RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 LRPPRCP42704 1394 aaKnown RBP23.06■■□□□ 1.28
SLC52A1-201ENST00000254853 MYBBP1AQ9BQG0 1328 aaKnown RBP23.05■■□□□ 1.28
SLC52A1-201ENST00000254853 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
SLC52A1-201ENST00000254853 RALBP1Q15311 655 aa23.04■■□□□ 1.28
SLC52A1-201ENST00000254853 CCDC136Q96JN2 1154 aa23.04■■□□□ 1.28
SLC52A1-201ENST00000254853 FAM135AQ9P2D6 1515 aa23.03■■□□□ 1.28
SLC52A1-201ENST00000254853 E9PCH4 1651 aa23.02■■□□□ 1.28
SLC52A1-201ENST00000254853 KTN1Q86UP2 1357 aaKnown RBP23.02■■□□□ 1.28
SLC52A1-201ENST00000254853 CCDC141Q6ZP82 1450 aa23.02■■□□□ 1.28
SLC52A1-201ENST00000254853 SAMD9LQ8IVG5 1584 aa23.02■■□□□ 1.27
SLC52A1-201ENST00000254853 PRAG1Q86YV5 1406 aa22.98■■□□□ 1.27
SLC52A1-201ENST00000254853 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
SLC52A1-201ENST00000254853 CDC42BPBQ9Y5S2 1711 aa22.97■■□□□ 1.27
SLC52A1-201ENST00000254853 PREX2Q70Z35 1606 aa22.96■■□□□ 1.27
SLC52A1-201ENST00000254853 CCDC144AA2RUR9 1427 aa22.96■■□□□ 1.27
SLC52A1-201ENST00000254853 TRPM1Q7Z4N2 1603 aa22.96■■□□□ 1.27
SLC52A1-201ENST00000254853 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
SLC52A1-201ENST00000254853 NBPF1Q3BBV0 1214 aa22.94■■□□□ 1.26
SLC52A1-201ENST00000254853 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
SLC52A1-201ENST00000254853 PARD3Q8TEW0 1356 aa22.92■■□□□ 1.26
SLC52A1-201ENST00000254853 PLA2R1Q13018 1463 aa22.92■■□□□ 1.26
SLC52A1-201ENST00000254853 NLRP13Q86W25 1043 aa22.92■■□□□ 1.26
SLC52A1-201ENST00000254853 SYCP2Q9BX26 1530 aa22.9■■□□□ 1.26
SLC52A1-201ENST00000254853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
SLC52A1-201ENST00000254853 RRP1P56182 461 aaKnown RBP22.89■■□□□ 1.26
SLC52A1-201ENST00000254853 A2MP01023 1474 aa22.89■■□□□ 1.25
SLC52A1-201ENST00000254853 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.25
SLC52A1-201ENST00000254853 NOP58Q9Y2X3 529 aaKnown RBP22.89■■□□□ 1.25
SLC52A1-201ENST00000254853 SALL2Q9Y467 1007 aaPredicted RBP22.89■■□□□ 1.25
SLC52A1-201ENST00000254853 GPRASP1Q5JY77 1395 aa22.88■■□□□ 1.25
SLC52A1-201ENST00000254853 UNC13BO14795 1591 aa22.88■■□□□ 1.25
SLC52A1-201ENST00000254853 MAST1Q9Y2H9 1570 aa22.86■■□□□ 1.25
SLC52A1-201ENST00000254853 ARHGAP5Q13017 1502 aa22.86■■□□□ 1.25
SLC52A1-201ENST00000254853 RCAN3Q9UKA8 241 aa22.85■■□□□ 1.25
SLC52A1-201ENST00000254853 TTC37Q6PGP7 1564 aa22.85■■□□□ 1.25
SLC52A1-201ENST00000254853 COL17A1Q9UMD9 1497 aaPredicted RBP22.85■■□□□ 1.25
SLC52A1-201ENST00000254853 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
SLC52A1-201ENST00000254853 DISP3Q9P2K9 1392 aa22.84■■□□□ 1.25
SLC52A1-201ENST00000254853 EXOC6Q8TAG9 804 aa22.84■■□□□ 1.25
SLC52A1-201ENST00000254853 TESK2Q96S53 571 aa22.83■■□□□ 1.25
SLC52A1-201ENST00000254853 PRDM15P57071 1507 aaPredicted RBP22.83■■□□□ 1.24
SLC52A1-201ENST00000254853 PLEKHH2Q8IVE3 1493 aa22.82■■□□□ 1.24
SLC52A1-201ENST00000254853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.82■■□□□ 1.24
SLC52A1-201ENST00000254853 CC2D1BQ5T0F9 858 aaKnown RBP22.82■■□□□ 1.24
SLC52A1-201ENST00000254853 PDE3BQ13370 1112 aa22.81■■□□□ 1.24
SLC52A1-201ENST00000254853 LAMC1P11047 1609 aa22.81■■□□□ 1.24
SLC52A1-201ENST00000254853 IQGAP3Q86VI3 1631 aa22.8■■□□□ 1.24
SLC52A1-201ENST00000254853 ANP32AP39687 249 aaKnown RBP22.79■■□□□ 1.24
SLC52A1-201ENST00000254853 ERBINQ96RT1 1412 aa22.79■■□□□ 1.24
SLC52A1-201ENST00000254853 CDCA7LQ96GN5 454 aa22.78■■□□□ 1.24
SLC52A1-201ENST00000254853 PANK3Q9H999 370 aa22.78■■□□□ 1.24
SLC52A1-201ENST00000254853 PLXNC1O60486 1568 aa22.78■■□□□ 1.24
SLC52A1-201ENST00000254853 WASHC2CQ9Y4E1 1318 aa22.78■■□□□ 1.24
SLC52A1-201ENST00000254853 MYO5CQ9NQX4 1742 aa22.78■■□□□ 1.24
SLC52A1-201ENST00000254853 IPO9Q96P70 1041 aaKnown RBP22.77■■□□□ 1.24
SLC52A1-201ENST00000254853 MYT1LQ9UL68 1186 aa22.77■■□□□ 1.24
SLC52A1-201ENST00000254853 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
SLC52A1-201ENST00000254853 TMF1P82094 1093 aa22.74■■□□□ 1.23
SLC52A1-201ENST00000254853 BLMP54132 1417 aaPredicted RBP22.73■■□□□ 1.23
SLC52A1-201ENST00000254853 ATP10AO60312 1499 aa22.73■■□□□ 1.23
SLC52A1-201ENST00000254853 DUOX2Q9NRD8 1548 aa22.73■■□□□ 1.23
SLC52A1-201ENST00000254853 MAGI2Q86UL8 1455 aa22.72■■□□□ 1.23
SLC52A1-201ENST00000254853 INSRP06213 1382 aa22.71■■□□□ 1.23
SLC52A1-201ENST00000254853 NBR1Q14596 966 aa22.71■■□□□ 1.23
SLC52A1-201ENST00000254853 CHD1O14646 1710 aa22.7■■□□□ 1.22
SLC52A1-201ENST00000254853 TCERG1O14776 1098 aaKnown RBP22.69■■□□□ 1.22
SLC52A1-201ENST00000254853 ZMYM4Q5VZL5 1548 aa22.68■■□□□ 1.22
SLC52A1-201ENST00000254853 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
SLC52A1-201ENST00000254853 DEKP35659 375 aaKnown RBP22.68■■□□□ 1.22
SLC52A1-201ENST00000254853 ZBTB47Q9UFB7 747 aaPredicted RBP22.68■■□□□ 1.22
SLC52A1-201ENST00000254853 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
SLC52A1-201ENST00000254853 PLIN1O60240 522 aa22.67■■□□□ 1.22
SLC52A1-201ENST00000254853 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
SLC52A1-201ENST00000254853 RNF17Q9BXT8 1623 aaKnown RBP22.66■■□□□ 1.22
SLC52A1-201ENST00000254853 PLCH2O75038 1416 aa22.63■■□□□ 1.21
SLC52A1-201ENST00000254853 PDE4AP27815 886 aa22.62■■□□□ 1.21
SLC52A1-201ENST00000254853 WDR7Q9Y4E6 1490 aa22.61■■□□□ 1.21
SLC52A1-201ENST00000254853 NPM2Q86SE8 214 aaKnown RBP22.61■■□□□ 1.21
SLC52A1-201ENST00000254853 ADAMTS8Q9UP79 889 aa22.61■■□□□ 1.21
SLC52A1-201ENST00000254853 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
SLC52A1-201ENST00000254853 CRBNQ96SW2 442 aa22.61■■□□□ 1.21
SLC52A1-201ENST00000254853 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
SLC52A1-201ENST00000254853 MADDQ8WXG6 1647 aa22.59■■□□□ 1.21
SLC52A1-201ENST00000254853 MS4A1P11836 297 aa22.58■■□□□ 1.21
SLC52A1-201ENST00000254853 BACH2Q9BYV9 841 aa22.58■■□□□ 1.21
SLC52A1-201ENST00000254853 PPP2R1AP30153 589 aa22.57■■□□□ 1.2
SLC52A1-201ENST00000254853 KNSTRNQ9Y448 316 aa22.57■■□□□ 1.2
SLC52A1-201ENST00000254853 ABCC1P33527 1531 aa22.57■■□□□ 1.2
SLC52A1-201ENST00000254853 IQGAP1P46940 1657 aa22.56■■□□□ 1.2
SLC52A1-201ENST00000254853 AMER1Q5JTC6 1135 aaPredicted RBP22.55■■□□□ 1.2
SLC52A1-201ENST00000254853 C20orf194Q5TEA3 1177 aa22.53■■□□□ 1.2
SLC52A1-201ENST00000254853 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
SLC52A1-201ENST00000254853 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
SLC52A1-201ENST00000254853 SKAP1Q86WV1 359 aa22.53■■□□□ 1.2
SLC52A1-201ENST00000254853 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.2
SLC52A1-201ENST00000254853 TRPM2O94759 1503 aa22.52■■□□□ 1.2
SLC52A1-201ENST00000254853 SPAG9O60271 1321 aaKnown RBP22.51■■□□□ 1.19
SLC52A1-201ENST00000254853 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
SLC52A1-201ENST00000254853 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
SLC52A1-201ENST00000254853 SYNMO15061 1565 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms