RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
SLC1A4-201ENST00000234256 PMFBP1Q8TBY8 1022 aa21.65■■□□□ 1.06
SLC1A4-201ENST00000234256 TERF2IPQ9NYB0 399 aa21.64■■□□□ 1.05
SLC1A4-201ENST00000234256 LRRC9Q6ZRR7 1453 aa21.63■■□□□ 1.05
SLC1A4-201ENST00000234256 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
SLC1A4-201ENST00000234256 HDGFP51858 240 aaKnown RBP21.63■■□□□ 1.05
SLC1A4-201ENST00000234256 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.63■■□□□ 1.05
SLC1A4-201ENST00000234256 CFTRP13569 1480 aa21.63■■□□□ 1.05
SLC1A4-201ENST00000234256 SLC4A10Q6U841 1118 aa21.62■■□□□ 1.05
SLC1A4-201ENST00000234256 EIF3AQ14152 1382 aaKnown RBP21.62■■□□□ 1.05
SLC1A4-201ENST00000234256 L1TD1Q5T7N2 865 aaKnown RBP21.62■■□□□ 1.05
SLC1A4-201ENST00000234256 UACAQ9BZF9 1416 aa21.61■■□□□ 1.05
SLC1A4-201ENST00000234256 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
SLC1A4-201ENST00000234256 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
SLC1A4-201ENST00000234256 PTPRGP23470 1445 aa21.59■■□□□ 1.05
SLC1A4-201ENST00000234256 GOLGA6L4A6NEF3 574 aa21.59■■□□□ 1.05
SLC1A4-201ENST00000234256 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
SLC1A4-201ENST00000234256 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
SLC1A4-201ENST00000234256 CDCA7LQ96GN5 454 aa21.58■■□□□ 1.04
SLC1A4-201ENST00000234256 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
SLC1A4-201ENST00000234256 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
SLC1A4-201ENST00000234256 CALD1Q05682 793 aaKnown RBP21.56■■□□□ 1.04
SLC1A4-201ENST00000234256 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
SLC1A4-201ENST00000234256 NOL8Q76FK4 1167 aaKnown RBP21.56■■□□□ 1.04
SLC1A4-201ENST00000234256 MCCP23508 829 aa21.55■■□□□ 1.04
SLC1A4-201ENST00000234256 FAM161AQ3B820 660 aa21.55■■□□□ 1.04
SLC1A4-201ENST00000234256 LTV1Q96GA3 475 aaPredicted RBP21.55■■□□□ 1.04
SLC1A4-201ENST00000234256 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
SLC1A4-201ENST00000234256 GBP4Q96PP9 640 aa21.55■■□□□ 1.04
SLC1A4-201ENST00000234256 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
SLC1A4-201ENST00000234256 MINK1Q8N4C8 1332 aaPredicted RBP21.53■■□□□ 1.04
SLC1A4-201ENST00000234256 E9PSI1 815 aa21.53■■□□□ 1.04
SLC1A4-201ENST00000234256 MSNP26038 577 aaKnown RBP21.52■■□□□ 1.04
SLC1A4-201ENST00000234256 STK31Q9BXU1 1019 aa21.51■■□□□ 1.03
SLC1A4-201ENST00000234256 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
SLC1A4-201ENST00000234256 KIAA1211Q6ZU35 1233 aa21.51■■□□□ 1.03
SLC1A4-201ENST00000234256 TRIM6-TRIM34B2RNG4 842 aa21.51■■□□□ 1.03
SLC1A4-201ENST00000234256 ZNF330Q9Y3S2 320 aaPredicted RBP21.5■■□□□ 1.03
SLC1A4-201ENST00000234256 NBPF1Q3BBV0 1214 aa21.5■■□□□ 1.03
SLC1A4-201ENST00000234256 ADAMTS8Q9UP79 889 aa21.49■■□□□ 1.03
SLC1A4-201ENST00000234256 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
SLC1A4-201ENST00000234256 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
SLC1A4-201ENST00000234256 NCOA2Q15596 1464 aa21.49■■□□□ 1.03
SLC1A4-201ENST00000234256 FOXD4L5Q5VV16 416 aaPredicted RBP21.49■■□□□ 1.03
SLC1A4-201ENST00000234256 FOXD4L4Q8WXT5 416 aaPredicted RBP21.49■■□□□ 1.03
SLC1A4-201ENST00000234256 CNTLNQ9NXG0 1405 aa21.48■■□□□ 1.03
SLC1A4-201ENST00000234256 NGDNQ8NEJ9 315 aaKnown RBP21.48■■□□□ 1.03
SLC1A4-201ENST00000234256 ANKRD45Q5TZF3 282 aa21.48■■□□□ 1.03
SLC1A4-201ENST00000234256 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
SLC1A4-201ENST00000234256 ZKSCAN2Q63HK3 967 aa21.47■■□□□ 1.03
SLC1A4-201ENST00000234256 GOLGA6L3A6NEY3 463 aa21.46■■□□□ 1.03
SLC1A4-201ENST00000234256 ARID3AQ99856 593 aa21.46■■□□□ 1.03
SLC1A4-201ENST00000234256 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
SLC1A4-201ENST00000234256 CGNL1Q0VF96 1302 aa21.46■■□□□ 1.03
SLC1A4-201ENST00000234256 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.03
SLC1A4-201ENST00000234256 AMPHP49418 695 aa21.44■■□□□ 1.02
SLC1A4-201ENST00000234256 TMEM132EQ6IEE7 984 aa21.44■■□□□ 1.02
SLC1A4-201ENST00000234256 AFAP1Q8N556 730 aa21.43■■□□□ 1.02
SLC1A4-201ENST00000234256 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
SLC1A4-201ENST00000234256 TULP1O00294 542 aaPredicted RBP21.43■■□□□ 1.02
SLC1A4-201ENST00000234256 VGFO15240 615 aaPredicted RBP21.43■■□□□ 1.02
SLC1A4-201ENST00000234256 PANK1Q8TE04 598 aa21.43■■□□□ 1.02
SLC1A4-201ENST00000234256 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
SLC1A4-201ENST00000234256 CSB-PGBD3P0DP91 1061 aa21.41■■□□□ 1.02
SLC1A4-201ENST00000234256 CFAP44Q96MT7 982 aa21.41■■□□□ 1.02
SLC1A4-201ENST00000234256 HMMRO75330 724 aa21.41■■□□□ 1.02
SLC1A4-201ENST00000234256 FOXD4L6Q3SYB3 417 aaPredicted RBP21.41■■□□□ 1.02
SLC1A4-201ENST00000234256 FOXD4L3Q6VB84 417 aaPredicted RBP21.41■■□□□ 1.02
SLC1A4-201ENST00000234256 CUX1P39880 1505 aa21.4■■□□□ 1.02
SLC1A4-201ENST00000234256 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
SLC1A4-201ENST00000234256 NPHP1O15259 732 aa21.4■■□□□ 1.02
SLC1A4-201ENST00000234256 DRC7Q8IY82 874 aa21.39■■□□□ 1.02
SLC1A4-201ENST00000234256 CFAP70Q5T0N1 1121 aa21.39■■□□□ 1.01
SLC1A4-201ENST00000234256 GSE1Q14687 1217 aa21.39■■□□□ 1.01
SLC1A4-201ENST00000234256 GGNBP2Q9H3C7 697 aa21.38■■□□□ 1.01
SLC1A4-201ENST00000234256 USP35Q9P2H5 1018 aa21.38■■□□□ 1.01
SLC1A4-201ENST00000234256 CDK11BP21127 795 aaKnown RBP21.38■■□□□ 1.01
SLC1A4-201ENST00000234256 RIPK4P57078 832 aa21.38■■□□□ 1.01
SLC1A4-201ENST00000234256 AKNAQ7Z591 1439 aa21.35■■□□□ 1.01
SLC1A4-201ENST00000234256 LMOD3Q0VAK6 560 aa21.35■■□□□ 1.01
SLC1A4-201ENST00000234256 DZIP1LQ8IYY4 767 aaKnown RBP21.35■■□□□ 1.01
SLC1A4-201ENST00000234256 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
SLC1A4-201ENST00000234256 CHMP3Q9Y3E7 222 aa21.34■■□□□ 1.01
SLC1A4-201ENST00000234256 NECTIN2Q92692 538 aa21.34■■□□□ 1.01
SLC1A4-201ENST00000234256 LNPKQ9C0E8 428 aa21.34■■□□□ 1.01
SLC1A4-201ENST00000234256 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
SLC1A4-201ENST00000234256 DIAPH1O60610 1272 aaKnown RBP21.33■■□□□ 1.01
SLC1A4-201ENST00000234256 HMOX1P09601 288 aa21.33■■□□□ 1.01
SLC1A4-201ENST00000234256 RILPL2Q969X0 211 aa21.33■■□□□ 1.01
SLC1A4-201ENST00000234256 MTHFSP49914 203 aa21.33■■□□□ 1
SLC1A4-201ENST00000234256 COG3Q96JB2 828 aa21.33■■□□□ 1
SLC1A4-201ENST00000234256 NESP48681 1621 aa21.32■■□□□ 1
SLC1A4-201ENST00000234256 CABP2Q9NPB3 220 aa21.31■■□□□ 1
SLC1A4-201ENST00000234256 RUNDC1Q96C34 613 aa21.31■■□□□ 1
SLC1A4-201ENST00000234256 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
SLC1A4-201ENST00000234256 DDX49Q9Y6V7 483 aaKnown RBP21.3■■□□□ 1
SLC1A4-201ENST00000234256 WDR97A6NE52 1622 aa21.3■■□□□ 1
SLC1A4-201ENST00000234256 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
SLC1A4-201ENST00000234256 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
SLC1A4-201ENST00000234256 EID1Q9Y6B2 187 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms