.93■■■□□ 2.86
UFD1-201ENST00000263202 EFCAB6Q5THR3 1501 aa32.93■■■□□ 2.86
UFD1-201ENST00000263202 ABCC3O15438 1527 aa32.93■■■□□ 2.86
UFD1-201ENST00000263202 RPRD2Q5VT52 1461 aaKnown RBP32.92■■■□□ 2.86
UFD1-201ENST00000263202 TIMELESSQ9UNS1 1208 aa32.91■■■□□ 2.86
UFD1-201ENST00000263202 CAMSAP1Q5T5Y3 1602 aa32.88■■■□□ 2.85
UFD1-201ENST00000263202 PLA2R1Q13018 1463 aa32.88■■■□□ 2.85
UFD1-201ENST00000263202 SPHKAPQ2M3C7 1700 aa32.88■■■□□ 2.85
UFD1-201ENST00000263202 WASHC2CQ9Y4E1 1318 aa32.87■■■□□ 2.85
UFD1-201ENST00000263202 TONSLQ96HA7 1378 aa32.85■■■□□ 2.85
UFD1-201ENST00000263202 PTPRTO14522 1441 aa32.81■■■□□ 2.84
UFD1-201ENST00000263202 PPP6R1Q9UPN7 881 aa32.79■■■□□ 2.84
UFD1-201ENST00000263202 TRPM2O94759 1503 aa32.79■■■□□ 2.84
UFD1-201ENST00000263202 CCDC144AA2RUR9 1427 aa32.78■■■□□ 2.84
UFD1-201ENST00000263202 NPATQ14207 1427 aa32.77■■■□□ 2.84
UFD1-201ENST00000263202 CLTCQ00610 1675 aaKnown RBP32.76■■■□□ 2.84
UFD1-201ENST00000263202 CFAP65Q6ZU64 1925 aaKnown RBP32.76■■■□□ 2.83
UFD1-201ENST00000263202 ARHGAP31Q2M1Z3 1444 aa32.75■■■□□ 2.83
UFD1-201ENST00000263202 MLECQ14165 292 aa32.74■■■□□ 2.83
UFD1-201ENST00000263202 ARID4BQ4LE39 1312 aaPredicted RBP32.73■■■□□ 2.83
UFD1-201ENST00000263202 CLTCL1P53675 1640 aa32.71■■■□□ 2.83
UFD1-201ENST00000263202 PPP1R15AO75807 674 aaPredicted RBP32.7■■■□□ 2.82
UFD1-201ENST00000263202 L3MBTL2Q969R5 705 aa32.69■■■□□ 2.82
UFD1-201ENST00000263202 PREX1Q8TCU6 1659 aa32.65■■■□□ 2.82
UFD1-201ENST00000263202 NOS1P29475 1434 aa32.64■■■□□ 2.82
UFD1-201ENST00000263202 CNTLNQ9NXG0 1405 aa32.64■■■□□ 2.82
UFD1-201ENST00000263202 UGGT1Q9NYU2 1555 aa32.62■■■□□ 2.81
UFD1-201ENST00000263202 SYNMO15061 1565 aa32.6■■■□□ 2.81
UFD1-201ENST00000263202 KIF1BO60333 1816 aa32.59■■■□□ 2.81
UFD1-201ENST00000263202 MROH2AA6NES4 1674 aa32.58■■■□□ 2.81
UFD1-201ENST00000263202 ESF1Q9H501 851 aaKnown RBP32.57■■■□□ 2.8
UFD1-201ENST00000263202 SPATA31E1Q6ZUB1 1445 aa32.57■■■□□ 2.8
UFD1-201ENST00000263202 PIK3C2BO00750 1634 aa32.57■■■□□ 2.8
UFD1-201ENST00000263202 FER1L4A9Z1Z3 1794 aa32.55■■■□□ 2.8
UFD1-201ENST00000263202 NEURL4Q96JN8 1562 aa32.54■■■□□ 2.8
UFD1-201ENST00000263202 ERVK-7P63135 1459 aa32.53■■■□□ 2.8
UFD1-201ENST00000263202 ZMYM3Q14202 1370 aa32.52■■■□□ 2.8
UFD1-201ENST00000263202 SPATA31D1Q6ZQQ2 1576 aa32.5■■■□□ 2.79
UFD1-201ENST00000263202 RGL3Q3MIN7 710 aa32.5■■■□□ 2.79
UFD1-201ENST00000263202 FBXO31Q5XUX0 539 aaPredicted RBP32.49■■■□□ 2.79
UFD1-201ENST00000263202 ADGRB3O60242 1522 aa32.46■■■□□ 2.79
UFD1-201ENST00000263202 DCAF11Q8TEB1 546 aa32.46■■■□□ 2.79
UFD1-201ENST00000263202 NBPF8Q3BBV2 869 aa32.44■■■□□ 2.78
UFD1-201ENST00000263202 UHRF1BP1Q6BDS2 1440 aa32.43■■■□□ 2.78
UFD1-201ENST00000263202 C3P01024 1663 aa32.42■■■□□ 2.78
UFD1-201ENST00000263202 SLC52A1Q9NWF4 448 aa32.42■■■□□ 2.78
UFD1-201ENST00000263202 KDM2AQ9Y2K7 1162 aa32.4■■■□□ 2.78
UFD1-201ENST00000263202 IFT172Q9UG01 1749 aa32.4■■■□□ 2.78
UFD1-201ENST00000263202 ADAMTSL3P82987 1691 aa32.4■■■□□ 2.78
UFD1-201ENST00000263202 MADDQ8WXG6 1647 aa32.4■■■□□ 2.78
UFD1-201ENST00000263202 IDI1Q13907 227 aa32.39■■■□□ 2.78
UFD1-201ENST00000263202 MYO5BQ9ULV0 1848 aa32.36■■■□□ 2.77
UFD1-201ENST00000263202 RIMS1Q86UR5 1692 aaKnown RBP32.35■■■□□ 2.77
UFD1-201ENST00000263202 TMEM131LA2VDJ0 1609 aa32.35■■■□□ 2.77
UFD1-201ENST00000263202 CHGAP10645 457 aaKnown RBP32.35■■■□□ 2.77
UFD1-201ENST00000263202 PRAG1Q86YV5 1406 aa32.34■■■□□ 2.77
UFD1-201ENST00000263202 ZNF326Q5BKZ1 582 aaKnown RBP32.33■■■□□ 2.77
UFD1-201ENST00000263202 PPLO60437 1756 aa32.32■■■□□ 2.76
UFD1-201ENST00000263202 STAC3Q96MF2 364 aa32.3■■■□□ 2.76
UFD1-201ENST00000263202 TRPM1Q7Z4N2 1603 aa32.29■■■□□ 2.76
UFD1-201ENST00000263202 CEBPAP49715 358 aaPredicted RBP32.29■■■□□ 2.76
UFD1-201ENST00000263202 TNRQ92752 1358 aa32.29■■■□□ 2.76
UFD1-201ENST00000263202 RALGAPBQ86X10 1494 aa32.28■■■□□ 2.76
UFD1-201ENST00000263202 ZNF316A6NFI3 1004 aaPredicted RBP32.27■■■□□ 2.76
UFD1-201ENST00000263202 MYOM2P54296 1465 aa32.27■■■□□ 2.76
UFD1-201ENST00000263202 RPGRIP1LQ68CZ1 1315 aa32.24■■■□□ 2.75
UFD1-201ENST00000263202 NEXMIFQ5QGS0 1516 aa32.23■■■□□ 2.75
UFD1-201ENST00000263202 KDM5AP29375 1690 aaKnown RBP32.21■■■□□ 2.75
UFD1-201ENST00000263202 A2ML1A8K2U0 1454 aa32.19■■■□□ 2.74
UFD1-201ENST00000263202 NRXN1Q9ULB1 1477 aa32.19■■■□□ 2.74
UFD1-201ENST00000263202 NLRP1Q9C000 1473 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms