RNA–Protein interactions for RNA: ENST00000259038.6

MRPL47-201, Transcript of mitochondrial ribosomal protein L47, humanhuman

TSL 1 (best) BASIC

Gene MRPL47, Length 1,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47-201ENST00000259038 WIZO95785 1651 aa13.89□□□□□ -0.19
MRPL47-201ENST00000259038 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
MRPL47-201ENST00000259038 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
MRPL47-201ENST00000259038 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
MRPL47-201ENST00000259038 ZNF454Q8N9F8 522 aa13.86□□□□□ -0.19
MRPL47-201ENST00000259038 FOSBP53539 338 aa13.85□□□□□ -0.19
MRPL47-201ENST00000259038 PDIA6Q15084 440 aa13.84□□□□□ -0.19
MRPL47-201ENST00000259038 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
MRPL47-201ENST00000259038 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
MRPL47-201ENST00000259038 VSIG10Q8N0Z9 540 aa13.83□□□□□ -0.2
MRPL47-201ENST00000259038 ARHGAP33O14559 1287 aa13.82□□□□□ -0.2
MRPL47-201ENST00000259038 PTGER2P43116 358 aa13.82□□□□□ -0.2
MRPL47-201ENST00000259038 KRTAP3-3Q9BYR6 98 aa13.82□□□□□ -0.2
MRPL47-201ENST00000259038 KRTAP3-2Q9BYR7 98 aa13.82□□□□□ -0.2
MRPL47-201ENST00000259038 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
MRPL47-201ENST00000259038 PHF14O94880 888 aa13.81□□□□□ -0.2
MRPL47-201ENST00000259038 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
MRPL47-201ENST00000259038 ZDHHC16Q969W1 377 aa13.81□□□□□ -0.2
MRPL47-201ENST00000259038 EPAS1Q99814 870 aa13.8□□□□□ -0.2
MRPL47-201ENST00000259038 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
MRPL47-201ENST00000259038 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
MRPL47-201ENST00000259038 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
MRPL47-201ENST00000259038 LSM11P83369 360 aaKnown RBP eCLIP13.75□□□□□ -0.21
MRPL47-201ENST00000259038 KCNV2Q8TDN2 545 aa13.75□□□□□ -0.21
MRPL47-201ENST00000259038 PCDHGA10Q9Y5H3 936 aa13.75□□□□□ -0.21
MRPL47-201ENST00000259038 CFTRP13569 1480 aa13.74□□□□□ -0.21
MRPL47-201ENST00000259038 PTPREP23469 700 aa13.74□□□□□ -0.21
MRPL47-201ENST00000259038 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
MRPL47-201ENST00000259038 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
MRPL47-201ENST00000259038 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
MRPL47-201ENST00000259038 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
MRPL47-201ENST00000259038 DDX12PQ92771 950 aa13.71□□□□□ -0.21
MRPL47-201ENST00000259038 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.21
MRPL47-201ENST00000259038 SPNS2Q8IVW8 549 aa13.7□□□□□ -0.22
MRPL47-201ENST00000259038 KCNK17Q96T54 332 aa13.7□□□□□ -0.22
MRPL47-201ENST00000259038 TK2O00142 265 aa13.69□□□□□ -0.22
MRPL47-201ENST00000259038 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
MRPL47-201ENST00000259038 ADAM33Q9BZ11 813 aa13.69□□□□□ -0.22
MRPL47-201ENST00000259038 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
MRPL47-201ENST00000259038 KDM2AQ9Y2K7 1162 aa13.68□□□□□ -0.22
MRPL47-201ENST00000259038 PSEN2P49810 448 aa13.66□□□□□ -0.22
MRPL47-201ENST00000259038 ZNF608Q9ULD9 1512 aaPredicted RBP13.65□□□□□ -0.22
MRPL47-201ENST00000259038 NBR1Q14596 966 aa13.65□□□□□ -0.22
MRPL47-201ENST00000259038 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
MRPL47-201ENST00000259038 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
MRPL47-201ENST00000259038 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
MRPL47-201ENST00000259038 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
MRPL47-201ENST00000259038 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
MRPL47-201ENST00000259038 TOP2AP11388 1531 aaKnown RBP13.62□□□□□ -0.23
MRPL47-201ENST00000259038 PPP1R3GB7ZBB8 358 aa13.61□□□□□ -0.23
MRPL47-201ENST00000259038 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
MRPL47-201ENST00000259038 C6orf132Q5T0Z8 1188 aa13.61□□□□□ -0.23
MRPL47-201ENST00000259038 DMRTA1Q5VZB9 504 aa13.61□□□□□ -0.23
MRPL47-201ENST00000259038 MAP3K7O43318 606 aa13.6□□□□□ -0.23
MRPL47-201ENST00000259038 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
MRPL47-201ENST00000259038 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
MRPL47-201ENST00000259038 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
MRPL47-201ENST00000259038 MMRN1Q13201 1228 aa13.58□□□□□ -0.24
MRPL47-201ENST00000259038 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
MRPL47-201ENST00000259038 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
MRPL47-201ENST00000259038 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
MRPL47-201ENST00000259038 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
MRPL47-201ENST00000259038 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
MRPL47-201ENST00000259038 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
MRPL47-201ENST00000259038 OSBPP22059 807 aa13.55□□□□□ -0.24
MRPL47-201ENST00000259038 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
MRPL47-201ENST00000259038 ONECUT3O60422 494 aaPredicted RBP13.54□□□□□ -0.24
MRPL47-201ENST00000259038 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
MRPL47-201ENST00000259038 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.25
MRPL47-201ENST00000259038 CHD1O14646 1710 aa13.51□□□□□ -0.25
MRPL47-201ENST00000259038 HRO43593 1189 aa13.51□□□□□ -0.25
MRPL47-201ENST00000259038 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
MRPL47-201ENST00000259038 COL9A1P20849 921 aa13.5□□□□□ -0.25
MRPL47-201ENST00000259038 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
MRPL47-201ENST00000259038 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
MRPL47-201ENST00000259038 SEMA3EO15041 775 aa13.49□□□□□ -0.25
MRPL47-201ENST00000259038 MLLT3P42568 568 aaPredicted RBP13.49□□□□□ -0.25
MRPL47-201ENST00000259038 RNF166Q96A37 237 aaPredicted RBP13.49□□□□□ -0.25
MRPL47-201ENST00000259038 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
MRPL47-201ENST00000259038 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
MRPL47-201ENST00000259038 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
MRPL47-201ENST00000259038 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
MRPL47-201ENST00000259038 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.25
MRPL47-201ENST00000259038 MRPL50Q8N5N7 158 aaKnown RBP13.45□□□□□ -0.26
MRPL47-201ENST00000259038 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
MRPL47-201ENST00000259038 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
MRPL47-201ENST00000259038 BHMG1C9JSJ3 638 aaPredicted RBP13.44□□□□□ -0.26
MRPL47-201ENST00000259038 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
MRPL47-201ENST00000259038 GOLGA8CPA6NN73 597 aa13.43□□□□□ -0.26
MRPL47-201ENST00000259038 DNMBPQ6XZF7 1577 aa13.43□□□□□ -0.26
MRPL47-201ENST00000259038 RBM27Q9P2N5 1060 aaKnown RBP13.43□□□□□ -0.26
MRPL47-201ENST00000259038 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
MRPL47-201ENST00000259038 PRSS12P56730 875 aa13.42□□□□□ -0.26
MRPL47-201ENST00000259038 PROX2Q3B8N5 592 aa13.42□□□□□ -0.26
MRPL47-201ENST00000259038 LAPTM4BQ86VI4 370 aa13.41□□□□□ -0.26
MRPL47-201ENST00000259038 KIAA1468Q9P260 1216 aa13.41□□□□□ -0.26
MRPL47-201ENST00000259038 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
MRPL47-201ENST00000259038 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
MRPL47-201ENST00000259038 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
MRPL47-201ENST00000259038 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms