RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 PLXNC1O60486 1568 aa17.58■□□□□ 0.41
SUGP1-201ENST00000247001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.417e-7■■■□□ 17.4
SUGP1-201ENST00000247001 PZPP20742 1482 aa17.58■□□□□ 0.4
SUGP1-201ENST00000247001 ZFYVE16Q7Z3T8 1539 aa17.56■□□□□ 0.4
SUGP1-201ENST00000247001 TONSLQ96HA7 1378 aa17.56■□□□□ 0.4
SUGP1-201ENST00000247001 PKD2Q13563 968 aa17.55■□□□□ 0.4
SUGP1-201ENST00000247001 KDM5CP41229 1560 aa17.54■□□□□ 0.4
SUGP1-201ENST00000247001 ATP7AQ04656 1500 aa17.53■□□□□ 0.4
SUGP1-201ENST00000247001 ZMYM4Q5VZL5 1548 aa17.53■□□□□ 0.4
SUGP1-201ENST00000247001 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
SUGP1-201ENST00000247001 ARHGEF40Q8TER5 1519 aa17.52■□□□□ 0.4
SUGP1-201ENST00000247001 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.39
SUGP1-201ENST00000247001 ATP10AO60312 1499 aa17.52■□□□□ 0.39
SUGP1-201ENST00000247001 MLH3Q9UHC1 1453 aa17.51■□□□□ 0.39
SUGP1-201ENST00000247001 INO80Q9ULG1 1556 aaPredicted RBP17.51■□□□□ 0.39
SUGP1-201ENST00000247001 ABCA6Q8N139 1617 aa17.5■□□□□ 0.39
SUGP1-201ENST00000247001 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
SUGP1-201ENST00000247001 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
SUGP1-201ENST00000247001 HECW2Q9P2P5 1572 aa17.5■□□□□ 0.39
SUGP1-201ENST00000247001 RTEL1-TNFRSF6BF6WH68 1400 aa17.5■□□□□ 0.39
SUGP1-201ENST00000247001 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
SUGP1-201ENST00000247001 CEBPAP49715 358 aaPredicted RBP17.49■□□□□ 0.39
SUGP1-201ENST00000247001 DIP2CQ9Y2E4 1556 aa17.48■□□□□ 0.39
SUGP1-201ENST00000247001 ERBINQ96RT1 1412 aa17.48■□□□□ 0.39
SUGP1-201ENST00000247001 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
SUGP1-201ENST00000247001 GGT6Q6P531 493 aa17.48■□□□□ 0.39
SUGP1-201ENST00000247001 UNC13BO14795 1591 aa17.46■□□□□ 0.39
SUGP1-201ENST00000247001 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
SUGP1-201ENST00000247001 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.39
SUGP1-201ENST00000247001 PPP1R15AO75807 674 aaPredicted RBP17.45■□□□□ 0.38
SUGP1-201ENST00000247001 KIF3BO15066 747 aa17.43■□□□□ 0.38
SUGP1-201ENST00000247001 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
SUGP1-201ENST00000247001 MADDQ8WXG6 1647 aa17.41■□□□□ 0.38
SUGP1-201ENST00000247001 BCORL1Q5H9F3 1711 aa17.41■□□□□ 0.38
SUGP1-201ENST00000247001 IQGAP3Q86VI3 1631 aa17.41■□□□□ 0.38
SUGP1-201ENST00000247001 L3MBTL2Q969R5 705 aa17.4■□□□□ 0.38
SUGP1-201ENST00000247001 A2MP01023 1474 aa17.4■□□□□ 0.38
SUGP1-201ENST00000247001 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.37
SUGP1-201ENST00000247001 DHX29Q7Z478 1369 aaKnown RBP17.39■□□□□ 0.37
SUGP1-201ENST00000247001 ADAMTSL3P82987 1691 aa17.38■□□□□ 0.37
SUGP1-201ENST00000247001 PTPRMP28827 1452 aa17.38■□□□□ 0.37
SUGP1-201ENST00000247001 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
SUGP1-201ENST00000247001 RIMS1Q86UR5 1692 aaKnown RBP17.35■□□□□ 0.37
SUGP1-201ENST00000247001 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
SUGP1-201ENST00000247001 EIF2AK4Q9P2K8 1649 aaKnown RBP17.34■□□□□ 0.37
SUGP1-201ENST00000247001 KANK1Q14678 1352 aa17.33■□□□□ 0.37
SUGP1-201ENST00000247001 ZNF326Q5BKZ1 582 aaKnown RBP17.33■□□□□ 0.36
SUGP1-201ENST00000247001 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.36
SUGP1-201ENST00000247001 E9PCH4 1651 aa17.31■□□□□ 0.36
SUGP1-201ENST00000247001 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
SUGP1-201ENST00000247001 HSPA2P54652 639 aa17.3■□□□□ 0.36
SUGP1-201ENST00000247001 MROH1Q8NDA8 1641 aa17.3■□□□□ 0.36
SUGP1-201ENST00000247001 SLC24A1O60721 1099 aa17.29■□□□□ 0.36
SUGP1-201ENST00000247001 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
SUGP1-201ENST00000247001 FER1L4A9Z1Z3 1794 aa17.29■□□□□ 0.36
SUGP1-201ENST00000247001 CEP152O94986 1710 aa17.29■□□□□ 0.36
SUGP1-201ENST00000247001 AGLP35573 1532 aa17.28■□□□□ 0.36
SUGP1-201ENST00000247001 PRDM15P57071 1507 aaPredicted RBP17.28■□□□□ 0.36
SUGP1-201ENST00000247001 PLA2R1Q13018 1463 aa17.28■□□□□ 0.36
SUGP1-201ENST00000247001 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
SUGP1-201ENST00000247001 KDM2AQ9Y2K7 1162 aa17.28■□□□□ 0.36
SUGP1-201ENST00000247001 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
SUGP1-201ENST00000247001 CFAP65Q6ZU64 1925 aaKnown RBP17.28■□□□□ 0.36
SUGP1-201ENST00000247001 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.36
SUGP1-201ENST00000247001 NBPF8Q3BBV2 869 aa17.27■□□□□ 0.36
SUGP1-201ENST00000247001 TET3O43151 1660 aa17.27■□□□□ 0.36
SUGP1-201ENST00000247001 ZMYM3Q14202 1370 aa17.27■□□□□ 0.35
SUGP1-201ENST00000247001 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
SUGP1-201ENST00000247001 RNF17Q9BXT8 1623 aaKnown RBP17.25■□□□□ 0.35
SUGP1-201ENST00000247001 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
SUGP1-201ENST00000247001 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
SUGP1-201ENST00000247001 CLTCQ00610 1675 aaKnown RBP17.22■□□□□ 0.35
SUGP1-201ENST00000247001 EFCAB6Q5THR3 1501 aa17.2■□□□□ 0.34
SUGP1-201ENST00000247001 C3P01024 1663 aa17.18■□□□□ 0.34
SUGP1-201ENST00000247001 TRPM2O94759 1503 aa17.17■□□□□ 0.34
SUGP1-201ENST00000247001 CLTCL1P53675 1640 aa17.17■□□□□ 0.34
SUGP1-201ENST00000247001 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
SUGP1-201ENST00000247001 UGGT1Q9NYU2 1555 aa17.17■□□□□ 0.34
SUGP1-201ENST00000247001 ABCC3O15438 1527 aa17.16■□□□□ 0.34
SUGP1-201ENST00000247001 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
SUGP1-201ENST00000247001 MIER1Q8N108 512 aa17.16■□□□□ 0.34
SUGP1-201ENST00000247001 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
SUGP1-201ENST00000247001 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
SUGP1-201ENST00000247001 PTPRTO14522 1441 aa17.14■□□□□ 0.33
SUGP1-201ENST00000247001 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
SUGP1-201ENST00000247001 LMTK2Q8IWU2 1503 aa17.14■□□□□ 0.33
SUGP1-201ENST00000247001 NPATQ14207 1427 aa17.13■□□□□ 0.33
SUGP1-201ENST00000247001 DDX10Q13206 875 aaKnown RBP17.13■□□□□ 0.33
SUGP1-201ENST00000247001 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
SUGP1-201ENST00000247001 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
SUGP1-201ENST00000247001 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
SUGP1-201ENST00000247001 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
SUGP1-201ENST00000247001 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
SUGP1-201ENST00000247001 KIF1BO60333 1816 aa17.1■□□□□ 0.33
SUGP1-201ENST00000247001 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
SUGP1-201ENST00000247001 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
SUGP1-201ENST00000247001 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
SUGP1-201ENST00000247001 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.33
SUGP1-201ENST00000247001 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
SUGP1-201ENST00000247001 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms