RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 ZCCHC11Q5TAX3 1644 aaKnown RBP23.89■■□□□ 1.41
LRFN3-201ENST00000246529 ST20-MTHFSA0A0A6YYL1 179 aa23.88■■□□□ 1.41
LRFN3-201ENST00000246529 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
LRFN3-201ENST00000246529 PLA2R1Q13018 1463 aa23.87■■□□□ 1.41
LRFN3-201ENST00000246529 PLCH2O75038 1416 aa23.86■■□□□ 1.41
LRFN3-201ENST00000246529 IRX6P78412 446 aaPredicted RBP23.86■■□□□ 1.41
LRFN3-201ENST00000246529 UNC13BO14795 1591 aa23.84■■□□□ 1.41
LRFN3-201ENST00000246529 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
LRFN3-201ENST00000246529 ROCK2O75116 1388 aaKnown RBP23.84■■□□□ 1.41
LRFN3-201ENST00000246529 MYT1Q01538 1121 aa23.82■■□□□ 1.4
LRFN3-201ENST00000246529 PLXNC1O60486 1568 aa23.82■■□□□ 1.4
LRFN3-201ENST00000246529 TRAPPC8Q9Y2L5 1435 aa23.81■■□□□ 1.4
LRFN3-201ENST00000246529 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
LRFN3-201ENST00000246529 ARID4BQ4LE39 1312 aaPredicted RBP23.81■■□□□ 1.4
LRFN3-201ENST00000246529 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
LRFN3-201ENST00000246529 PRAG1Q86YV5 1406 aa23.79■■□□□ 1.4
LRFN3-201ENST00000246529 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
LRFN3-201ENST00000246529 ABCC1P33527 1531 aa23.76■■□□□ 1.39
LRFN3-201ENST00000246529 IQGAP3Q86VI3 1631 aa23.76■■□□□ 1.39
LRFN3-201ENST00000246529 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
LRFN3-201ENST00000246529 A2MP01023 1474 aa23.76■■□□□ 1.39
LRFN3-201ENST00000246529 ZBED9Q6R2W3 1325 aa23.76■■□□□ 1.39
LRFN3-201ENST00000246529 ERBINQ96RT1 1412 aa23.74■■□□□ 1.39
LRFN3-201ENST00000246529 SENP3-EIF4A1A0A087X0R7 540 aa23.73■■□□□ 1.39
LRFN3-201ENST00000246529 TRPM1Q7Z4N2 1603 aa23.71■■□□□ 1.39
LRFN3-201ENST00000246529 SPAG9O60271 1321 aaKnown RBP23.71■■□□□ 1.39
LRFN3-201ENST00000246529 MAGI2Q86UL8 1455 aa23.71■■□□□ 1.39
LRFN3-201ENST00000246529 TMC1Q8TDI8 760 aa23.64■■□□□ 1.38
LRFN3-201ENST00000246529 ATP10AO60312 1499 aa23.64■■□□□ 1.37
LRFN3-201ENST00000246529 PNISRQ8TF01 805 aaKnown RBP23.63■■□□□ 1.37
LRFN3-201ENST00000246529 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
LRFN3-201ENST00000246529 WDR7Q9Y4E6 1490 aa23.63■■□□□ 1.37
LRFN3-201ENST00000246529 ZFYVE16Q7Z3T8 1539 aa23.62■■□□□ 1.37
LRFN3-201ENST00000246529 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
LRFN3-201ENST00000246529 TESK2Q96S53 571 aa23.59■■□□□ 1.37
LRFN3-201ENST00000246529 FANCAO15360 1455 aa23.59■■□□□ 1.37
LRFN3-201ENST00000246529 MYT1LQ9UL68 1186 aa23.59■■□□□ 1.37
LRFN3-201ENST00000246529 E9PCH4 1651 aa23.58■■□□□ 1.37
LRFN3-201ENST00000246529 RTEL1-TNFRSF6BF6WH68 1400 aa23.58■■□□□ 1.37
LRFN3-201ENST00000246529 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
LRFN3-201ENST00000246529 PRDM15P57071 1507 aaPredicted RBP23.57■■□□□ 1.36
LRFN3-201ENST00000246529 ARAP3Q8WWN8 1544 aa23.57■■□□□ 1.36
LRFN3-201ENST00000246529 RALBP1Q15311 655 aa23.55■■□□□ 1.36
LRFN3-201ENST00000246529 COL17A1Q9UMD9 1497 aaPredicted RBP23.54■■□□□ 1.36
LRFN3-201ENST00000246529 SCAPERQ9BY12 1400 aa23.53■■□□□ 1.36
LRFN3-201ENST00000246529 EIF2AK4Q9P2K8 1649 aaKnown RBP23.52■■□□□ 1.36
LRFN3-201ENST00000246529 KIF3BO15066 747 aa23.52■■□□□ 1.36
LRFN3-201ENST00000246529 PER1O15534 1290 aaPredicted RBP23.52■■□□□ 1.36
LRFN3-201ENST00000246529 SMG6Q86US8 1419 aaKnown RBP23.52■■□□□ 1.36
LRFN3-201ENST00000246529 ATP7AQ04656 1500 aa23.52■■□□□ 1.35
LRFN3-201ENST00000246529 BRD4O60885 1362 aaPredicted RBP23.51■■□□□ 1.35
LRFN3-201ENST00000246529 ABCA9Q8IUA7 1624 aa23.51■■□□□ 1.35
LRFN3-201ENST00000246529 ASXL2Q76L83 1435 aa23.51■■□□□ 1.35
LRFN3-201ENST00000246529 LAMC1P11047 1609 aa23.51■■□□□ 1.35
LRFN3-201ENST00000246529 PPP4R2Q9NY27 417 aa23.51■■□□□ 1.35
LRFN3-201ENST00000246529 RBM19Q9Y4C8 960 aaKnown RBP23.51■■□□□ 1.35
LRFN3-201ENST00000246529 ADGRL1O94910 1474 aa23.5■■□□□ 1.35
LRFN3-201ENST00000246529 KTN1Q86UP2 1357 aaKnown RBP23.5■■□□□ 1.35
LRFN3-201ENST00000246529 NUDCQ9Y266 331 aa23.5■■□□□ 1.35
LRFN3-201ENST00000246529 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
LRFN3-201ENST00000246529 LRPPRCP42704 1394 aaKnown RBP23.49■■□□□ 1.35
LRFN3-201ENST00000246529 PANK3Q9H999 370 aa23.49■■□□□ 1.35
LRFN3-201ENST00000246529 TRPM2O94759 1503 aa23.48■■□□□ 1.35
LRFN3-201ENST00000246529 ERICH6BQ5W0A0 696 aa23.48■■□□□ 1.35
LRFN3-201ENST00000246529 INO80Q9ULG1 1556 aaPredicted RBP23.48■■□□□ 1.35
LRFN3-201ENST00000246529 PARD3Q8TEW0 1356 aa23.48■■□□□ 1.35
LRFN3-201ENST00000246529 TMF1P82094 1093 aa23.48■■□□□ 1.35
LRFN3-201ENST00000246529 B4GALNT3Q6L9W6 998 aa23.47■■□□□ 1.35
LRFN3-201ENST00000246529 PTPRTO14522 1441 aa23.47■■□□□ 1.35
LRFN3-201ENST00000246529 DEPDC5O75140 1603 aa23.45■■□□□ 1.35
LRFN3-201ENST00000246529 CLTCL1P53675 1640 aa23.45■■□□□ 1.35
LRFN3-201ENST00000246529 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
LRFN3-201ENST00000246529 KANK1Q14678 1352 aa23.44■■□□□ 1.34
LRFN3-201ENST00000246529 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
LRFN3-201ENST00000246529 RNF17Q9BXT8 1623 aaKnown RBP23.44■■□□□ 1.34
LRFN3-201ENST00000246529 SPHKAPQ2M3C7 1700 aa23.43■■□□□ 1.34
LRFN3-201ENST00000246529 SALL2Q9Y467 1007 aaPredicted RBP23.42■■□□□ 1.34
LRFN3-201ENST00000246529 TET3O43151 1660 aa23.41■■□□□ 1.34
LRFN3-201ENST00000246529 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.34
LRFN3-201ENST00000246529 UGGT1Q9NYU2 1555 aa23.39■■□□□ 1.33
LRFN3-201ENST00000246529 CEP152O94986 1710 aa23.38■■□□□ 1.33
LRFN3-201ENST00000246529 MROH1Q8NDA8 1641 aa23.37■■□□□ 1.33
LRFN3-201ENST00000246529 NPM1P06748 294 aaKnown RBP eCLIP23.35■■□□□ 1.33
LRFN3-201ENST00000246529 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
LRFN3-201ENST00000246529 RNF123Q5XPI4 1314 aa23.34■■□□□ 1.33
LRFN3-201ENST00000246529 IQGAP1P46940 1657 aa23.33■■□□□ 1.33
LRFN3-201ENST00000246529 WASHC2CQ9Y4E1 1318 aa23.33■■□□□ 1.33
LRFN3-201ENST00000246529 SCAF11Q99590 1463 aaKnown RBP23.33■■□□□ 1.32
LRFN3-201ENST00000246529 KIDINS220Q9ULH0 1771 aa23.32■■□□□ 1.32
LRFN3-201ENST00000246529 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
LRFN3-201ENST00000246529 ADGRF5Q8IZF2 1346 aa23.3■■□□□ 1.32
LRFN3-201ENST00000246529 ZNF518AQ6AHZ1 1483 aa23.29■■□□□ 1.32
LRFN3-201ENST00000246529 STAC3Q96MF2 364 aa23.28■■□□□ 1.32
LRFN3-201ENST00000246529 CD109Q6YHK3 1445 aa23.28■■□□□ 1.32
LRFN3-201ENST00000246529 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
LRFN3-201ENST00000246529 KNSTRNQ9Y448 316 aa23.26■■□□□ 1.31
LRFN3-201ENST00000246529 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
LRFN3-201ENST00000246529 CDCA7LQ96GN5 454 aa23.25■■□□□ 1.31
LRFN3-201ENST00000246529 GGT6Q6P531 493 aa23.25■■□□□ 1.31
LRFN3-201ENST00000246529 CHGAP10645 457 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms