RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 TRIM44Q96DX7 344 aaPredicted RBP16.65■□□□□ 0.26
SYMPK-201ENST00000245934 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
SYMPK-201ENST00000245934 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
SYMPK-201ENST00000245934 KIF7Q2M1P5 1343 aa16.64■□□□□ 0.26
SYMPK-201ENST00000245934 RALBP1Q15311 655 aa16.64■□□□□ 0.25
SYMPK-201ENST00000245934 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
SYMPK-201ENST00000245934 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
SYMPK-201ENST00000245934 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
SYMPK-201ENST00000245934 RSPH4AQ5TD94 716 aa16.63■□□□□ 0.25
SYMPK-201ENST00000245934 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
SYMPK-201ENST00000245934 DDRGK1Q96HY6 314 aa16.63■□□□□ 0.25
SYMPK-201ENST00000245934 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
SYMPK-201ENST00000245934 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
SYMPK-201ENST00000245934 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
SYMPK-201ENST00000245934 KIF15Q9NS87 1388 aa16.61■□□□□ 0.25
SYMPK-201ENST00000245934 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
SYMPK-201ENST00000245934 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
SYMPK-201ENST00000245934 APAF1O14727 1248 aa16.59■□□□□ 0.25
SYMPK-201ENST00000245934 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
SYMPK-201ENST00000245934 PLB1Q6P1J6 1458 aa16.59■□□□□ 0.25
SYMPK-201ENST00000245934 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.25
SYMPK-201ENST00000245934 EXOC6Q8TAG9 804 aa16.58■□□□□ 0.24
SYMPK-201ENST00000245934 GOLGA2Q08379 1002 aa16.57■□□□□ 0.24
SYMPK-201ENST00000245934 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
SYMPK-201ENST00000245934 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
SYMPK-201ENST00000245934 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
SYMPK-201ENST00000245934 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
SYMPK-201ENST00000245934 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
SYMPK-201ENST00000245934 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
SYMPK-201ENST00000245934 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
SYMPK-201ENST00000245934 ITPRIPQ8IWB1 547 aa16.54■□□□□ 0.24
SYMPK-201ENST00000245934 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
SYMPK-201ENST00000245934 HECW1Q76N89 1606 aa16.53■□□□□ 0.24
SYMPK-201ENST00000245934 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
SYMPK-201ENST00000245934 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.24
SYMPK-201ENST00000245934 CCDC7Q96M83 1385 aa16.52■□□□□ 0.24
SYMPK-201ENST00000245934 MAP3K1Q13233 1512 aa16.52■□□□□ 0.24
SYMPK-201ENST00000245934 SLC4A3P48751 1232 aa16.52■□□□□ 0.23
SYMPK-201ENST00000245934 BECN1Q14457 450 aa16.52■□□□□ 0.23
SYMPK-201ENST00000245934 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-201ENST00000245934 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-201ENST00000245934 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
SYMPK-201ENST00000245934 SMC4Q9NTJ3 1288 aa16.5■□□□□ 0.23
SYMPK-201ENST00000245934 NGDNQ8NEJ9 315 aaKnown RBP16.5■□□□□ 0.23
SYMPK-201ENST00000245934 TROQ12816 1431 aaPredicted RBP16.5■□□□□ 0.23
SYMPK-201ENST00000245934 RAPGEF3O95398 923 aa16.49■□□□□ 0.23
SYMPK-201ENST00000245934 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
SYMPK-201ENST00000245934 SUPT6HQ7KZ85 1726 aaKnown RBP16.48■□□□□ 0.23
SYMPK-201ENST00000245934 HDGFP51858 240 aaKnown RBP16.48■□□□□ 0.23
SYMPK-201ENST00000245934 ZNF330Q9Y3S2 320 aaPredicted RBP16.48■□□□□ 0.23
SYMPK-201ENST00000245934 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
SYMPK-201ENST00000245934 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
SYMPK-201ENST00000245934 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
SYMPK-201ENST00000245934 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
SYMPK-201ENST00000245934 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
SYMPK-201ENST00000245934 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
SYMPK-201ENST00000245934 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
SYMPK-201ENST00000245934 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
SYMPK-201ENST00000245934 TERF2IPQ9NYB0 399 aa16.47■□□□□ 0.23
SYMPK-201ENST00000245934 NAIPQ13075 1403 aa16.47■□□□□ 0.23
SYMPK-201ENST00000245934 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
SYMPK-201ENST00000245934 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
SYMPK-201ENST00000245934 SLC4A10Q6U841 1118 aa16.46■□□□□ 0.23
SYMPK-201ENST00000245934 IPO9Q96P70 1041 aaKnown RBP16.46■□□□□ 0.23
SYMPK-201ENST00000245934 ARID3AQ99856 593 aa16.45■□□□□ 0.22
SYMPK-201ENST00000245934 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
SYMPK-201ENST00000245934 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
SYMPK-201ENST00000245934 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
SYMPK-201ENST00000245934 PKNOX2Q96KN3 472 aa16.44■□□□□ 0.22
SYMPK-201ENST00000245934 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
SYMPK-201ENST00000245934 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
SYMPK-201ENST00000245934 MIA2Q96PC5 1412 aa16.43■□□□□ 0.22
SYMPK-201ENST00000245934 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
SYMPK-201ENST00000245934 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
SYMPK-201ENST00000245934 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
SYMPK-201ENST00000245934 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
SYMPK-201ENST00000245934 HSP90AA2PQ14568 343 aaPredicted RBP16.42■□□□□ 0.22
SYMPK-201ENST00000245934 CENPJQ9HC77 1338 aaPredicted RBP16.42■□□□□ 0.22
SYMPK-201ENST00000245934 SLC12A5Q9H2X9 1139 aa16.42■□□□□ 0.22
SYMPK-201ENST00000245934 NUTM2GQ5VZR2 741 aa16.42■□□□□ 0.22
SYMPK-201ENST00000245934 WDR62O43379 1518 aa16.41■□□□□ 0.22
SYMPK-201ENST00000245934 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
SYMPK-201ENST00000245934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.41■□□□□ 0.223e-6■■■■□ 26.4
SYMPK-201ENST00000245934 HMOX1P09601 288 aa16.41■□□□□ 0.22
SYMPK-201ENST00000245934 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
SYMPK-201ENST00000245934 CDK11BP21127 795 aaKnown RBP16.4■□□□□ 0.22
SYMPK-201ENST00000245934 DAPK1P53355 1430 aa16.4■□□□□ 0.22
SYMPK-201ENST00000245934 AMPHP49418 695 aa16.4■□□□□ 0.22
SYMPK-201ENST00000245934 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
SYMPK-201ENST00000245934 EIF3AQ14152 1382 aaKnown RBP16.4■□□□□ 0.22
SYMPK-201ENST00000245934 ARHGEF11O15085 1522 aa16.39■□□□□ 0.22
SYMPK-201ENST00000245934 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.22
SYMPK-201ENST00000245934 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
SYMPK-201ENST00000245934 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
SYMPK-201ENST00000245934 MFAP1P55081 439 aaKnown RBP16.38■□□□□ 0.21
SYMPK-201ENST00000245934 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
SYMPK-201ENST00000245934 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
SYMPK-201ENST00000245934 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
SYMPK-201ENST00000245934 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
SYMPK-201ENST00000245934 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms