RNA–Protein interactions for RNA: ENST00000238892.3

CRIPT-201, Transcript of CXXC repeat containing interactor of PDZ3 domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIPT, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIPT-201ENST00000238892 MED14O60244 1454 aa13.63□□□□□ -0.23
CRIPT-201ENST00000238892 ABCC1P33527 1531 aa13.63□□□□□ -0.23
CRIPT-201ENST00000238892 CLTCQ00610 1675 aaKnown RBP13.62□□□□□ -0.23
CRIPT-201ENST00000238892 MYT1LQ9UL68 1186 aa13.62□□□□□ -0.23
CRIPT-201ENST00000238892 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
CRIPT-201ENST00000238892 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
CRIPT-201ENST00000238892 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
CRIPT-201ENST00000238892 PLEKHH2Q8IVE3 1493 aa13.6□□□□□ -0.23
CRIPT-201ENST00000238892 CDC42BPBQ9Y5S2 1711 aa13.59□□□□□ -0.23
CRIPT-201ENST00000238892 NPHP4O75161 1426 aaPredicted RBP13.59□□□□□ -0.23
CRIPT-201ENST00000238892 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
CRIPT-201ENST00000238892 IQGAP1P46940 1657 aa13.58□□□□□ -0.24
CRIPT-201ENST00000238892 AFAP1Q8N556 730 aa13.58□□□□□ -0.24
CRIPT-201ENST00000238892 LRRIQ1Q96JM4 1722 aa13.57□□□□□ -0.24
CRIPT-201ENST00000238892 FAM135AQ9P2D6 1515 aa13.57□□□□□ -0.24
CRIPT-201ENST00000238892 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
CRIPT-201ENST00000238892 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
CRIPT-201ENST00000238892 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
CRIPT-201ENST00000238892 ANKLE2Q86XL3 938 aa13.56□□□□□ -0.24
CRIPT-201ENST00000238892 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
CRIPT-201ENST00000238892 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
CRIPT-201ENST00000238892 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
CRIPT-201ENST00000238892 STRCP1A6NGW2 1772 aa13.52□□□□□ -0.24
CRIPT-201ENST00000238892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
CRIPT-201ENST00000238892 PLXNC1O60486 1568 aa13.51□□□□□ -0.25
CRIPT-201ENST00000238892 JCADQ9P266 1359 aa13.51□□□□□ -0.25
CRIPT-201ENST00000238892 NLRP1Q9C000 1473 aa13.51□□□□□ -0.25
CRIPT-201ENST00000238892 GPATCH8Q9UKJ3 1502 aaKnown RBP13.51□□□□□ -0.25
CRIPT-201ENST00000238892 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
CRIPT-201ENST00000238892 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
CRIPT-201ENST00000238892 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
CRIPT-201ENST00000238892 TNRQ92752 1358 aa13.49□□□□□ -0.25
CRIPT-201ENST00000238892 THEMISQ8N1K5 641 aaPredicted RBP13.49□□□□□ -0.25
CRIPT-201ENST00000238892 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
CRIPT-201ENST00000238892 ATP7AQ04656 1500 aa13.48□□□□□ -0.25
CRIPT-201ENST00000238892 SYCP2Q9BX26 1530 aa13.48□□□□□ -0.25
CRIPT-201ENST00000238892 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
CRIPT-201ENST00000238892 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
CRIPT-201ENST00000238892 INO80Q9ULG1 1556 aaPredicted RBP13.47□□□□□ -0.25
CRIPT-201ENST00000238892 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
CRIPT-201ENST00000238892 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
CRIPT-201ENST00000238892 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
CRIPT-201ENST00000238892 A2MP01023 1474 aa13.46□□□□□ -0.25
CRIPT-201ENST00000238892 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.26
CRIPT-201ENST00000238892 LRP5O75197 1615 aa13.45□□□□□ -0.26
CRIPT-201ENST00000238892 RTEL1-TNFRSF6BF6WH68 1400 aa13.45□□□□□ -0.26
CRIPT-201ENST00000238892 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
CRIPT-201ENST00000238892 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
CRIPT-201ENST00000238892 PHLPP1O60346 1717 aa13.45□□□□□ -0.26
CRIPT-201ENST00000238892 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
CRIPT-201ENST00000238892 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
CRIPT-201ENST00000238892 RXRBP28702 533 aa13.44□□□□□ -0.26
CRIPT-201ENST00000238892 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
CRIPT-201ENST00000238892 PZPP20742 1482 aa13.44□□□□□ -0.26
CRIPT-201ENST00000238892 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
CRIPT-201ENST00000238892 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
CRIPT-201ENST00000238892 ZNF777Q9ULD5 760 aaPredicted RBP13.43□□□□□ -0.26
CRIPT-201ENST00000238892 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
CRIPT-201ENST00000238892 DIEXFQ68CQ4 756 aaKnown RBP13.41□□□□□ -0.26
CRIPT-201ENST00000238892 HNRNPMP52272 730 aaKnown RBP eCLIP13.4□□□□□ -0.26
CRIPT-201ENST00000238892 SHPRHQ149N8 1683 aa13.4□□□□□ -0.27
CRIPT-201ENST00000238892 IFFO2Q5TF58 517 aa13.4□□□□□ -0.27
CRIPT-201ENST00000238892 MEX3CQ5U5Q3 659 aaKnown RBP13.4□□□□□ -0.27
CRIPT-201ENST00000238892 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
CRIPT-201ENST00000238892 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
CRIPT-201ENST00000238892 SETBP1Q9Y6X0 1596 aa13.38□□□□□ -0.27
CRIPT-201ENST00000238892 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
CRIPT-201ENST00000238892 DHX29Q7Z478 1369 aaKnown RBP13.37□□□□□ -0.27
CRIPT-201ENST00000238892 MBD5Q9P267 1494 aa13.37□□□□□ -0.27
CRIPT-201ENST00000238892 COL16A1Q07092 1604 aaPredicted RBP13.37□□□□□ -0.27
CRIPT-201ENST00000238892 ABCC3O15438 1527 aa13.36□□□□□ -0.27
CRIPT-201ENST00000238892 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
CRIPT-201ENST00000238892 LRP6O75581 1613 aa13.36□□□□□ -0.27
CRIPT-201ENST00000238892 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
CRIPT-201ENST00000238892 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.28
CRIPT-201ENST00000238892 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
CRIPT-201ENST00000238892 MSH5O43196 834 aa13.33□□□□□ -0.28
CRIPT-201ENST00000238892 RGS12O14924 1447 aa13.33□□□□□ -0.28
CRIPT-201ENST00000238892 GGT6Q6P531 493 aa13.32□□□□□ -0.28
CRIPT-201ENST00000238892 CCDC125Q86Z20 511 aa13.31□□□□□ -0.28
CRIPT-201ENST00000238892 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
CRIPT-201ENST00000238892 NCOA2Q15596 1464 aa13.31□□□□□ -0.28
CRIPT-201ENST00000238892 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
CRIPT-201ENST00000238892 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
CRIPT-201ENST00000238892 AHDC1Q5TGY3 1603 aaPredicted RBP13.3□□□□□ -0.28
CRIPT-201ENST00000238892 NWD1Q149M9 1564 aa13.3□□□□□ -0.28
CRIPT-201ENST00000238892 NHSL1Q5SYE7 1610 aa13.29□□□□□ -0.28
CRIPT-201ENST00000238892 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
CRIPT-201ENST00000238892 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
CRIPT-201ENST00000238892 MAST1Q9Y2H9 1570 aa13.28□□□□□ -0.28
CRIPT-201ENST00000238892 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
CRIPT-201ENST00000238892 TSPY4P0CV99 314 aa13.27□□□□□ -0.28
CRIPT-201ENST00000238892 TSPY10P0CW01 314 aa13.27□□□□□ -0.28
CRIPT-201ENST00000238892 SLIT1O75093 1534 aa13.27□□□□□ -0.28
CRIPT-201ENST00000238892 MSH6P52701 1360 aa13.27□□□□□ -0.29
CRIPT-201ENST00000238892 ARHGAP23Q9P227 1491 aa13.26□□□□□ -0.29
CRIPT-201ENST00000238892 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
CRIPT-201ENST00000238892 NUTM2BA6NNL0 878 aaPredicted RBP13.25□□□□□ -0.29
CRIPT-201ENST00000238892 NUTM2EB1AL46 878 aaPredicted RBP13.25□□□□□ -0.29
CRIPT-201ENST00000238892 KIF3BO15066 747 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms