RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 FAM69CQ0P6D2 419 aa32.02■■■□□ 2.72
SIX3-201ENST00000260653 DHX29Q7Z478 1369 aaKnown RBP31.97■■■□□ 2.71
SIX3-201ENST00000260653 DEPDC5O75140 1603 aa31.96■■■□□ 2.71
SIX3-201ENST00000260653 HECW2Q9P2P5 1572 aa31.96■■■□□ 2.71
SIX3-201ENST00000260653 MLH3Q9UHC1 1453 aa31.95■■■□□ 2.71
SIX3-201ENST00000260653 RAPGEF3O95398 923 aa31.94■■■□□ 2.7
SIX3-201ENST00000260653 EIF2AK4Q9P2K8 1649 aaKnown RBP31.93■■■□□ 2.7
SIX3-201ENST00000260653 KIF3BO15066 747 aa31.9■■■□□ 2.7
SIX3-201ENST00000260653 TSPOAP1O95153 1857 aa31.9■■■□□ 2.7
SIX3-201ENST00000260653 RICTORQ6R327 1708 aa31.9■■■□□ 2.7
SIX3-201ENST00000260653 A2MP01023 1474 aa31.88■■■□□ 2.69
SIX3-201ENST00000260653 PLA2R1Q13018 1463 aa31.88■■■□□ 2.69
SIX3-201ENST00000260653 ABCA6Q8N139 1617 aa31.87■■■□□ 2.69
SIX3-201ENST00000260653 PPRC1Q5VV67 1664 aaKnown RBP31.87■■■□□ 2.69
SIX3-201ENST00000260653 MROH1Q8NDA8 1641 aa31.85■■■□□ 2.69
SIX3-201ENST00000260653 FRMPD1Q5SYB0 1578 aa31.85■■■□□ 2.69
SIX3-201ENST00000260653 PRDM15P57071 1507 aaPredicted RBP31.84■■■□□ 2.69
SIX3-201ENST00000260653 HIRIP3Q9BW71 556 aaPredicted RBP31.84■■■□□ 2.69
SIX3-201ENST00000260653 VWDEQ8N2E2 1590 aa31.84■■■□□ 2.69
SIX3-201ENST00000260653 NBPF8Q3BBV2 869 aa31.83■■■□□ 2.69
SIX3-201ENST00000260653 CCDC144AA2RUR9 1427 aa31.83■■■□□ 2.69
SIX3-201ENST00000260653 E9PCH4 1651 aa31.82■■■□□ 2.68
SIX3-201ENST00000260653 KIF13AQ9H1H9 1805 aa31.81■■■□□ 2.68
SIX3-201ENST00000260653 KANK1Q14678 1352 aa31.8■■■□□ 2.68
SIX3-201ENST00000260653 ATP10AO60312 1499 aa31.78■■■□□ 2.68
SIX3-201ENST00000260653 TET3O43151 1660 aa31.78■■■□□ 2.68
SIX3-201ENST00000260653 DIP2CQ9Y2E4 1556 aa31.77■■■□□ 2.68
SIX3-201ENST00000260653 MYT1Q01538 1121 aa31.76■■■□□ 2.68
SIX3-201ENST00000260653 RNF17Q9BXT8 1623 aaKnown RBP31.76■■■□□ 2.67
SIX3-201ENST00000260653 YEATS2Q9ULM3 1422 aa31.72■■■□□ 2.67
SIX3-201ENST00000260653 BCORL1Q5H9F3 1711 aa31.7■■■□□ 2.67
SIX3-201ENST00000260653 ZNF326Q5BKZ1 582 aaKnown RBP31.69■■■□□ 2.66
SIX3-201ENST00000260653 ZMYM4Q5VZL5 1548 aa31.68■■■□□ 2.66
SIX3-201ENST00000260653 SPHKAPQ2M3C7 1700 aa31.68■■■□□ 2.66
SIX3-201ENST00000260653 CEP152O94986 1710 aa31.66■■■□□ 2.66
SIX3-201ENST00000260653 MIER1Q8N108 512 aa31.66■■■□□ 2.66
SIX3-201ENST00000260653 TRPM2O94759 1503 aa31.66■■■□□ 2.66
SIX3-201ENST00000260653 HSPA5P11021 654 aaKnown RBP31.66■■■□□ 2.66
SIX3-201ENST00000260653 PTPRTO14522 1441 aa31.65■■■□□ 2.66
SIX3-201ENST00000260653 UHRF1BP1Q6BDS2 1440 aa31.65■■■□□ 2.66
SIX3-201ENST00000260653 DCAF11Q8TEB1 546 aa31.65■■■□□ 2.66
SIX3-201ENST00000260653 EFCAB6Q5THR3 1501 aa31.65■■■□□ 2.66
SIX3-201ENST00000260653 GGT6Q6P531 493 aa31.64■■■□□ 2.66
SIX3-201ENST00000260653 EIF4G2P78344 907 aaKnown RBP eCLIP31.64■■■□□ 2.65
SIX3-201ENST00000260653 LMTK2Q8IWU2 1503 aa31.63■■■□□ 2.65
SIX3-201ENST00000260653 KDM2AQ9Y2K7 1162 aa31.63■■■□□ 2.65
SIX3-201ENST00000260653 RGL3Q3MIN7 710 aa31.63■■■□□ 2.65
SIX3-201ENST00000260653 CLTCL1P53675 1640 aa31.58■■■□□ 2.65
SIX3-201ENST00000260653 DDX10Q13206 875 aaKnown RBP31.56■■■□□ 2.64
SIX3-201ENST00000260653 RALGAPBQ86X10 1494 aa31.56■■■□□ 2.64
SIX3-201ENST00000260653 SPATA31E1Q6ZUB1 1445 aa31.55■■■□□ 2.64
SIX3-201ENST00000260653 COL17A1Q9UMD9 1497 aaPredicted RBP31.54■■■□□ 2.64
SIX3-201ENST00000260653 ABCC3O15438 1527 aa31.54■■■□□ 2.64
SIX3-201ENST00000260653 WASHC2CQ9Y4E1 1318 aa31.51■■■□□ 2.63
SIX3-201ENST00000260653 PRAG1Q86YV5 1406 aa31.5■■■□□ 2.63
SIX3-201ENST00000260653 NPATQ14207 1427 aa31.49■■■□□ 2.63
SIX3-201ENST00000260653 UGGT1Q9NYU2 1555 aa31.49■■■□□ 2.63
SIX3-201ENST00000260653 CAMSAP1Q5T5Y3 1602 aa31.47■■■□□ 2.63
SIX3-201ENST00000260653 CFAP65Q6ZU64 1925 aaKnown RBP31.45■■■□□ 2.63
SIX3-201ENST00000260653 USP47Q96K76 1375 aa31.45■■■□□ 2.63
SIX3-201ENST00000260653 TRPM1Q7Z4N2 1603 aa31.44■■■□□ 2.62
SIX3-201ENST00000260653 WASHC2AQ641Q2 1341 aa31.43■■■□□ 2.62
SIX3-201ENST00000260653 REREQ9P2R6 1566 aa31.42■■■□□ 2.62
SIX3-201ENST00000260653 CARD11Q9BXL7 1154 aa31.41■■■□□ 2.62
SIX3-201ENST00000260653 ZC3H13Q5T200 1668 aaKnown RBP31.41■■■□□ 2.62
SIX3-201ENST00000260653 ROCK2O75116 1388 aaKnown RBP31.39■■■□□ 2.62
SIX3-201ENST00000260653 C11orf95C9JLR9 678 aaPredicted RBP31.38■■■□□ 2.61
SIX3-201ENST00000260653 ARHGEF40Q8TER5 1519 aa31.38■■■□□ 2.61
SIX3-201ENST00000260653 KIF1BO60333 1816 aa31.37■■■□□ 2.61
SIX3-201ENST00000260653 SIGLEC1Q9BZZ2 1709 aa31.37■■■□□ 2.61
SIX3-201ENST00000260653 NEURL4Q96JN8 1562 aa31.36■■■□□ 2.61
SIX3-201ENST00000260653 AGLP35573 1532 aa31.35■■■□□ 2.61
SIX3-201ENST00000260653 CNTLNQ9NXG0 1405 aa31.35■■■□□ 2.61
SIX3-201ENST00000260653 NBPF1Q3BBV0 1214 aa31.33■■■□□ 2.61
SIX3-201ENST00000260653 MROH2AA6NES4 1674 aa31.33■■■□□ 2.61
SIX3-201ENST00000260653 MADDQ8WXG6 1647 aa31.32■■■□□ 2.6
SIX3-201ENST00000260653 CCDC7Q96M83 1385 aa31.32■■■□□ 2.6
SIX3-201ENST00000260653 ARHGAP31Q2M1Z3 1444 aa31.32■■■□□ 2.6
SIX3-201ENST00000260653 POLR1AO95602 1720 aaPredicted RBP31.31■■■□□ 2.6
SIX3-201ENST00000260653 NOS1P29475 1434 aa31.31■■■□□ 2.6
SIX3-201ENST00000260653 GPRASP1Q5JY77 1395 aa31.3■■■□□ 2.6
SIX3-201ENST00000260653 SYNMO15061 1565 aa31.27■■■□□ 2.6
SIX3-201ENST00000260653 ADGRB3O60242 1522 aa31.27■■■□□ 2.6
SIX3-201ENST00000260653 KIF7Q2M1P5 1343 aa31.26■■■□□ 2.6
SIX3-201ENST00000260653 LAMC1P11047 1609 aa31.25■■■□□ 2.59
SIX3-201ENST00000260653 STAC3Q96MF2 364 aa31.24■■■□□ 2.59
SIX3-201ENST00000260653 ST20-MTHFSA0A0A6YYL1 179 aa31.23■■■□□ 2.59
SIX3-201ENST00000260653 TRHP20396 242 aaPredicted RBP31.23■■■□□ 2.59
SIX3-201ENST00000260653 IFT172Q9UG01 1749 aa31.22■■■□□ 2.59
SIX3-201ENST00000260653 PIK3C2BO00750 1634 aa31.22■■■□□ 2.59
SIX3-201ENST00000260653 CHGAP10645 457 aaKnown RBP31.22■■■□□ 2.59
SIX3-201ENST00000260653 MYOM2P54296 1465 aa31.2■■■□□ 2.58
SIX3-201ENST00000260653 PREX1Q8TCU6 1659 aa31.2■■■□□ 2.58
SIX3-201ENST00000260653 MLECQ14165 292 aa31.19■■■□□ 2.58
SIX3-201ENST00000260653 CLTCQ00610 1675 aaKnown RBP31.18■■■□□ 2.58
SIX3-201ENST00000260653 PPP6R1Q9UPN7 881 aa31.17■■■□□ 2.58
SIX3-201ENST00000260653 YTHDC1Q96MU7 727 aaKnown RBP31.17■■■□□ 2.58
SIX3-201ENST00000260653 ADGRF5Q8IZF2 1346 aa31.14■■■□□ 2.58
SIX3-201ENST00000260653 ANP32CO43423 234 aa31.14■■■□□ 2.58
SIX3-201ENST00000260653 DNAJC5Q9H3Z4 198 aa31.14■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms