RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
VHL-201ENST00000256474 RALBP1Q15311 655 aa17.93■□□□□ 0.46
VHL-201ENST00000256474 CCDC144AA2RUR9 1427 aa17.91■□□□□ 0.46
VHL-201ENST00000256474 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.46
VHL-201ENST00000256474 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.46
VHL-201ENST00000256474 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
VHL-201ENST00000256474 WDR43Q15061 677 aaKnown RBP eCLIP17.89■□□□□ 0.45
VHL-201ENST00000256474 PTPRGP23470 1445 aa17.89■□□□□ 0.45
VHL-201ENST00000256474 BCORL1Q5H9F3 1711 aa17.88■□□□□ 0.45
VHL-201ENST00000256474 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
VHL-201ENST00000256474 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
VHL-201ENST00000256474 TMF1P82094 1093 aa17.87■□□□□ 0.45
VHL-201ENST00000256474 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
VHL-201ENST00000256474 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
VHL-201ENST00000256474 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
VHL-201ENST00000256474 ATP10BO94823 1461 aa17.84■□□□□ 0.45
VHL-201ENST00000256474 RGS3P49796 1198 aa17.84■□□□□ 0.45
VHL-201ENST00000256474 NEUROD2Q15784 382 aa17.84■□□□□ 0.45
VHL-201ENST00000256474 C20orf194Q5TEA3 1177 aa17.84■□□□□ 0.45
VHL-201ENST00000256474 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
VHL-201ENST00000256474 PDE4AP27815 886 aa17.84■□□□□ 0.45
VHL-201ENST00000256474 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
VHL-201ENST00000256474 RTN4Q9NQC3 1192 aaKnown RBP17.82■□□□□ 0.44
VHL-201ENST00000256474 DAXXQ9UER7 740 aaPredicted RBP17.82■□□□□ 0.44
VHL-201ENST00000256474 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
VHL-201ENST00000256474 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
VHL-201ENST00000256474 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
VHL-201ENST00000256474 NEFMP07197 916 aa17.8■□□□□ 0.44
VHL-201ENST00000256474 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
VHL-201ENST00000256474 AFAP1Q8N556 730 aa17.79■□□□□ 0.44
VHL-201ENST00000256474 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
VHL-201ENST00000256474 RALGAPBQ86X10 1494 aa17.77■□□□□ 0.44
VHL-201ENST00000256474 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
VHL-201ENST00000256474 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
VHL-201ENST00000256474 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
VHL-201ENST00000256474 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
VHL-201ENST00000256474 KDM5CP41229 1560 aa17.74■□□□□ 0.43
VHL-201ENST00000256474 PLEKHH2Q8IVE3 1493 aa17.73■□□□□ 0.43
VHL-201ENST00000256474 TESK2Q96S53 571 aa17.73■□□□□ 0.43
VHL-201ENST00000256474 RNF123Q5XPI4 1314 aa17.73■□□□□ 0.43
VHL-201ENST00000256474 ARHGAP5Q13017 1502 aa17.73■□□□□ 0.43
VHL-201ENST00000256474 ADGRL2O95490 1459 aa17.71■□□□□ 0.43
VHL-201ENST00000256474 APAF1O14727 1248 aa17.71■□□□□ 0.43
VHL-201ENST00000256474 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
VHL-201ENST00000256474 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
VHL-201ENST00000256474 KIF3BO15066 747 aa17.7■□□□□ 0.42
VHL-201ENST00000256474 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
VHL-201ENST00000256474 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
VHL-201ENST00000256474 RRP7AQ9Y3A4 280 aaKnown RBP17.7■□□□□ 0.42
VHL-201ENST00000256474 PPP2R1AP30153 589 aa17.69■□□□□ 0.42
VHL-201ENST00000256474 FRAT1Q92837 279 aaPredicted RBP17.69■□□□□ 0.42
VHL-201ENST00000256474 PRAG1Q86YV5 1406 aa17.69■□□□□ 0.42
VHL-201ENST00000256474 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
VHL-201ENST00000256474 CCDC141Q6ZP82 1450 aa17.68■□□□□ 0.42
VHL-201ENST00000256474 UHRF1BP1Q6BDS2 1440 aa17.68■□□□□ 0.42
VHL-201ENST00000256474 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
VHL-201ENST00000256474 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
VHL-201ENST00000256474 RSPH4AQ5TD94 716 aa17.68■□□□□ 0.42
VHL-201ENST00000256474 BACH2Q9BYV9 841 aa17.68■□□□□ 0.42
VHL-201ENST00000256474 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
VHL-201ENST00000256474 PARD3Q8TEW0 1356 aa17.67■□□□□ 0.42
VHL-201ENST00000256474 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
VHL-201ENST00000256474 CFAP70Q5T0N1 1121 aa17.67■□□□□ 0.42
VHL-201ENST00000256474 SAFB2Q14151 953 aaKnown RBP eCLIP17.66■□□□□ 0.42
VHL-201ENST00000256474 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
VHL-201ENST00000256474 ABCC10Q5T3U5 1492 aa17.65■□□□□ 0.42
VHL-201ENST00000256474 BCAR3O75815 825 aa17.65■□□□□ 0.42
VHL-201ENST00000256474 BCL2L13Q9BXK5 485 aa17.64■□□□□ 0.41
VHL-201ENST00000256474 ADGBQ8N7X0 1667 aa17.63■□□□□ 0.41
VHL-201ENST00000256474 A2MP01023 1474 aa17.63■□□□□ 0.41
VHL-201ENST00000256474 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
VHL-201ENST00000256474 NUP160Q12769 1436 aa17.61■□□□□ 0.41
VHL-201ENST00000256474 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.61■□□□□ 0.41
VHL-201ENST00000256474 ARXQ96QS3 562 aa17.6■□□□□ 0.41
VHL-201ENST00000256474 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
VHL-201ENST00000256474 CDC42BPAQ5VT25 1732 aa17.6■□□□□ 0.41
VHL-201ENST00000256474 PLA2R1Q13018 1463 aa17.6■□□□□ 0.41
VHL-201ENST00000256474 GGT6Q6P531 493 aa17.59■□□□□ 0.41
VHL-201ENST00000256474 CLUAP1Q96AJ1 413 aa17.59■□□□□ 0.41
VHL-201ENST00000256474 PLEKHH1Q9ULM0 1364 aa17.59■□□□□ 0.41
VHL-201ENST00000256474 IL27Q8NEV9 243 aa17.59■□□□□ 0.41
VHL-201ENST00000256474 CDCA8Q53HL2 280 aa17.58■□□□□ 0.4
VHL-201ENST00000256474 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
VHL-201ENST00000256474 TMEM132EQ6IEE7 984 aa17.57■□□□□ 0.4
VHL-201ENST00000256474 COG6Q9Y2V7 657 aa17.57■□□□□ 0.4
VHL-201ENST00000256474 ARHGEF12Q9NZN5 1544 aa17.57■□□□□ 0.4
VHL-201ENST00000256474 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
VHL-201ENST00000256474 DMRT2Q9Y5R5 561 aa17.56■□□□□ 0.4
VHL-201ENST00000256474 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
VHL-201ENST00000256474 SHANK2Q9UPX8 1470 aa17.55■□□□□ 0.4
VHL-201ENST00000256474 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
VHL-201ENST00000256474 ABCA8O94911 1581 aa17.53■□□□□ 0.4
VHL-201ENST00000256474 MS4A1P11836 297 aa17.53■□□□□ 0.4
VHL-201ENST00000256474 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
VHL-201ENST00000256474 TRAPPC8Q9Y2L5 1435 aa17.52■□□□□ 0.4
VHL-201ENST00000256474 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.4
VHL-201ENST00000256474 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.4
VHL-201ENST00000256474 COL17A1Q9UMD9 1497 aaPredicted RBP17.52■□□□□ 0.39
VHL-201ENST00000256474 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
VHL-201ENST00000256474 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms