RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 ABCA6Q8N139 1617 aa24.34■■□□□ 1.49
HLA-F-216ENST00000259951 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
HLA-F-216ENST00000259951 FAM135AQ9P2D6 1515 aa24.34■■□□□ 1.49
HLA-F-216ENST00000259951 DEPDC5O75140 1603 aa24.34■■□□□ 1.49
HLA-F-216ENST00000259951 DIP2CQ9Y2E4 1556 aa24.31■■□□□ 1.48
HLA-F-216ENST00000259951 SIN3AQ96ST3 1273 aa24.3■■□□□ 1.48
HLA-F-216ENST00000259951 BCORL1Q5H9F3 1711 aa24.29■■□□□ 1.48
HLA-F-216ENST00000259951 NEUROD1Q13562 356 aa24.29■■□□□ 1.48
HLA-F-216ENST00000259951 PKD2Q13563 968 aa24.29■■□□□ 1.48
HLA-F-216ENST00000259951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.28■■□□□ 1.48
HLA-F-216ENST00000259951 ANKRD30BQ9BXX2 1392 aa24.28■■□□□ 1.48
HLA-F-216ENST00000259951 KANK1Q14678 1352 aa24.27■■□□□ 1.48
HLA-F-216ENST00000259951 KIF3BO15066 747 aa24.27■■□□□ 1.48
HLA-F-216ENST00000259951 RNF17Q9BXT8 1623 aaKnown RBP24.26■■□□□ 1.47
HLA-F-216ENST00000259951 PRDM15P57071 1507 aaPredicted RBP24.25■■□□□ 1.47
HLA-F-216ENST00000259951 FOXD1Q16676 465 aa24.24■■□□□ 1.47
HLA-F-216ENST00000259951 TONSLQ96HA7 1378 aa24.22■■□□□ 1.47
HLA-F-216ENST00000259951 VWDEQ8N2E2 1590 aa24.22■■□□□ 1.47
HLA-F-216ENST00000259951 YEATS2Q9ULM3 1422 aa24.21■■□□□ 1.47
HLA-F-216ENST00000259951 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
HLA-F-216ENST00000259951 ATP10AO60312 1499 aa24.2■■□□□ 1.46
HLA-F-216ENST00000259951 TET3O43151 1660 aa24.19■■□□□ 1.46
HLA-F-216ENST00000259951 REREQ9P2R6 1566 aa24.19■■□□□ 1.46
HLA-F-216ENST00000259951 COL17A1Q9UMD9 1497 aaPredicted RBP24.19■■□□□ 1.46
HLA-F-216ENST00000259951 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
HLA-F-216ENST00000259951 ARHGEF40Q8TER5 1519 aa24.15■■□□□ 1.46
HLA-F-216ENST00000259951 E9PCH4 1651 aa24.13■■□□□ 1.45
HLA-F-216ENST00000259951 LMTK2Q8IWU2 1503 aa24.13■■□□□ 1.45
HLA-F-216ENST00000259951 AGLP35573 1532 aa24.11■■□□□ 1.45
HLA-F-216ENST00000259951 CEP152O94986 1710 aa24.1■■□□□ 1.45
HLA-F-216ENST00000259951 GGT6Q6P531 493 aa24.09■■□□□ 1.45
HLA-F-216ENST00000259951 ZC3H13Q5T200 1668 aaKnown RBP24.08■■□□□ 1.45
HLA-F-216ENST00000259951 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.45
HLA-F-216ENST00000259951 EFCAB6Q5THR3 1501 aa24.07■■□□□ 1.44
HLA-F-216ENST00000259951 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
HLA-F-216ENST00000259951 CCDC144AA2RUR9 1427 aa24.07■■□□□ 1.44
HLA-F-216ENST00000259951 SPHKAPQ2M3C7 1700 aa24.06■■□□□ 1.44
HLA-F-216ENST00000259951 ABCC3O15438 1527 aa24.04■■□□□ 1.44
HLA-F-216ENST00000259951 WASHC2CQ9Y4E1 1318 aa24.03■■□□□ 1.44
HLA-F-216ENST00000259951 PLA2R1Q13018 1463 aa24.03■■□□□ 1.44
HLA-F-216ENST00000259951 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
HLA-F-216ENST00000259951 PTPRTO14522 1441 aa24.02■■□□□ 1.44
HLA-F-216ENST00000259951 TRPM2O94759 1503 aa24.02■■□□□ 1.44
HLA-F-216ENST00000259951 CAMSAP1Q5T5Y3 1602 aa24.01■■□□□ 1.43
HLA-F-216ENST00000259951 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
HLA-F-216ENST00000259951 SIGLEC1Q9BZZ2 1709 aa23.95■■□□□ 1.42
HLA-F-216ENST00000259951 ARHGAP31Q2M1Z3 1444 aa23.95■■□□□ 1.42
HLA-F-216ENST00000259951 NPATQ14207 1427 aa23.93■■□□□ 1.42
HLA-F-216ENST00000259951 ZNF316A6NFI3 1004 aaPredicted RBP23.91■■□□□ 1.42
HLA-F-216ENST00000259951 CFAP65Q6ZU64 1925 aaKnown RBP23.91■■□□□ 1.42
HLA-F-216ENST00000259951 CLTCL1P53675 1640 aa23.9■■□□□ 1.42
HLA-F-216ENST00000259951 KDM4FA0A1W2PPD8 638 aa23.9■■□□□ 1.42
HLA-F-216ENST00000259951 CNTLNQ9NXG0 1405 aa23.9■■□□□ 1.42
HLA-F-216ENST00000259951 KIF1BO60333 1816 aa23.88■■□□□ 1.41
HLA-F-216ENST00000259951 NEURL4Q96JN8 1562 aa23.88■■□□□ 1.41
HLA-F-216ENST00000259951 CLTCQ00610 1675 aaKnown RBP23.87■■□□□ 1.41
HLA-F-216ENST00000259951 ARID4BQ4LE39 1312 aaPredicted RBP23.86■■□□□ 1.41
HLA-F-216ENST00000259951 NOS1P29475 1434 aa23.84■■□□□ 1.41
HLA-F-216ENST00000259951 SPATA31E1Q6ZUB1 1445 aa23.84■■□□□ 1.41
HLA-F-216ENST00000259951 ESF1Q9H501 851 aaKnown RBP23.84■■□□□ 1.41
HLA-F-216ENST00000259951 UHRF1BP1Q6BDS2 1440 aa23.83■■□□□ 1.41
HLA-F-216ENST00000259951 MLECQ14165 292 aa23.83■■□□□ 1.41
HLA-F-216ENST00000259951 PREX1Q8TCU6 1659 aa23.82■■□□□ 1.4
HLA-F-216ENST00000259951 DCAF11Q8TEB1 546 aa23.81■■□□□ 1.4
HLA-F-216ENST00000259951 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
HLA-F-216ENST00000259951 STAC3Q96MF2 364 aa23.8■■□□□ 1.4
HLA-F-216ENST00000259951 UGGT1Q9NYU2 1555 aa23.79■■□□□ 1.4
HLA-F-216ENST00000259951 PIK3C2BO00750 1634 aa23.78■■□□□ 1.4
HLA-F-216ENST00000259951 SYNMO15061 1565 aa23.77■■□□□ 1.4
HLA-F-216ENST00000259951 NBPF8Q3BBV2 869 aa23.77■■□□□ 1.4
HLA-F-216ENST00000259951 MROH2AA6NES4 1674 aa23.76■■□□□ 1.39
HLA-F-216ENST00000259951 KDM2AQ9Y2K7 1162 aa23.76■■□□□ 1.39
HLA-F-216ENST00000259951 SLC52A1Q9NWF4 448 aa23.75■■□□□ 1.39
HLA-F-216ENST00000259951 ERVK-7P63135 1459 aa23.74■■□□□ 1.39
HLA-F-216ENST00000259951 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
HLA-F-216ENST00000259951 ADGRB3O60242 1522 aa23.74■■□□□ 1.39
HLA-F-216ENST00000259951 RALGAPBQ86X10 1494 aa23.72■■□□□ 1.39
HLA-F-216ENST00000259951 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
HLA-F-216ENST00000259951 SPATA31D1Q6ZQQ2 1576 aa23.72■■□□□ 1.39
HLA-F-216ENST00000259951 ZMYM3Q14202 1370 aa23.7■■□□□ 1.39
HLA-F-216ENST00000259951 IFT172Q9UG01 1749 aa23.69■■□□□ 1.38
HLA-F-216ENST00000259951 FER1L4A9Z1Z3 1794 aa23.69■■□□□ 1.38
HLA-F-216ENST00000259951 TRPM1Q7Z4N2 1603 aa23.68■■□□□ 1.38
HLA-F-216ENST00000259951 CHGAP10645 457 aaKnown RBP23.67■■□□□ 1.38
HLA-F-216ENST00000259951 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.38
HLA-F-216ENST00000259951 FBXO31Q5XUX0 539 aaPredicted RBP23.66■■□□□ 1.38
HLA-F-216ENST00000259951 MYOM2P54296 1465 aa23.66■■□□□ 1.38
HLA-F-216ENST00000259951 RPGRIP1LQ68CZ1 1315 aa23.66■■□□□ 1.38
HLA-F-216ENST00000259951 MADDQ8WXG6 1647 aa23.65■■□□□ 1.38
HLA-F-216ENST00000259951 IDI1Q13907 227 aa23.65■■□□□ 1.38
HLA-F-216ENST00000259951 PPLO60437 1756 aa23.64■■□□□ 1.38
HLA-F-216ENST00000259951 TMEM131LA2VDJ0 1609 aa23.62■■□□□ 1.37
HLA-F-216ENST00000259951 ROCK2O75116 1388 aaKnown RBP23.61■■□□□ 1.37
HLA-F-216ENST00000259951 LAMC1P11047 1609 aa23.61■■□□□ 1.37
HLA-F-216ENST00000259951 KIAA1210Q9ULL0 1709 aa23.6■■□□□ 1.37
HLA-F-216ENST00000259951 HSPA5P11021 654 aaKnown RBP23.59■■□□□ 1.37
HLA-F-216ENST00000259951 MYO5BQ9ULV0 1848 aa23.59■■□□□ 1.37
HLA-F-216ENST00000259951 CARD11Q9BXL7 1154 aa23.59■■□□□ 1.37
HLA-F-216ENST00000259951 C3P01024 1663 aa23.59■■□□□ 1.37
HLA-F-216ENST00000259951 DIEXFQ68CQ4 756 aaKnown RBP23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms