RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
SSPN-201ENST00000242729 UHRF1BP1Q6BDS2 1440 aa22.72■■□□□ 1.23
SSPN-201ENST00000242729 SHANK2Q9UPX8 1470 aa22.71■■□□□ 1.23
SSPN-201ENST00000242729 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
SSPN-201ENST00000242729 PLEKHH2Q8IVE3 1493 aa22.7■■□□□ 1.22
SSPN-201ENST00000242729 ERICH6Q7L0X2 663 aa22.7■■□□□ 1.22
SSPN-201ENST00000242729 SMG6Q86US8 1419 aaKnown RBP22.68■■□□□ 1.22
SSPN-201ENST00000242729 CDC42BPBQ9Y5S2 1711 aa22.68■■□□□ 1.22
SSPN-201ENST00000242729 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
SSPN-201ENST00000242729 ERICH6BQ5W0A0 696 aa22.67■■□□□ 1.22
SSPN-201ENST00000242729 TTC37Q6PGP7 1564 aa22.66■■□□□ 1.22
SSPN-201ENST00000242729 MYT1LQ9UL68 1186 aa22.66■■□□□ 1.22
SSPN-201ENST00000242729 CDCA7LQ96GN5 454 aa22.65■■□□□ 1.22
SSPN-201ENST00000242729 PLA2R1Q13018 1463 aa22.65■■□□□ 1.22
SSPN-201ENST00000242729 ARID4BQ4LE39 1312 aaPredicted RBP22.65■■□□□ 1.22
SSPN-201ENST00000242729 PANK3Q9H999 370 aa22.64■■□□□ 1.22
SSPN-201ENST00000242729 DISP3Q9P2K9 1392 aa22.64■■□□□ 1.21
SSPN-201ENST00000242729 PRAG1Q86YV5 1406 aa22.63■■□□□ 1.21
SSPN-201ENST00000242729 AFAP1Q8N556 730 aa22.63■■□□□ 1.21
SSPN-201ENST00000242729 ARHGEF12Q9NZN5 1544 aa22.61■■□□□ 1.21
SSPN-201ENST00000242729 RALBP1Q15311 655 aa22.61■■□□□ 1.21
SSPN-201ENST00000242729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.6■■□□□ 1.21
SSPN-201ENST00000242729 FANCIQ9NVI1 1328 aa22.6■■□□□ 1.21
SSPN-201ENST00000242729 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
SSPN-201ENST00000242729 A2MP01023 1474 aa22.59■■□□□ 1.21
SSPN-201ENST00000242729 KTN1Q86UP2 1357 aaKnown RBP22.59■■□□□ 1.21
SSPN-201ENST00000242729 ARHGEF5Q12774 1597 aa22.59■■□□□ 1.21
SSPN-201ENST00000242729 RSPH4AQ5TD94 716 aa22.59■■□□□ 1.21
SSPN-201ENST00000242729 PLIN1O60240 522 aa22.58■■□□□ 1.21
SSPN-201ENST00000242729 EXOC6Q8TAG9 804 aa22.58■■□□□ 1.21
SSPN-201ENST00000242729 CHD1O14646 1710 aa22.58■■□□□ 1.21
SSPN-201ENST00000242729 PREX2Q70Z35 1606 aa22.58■■□□□ 1.2
SSPN-201ENST00000242729 TESK2Q96S53 571 aa22.58■■□□□ 1.2
SSPN-201ENST00000242729 PER1O15534 1290 aaPredicted RBP22.57■■□□□ 1.2
SSPN-201ENST00000242729 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
SSPN-201ENST00000242729 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
SSPN-201ENST00000242729 SKAP1Q86WV1 359 aa22.53■■□□□ 1.2
SSPN-201ENST00000242729 LRPPRCP42704 1394 aaKnown RBP22.53■■□□□ 1.2
SSPN-201ENST00000242729 RCAN3Q9UKA8 241 aa22.52■■□□□ 1.2
SSPN-201ENST00000242729 EFCAB2Q5VUJ9 269 aa22.52■■□□□ 1.2
SSPN-201ENST00000242729 TRAPPC8Q9Y2L5 1435 aa22.52■■□□□ 1.19
SSPN-201ENST00000242729 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
SSPN-201ENST00000242729 TMF1P82094 1093 aa22.5■■□□□ 1.19
SSPN-201ENST00000242729 RNF123Q5XPI4 1314 aa22.5■■□□□ 1.19
SSPN-201ENST00000242729 PAK3O75914 559 aaPredicted RBP22.49■■□□□ 1.19
SSPN-201ENST00000242729 TRPM1Q7Z4N2 1603 aa22.48■■□□□ 1.19
SSPN-201ENST00000242729 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
SSPN-201ENST00000242729 PARD3Q8TEW0 1356 aa22.48■■□□□ 1.19
SSPN-201ENST00000242729 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
SSPN-201ENST00000242729 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
SSPN-201ENST00000242729 NBR1Q14596 966 aa22.47■■□□□ 1.19
SSPN-201ENST00000242729 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
SSPN-201ENST00000242729 ADAMTS8Q9UP79 889 aa22.44■■□□□ 1.18
SSPN-201ENST00000242729 ABCC2Q92887 1545 aa22.43■■□□□ 1.18
SSPN-201ENST00000242729 KIF3BO15066 747 aa22.42■■□□□ 1.18
SSPN-201ENST00000242729 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
SSPN-201ENST00000242729 KNSTRNQ9Y448 316 aa22.4■■□□□ 1.18
SSPN-201ENST00000242729 PLCH2O75038 1416 aa22.4■■□□□ 1.18
SSPN-201ENST00000242729 MYO5CQ9NQX4 1742 aa22.4■■□□□ 1.18
SSPN-201ENST00000242729 GPRASP1Q5JY77 1395 aa22.39■■□□□ 1.17
SSPN-201ENST00000242729 E9PCH4 1651 aa22.39■■□□□ 1.17
SSPN-201ENST00000242729 CCDC146Q8IYE0 955 aa22.38■■□□□ 1.17
SSPN-201ENST00000242729 UNC13BO14795 1591 aa22.38■■□□□ 1.17
SSPN-201ENST00000242729 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
SSPN-201ENST00000242729 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
SSPN-201ENST00000242729 C20orf194Q5TEA3 1177 aa22.37■■□□□ 1.17
SSPN-201ENST00000242729 NOP58Q9Y2X3 529 aaKnown RBP22.36■■□□□ 1.17
SSPN-201ENST00000242729 CFAP70Q5T0N1 1121 aa22.34■■□□□ 1.17
SSPN-201ENST00000242729 CRBNQ96SW2 442 aa22.34■■□□□ 1.17
SSPN-201ENST00000242729 PRDM15P57071 1507 aaPredicted RBP22.34■■□□□ 1.17
SSPN-201ENST00000242729 IQGAP3Q86VI3 1631 aa22.34■■□□□ 1.17
SSPN-201ENST00000242729 PPP2R1AP30153 589 aa22.33■■□□□ 1.17
SSPN-201ENST00000242729 WDR43Q15061 677 aaKnown RBP eCLIP22.33■■□□□ 1.17
SSPN-201ENST00000242729 MAGI2Q86UL8 1455 aa22.33■■□□□ 1.16
SSPN-201ENST00000242729 ZCCHC11Q5TAX3 1644 aaKnown RBP22.32■■□□□ 1.16
SSPN-201ENST00000242729 ANP32AP39687 249 aaKnown RBP22.32■■□□□ 1.16
SSPN-201ENST00000242729 MAST1Q9Y2H9 1570 aa22.31■■□□□ 1.16
SSPN-201ENST00000242729 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
SSPN-201ENST00000242729 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
SSPN-201ENST00000242729 PLXNC1O60486 1568 aa22.29■■□□□ 1.16
SSPN-201ENST00000242729 TNNT2P45379 298 aaPredicted RBP22.29■■□□□ 1.16
SSPN-201ENST00000242729 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
SSPN-201ENST00000242729 PDE3BQ13370 1112 aa22.27■■□□□ 1.16
SSPN-201ENST00000242729 NUTM2DQ5VT03 806 aaPredicted RBP22.27■■□□□ 1.16
SSPN-201ENST00000242729 ADGRF5Q8IZF2 1346 aa22.27■■□□□ 1.16
SSPN-201ENST00000242729 UGGT1Q9NYU2 1555 aa22.26■■□□□ 1.15
SSPN-201ENST00000242729 ATP10AO60312 1499 aa22.26■■□□□ 1.15
SSPN-201ENST00000242729 ABCC1P33527 1531 aa22.26■■□□□ 1.15
SSPN-201ENST00000242729 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
SSPN-201ENST00000242729 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
SSPN-201ENST00000242729 WDR7Q9Y4E6 1490 aa22.25■■□□□ 1.15
SSPN-201ENST00000242729 IPO9Q96P70 1041 aaKnown RBP22.23■■□□□ 1.15
SSPN-201ENST00000242729 WASHC2CQ9Y4E1 1318 aa22.22■■□□□ 1.15
SSPN-201ENST00000242729 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
SSPN-201ENST00000242729 PDE4AP27815 886 aa22.21■■□□□ 1.15
SSPN-201ENST00000242729 GGT6Q6P531 493 aa22.21■■□□□ 1.15
SSPN-201ENST00000242729 SPINK5Q9NQ38 1064 aaPredicted RBP22.21■■□□□ 1.15
SSPN-201ENST00000242729 APAF1O14727 1248 aa22.2■■□□□ 1.14
SSPN-201ENST00000242729 EIF2AK4Q9P2K8 1649 aaKnown RBP22.2■■□□□ 1.14
SSPN-201ENST00000242729 FANCAO15360 1455 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms