RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.89
TMEM30A-201ENST00000230461 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.89
TMEM30A-201ENST00000230461 ABCC5O15440 1437 aa20.58■□□□□ 0.88
TMEM30A-201ENST00000230461 CCDC141Q6ZP82 1450 aa20.57■□□□□ 0.88
TMEM30A-201ENST00000230461 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
TMEM30A-201ENST00000230461 EVC2Q86UK5 1308 aa20.56■□□□□ 0.88
TMEM30A-201ENST00000230461 CAMSAP2Q08AD1 1489 aa20.56■□□□□ 0.88
TMEM30A-201ENST00000230461 PPP4R2Q9NY27 417 aa20.55■□□□□ 0.88
TMEM30A-201ENST00000230461 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
TMEM30A-201ENST00000230461 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
TMEM30A-201ENST00000230461 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
TMEM30A-201ENST00000230461 PAK3O75914 559 aaPredicted RBP20.54■□□□□ 0.88
TMEM30A-201ENST00000230461 WDR62O43379 1518 aa20.54■□□□□ 0.88
TMEM30A-201ENST00000230461 KIF14Q15058 1648 aa20.53■□□□□ 0.88
TMEM30A-201ENST00000230461 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
TMEM30A-201ENST00000230461 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
TMEM30A-201ENST00000230461 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
TMEM30A-201ENST00000230461 CD109Q6YHK3 1445 aa20.52■□□□□ 0.88
TMEM30A-201ENST00000230461 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.52■□□□□ 0.87
TMEM30A-201ENST00000230461 MINK1Q8N4C8 1332 aaPredicted RBP20.52■□□□□ 0.87
TMEM30A-201ENST00000230461 NGDNQ8NEJ9 315 aaKnown RBP20.51■□□□□ 0.87
TMEM30A-201ENST00000230461 NUTM2FA1L443 756 aa20.51■□□□□ 0.87
TMEM30A-201ENST00000230461 CENPJQ9HC77 1338 aaPredicted RBP20.51■□□□□ 0.87
TMEM30A-201ENST00000230461 UGGT2Q9NYU1 1516 aa20.5■□□□□ 0.87
TMEM30A-201ENST00000230461 NBPF8Q3BBV2 869 aa20.5■□□□□ 0.87
TMEM30A-201ENST00000230461 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
TMEM30A-201ENST00000230461 AKNAQ7Z591 1439 aa20.49■□□□□ 0.87
TMEM30A-201ENST00000230461 NCOA1Q15788 1441 aa20.49■□□□□ 0.87
TMEM30A-201ENST00000230461 ATP10BO94823 1461 aa20.48■□□□□ 0.87
TMEM30A-201ENST00000230461 CFAP70Q5T0N1 1121 aa20.48■□□□□ 0.87
TMEM30A-201ENST00000230461 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
TMEM30A-201ENST00000230461 MS4A1P11836 297 aa20.47■□□□□ 0.87
TMEM30A-201ENST00000230461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.47■□□□□ 0.87
TMEM30A-201ENST00000230461 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
TMEM30A-201ENST00000230461 CGNL1Q0VF96 1302 aa20.45■□□□□ 0.86
TMEM30A-201ENST00000230461 GPATCH8Q9UKJ3 1502 aaKnown RBP20.45■□□□□ 0.86
TMEM30A-201ENST00000230461 TMEM132EQ6IEE7 984 aa20.45■□□□□ 0.86
TMEM30A-201ENST00000230461 NBPF1Q3BBV0 1214 aa20.45■□□□□ 0.86
TMEM30A-201ENST00000230461 RAPGEF6Q8TEU7 1601 aa20.45■□□□□ 0.86
TMEM30A-201ENST00000230461 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
TMEM30A-201ENST00000230461 CTTNBP2Q8WZ74 1663 aa20.44■□□□□ 0.86
TMEM30A-201ENST00000230461 SLC52A1Q9NWF4 448 aa20.44■□□□□ 0.86
TMEM30A-201ENST00000230461 ADGRL1O94910 1474 aa20.43■□□□□ 0.86
TMEM30A-201ENST00000230461 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
TMEM30A-201ENST00000230461 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
TMEM30A-201ENST00000230461 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
TMEM30A-201ENST00000230461 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
TMEM30A-201ENST00000230461 NUP160Q12769 1436 aa20.41■□□□□ 0.86
TMEM30A-201ENST00000230461 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
TMEM30A-201ENST00000230461 ANKRD30BQ9BXX2 1392 aa20.4■□□□□ 0.86
TMEM30A-201ENST00000230461 PDE3BQ13370 1112 aa20.39■□□□□ 0.86
TMEM30A-201ENST00000230461 KIAA0556O60303 1618 aa20.39■□□□□ 0.86
TMEM30A-201ENST00000230461 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
TMEM30A-201ENST00000230461 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.85
TMEM30A-201ENST00000230461 CALD1Q05682 793 aaKnown RBP20.39■□□□□ 0.85
TMEM30A-201ENST00000230461 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
TMEM30A-201ENST00000230461 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
TMEM30A-201ENST00000230461 FANCAO15360 1455 aa20.35■□□□□ 0.85
TMEM30A-201ENST00000230461 AMPHP49418 695 aa20.34■□□□□ 0.85
TMEM30A-201ENST00000230461 COG3Q96JB2 828 aa20.34■□□□□ 0.85
TMEM30A-201ENST00000230461 ARXQ96QS3 562 aa20.34■□□□□ 0.85
TMEM30A-201ENST00000230461 ERICH6BQ5W0A0 696 aa20.33■□□□□ 0.85
TMEM30A-201ENST00000230461 PTPRKQ15262 1439 aa20.32■□□□□ 0.84
TMEM30A-201ENST00000230461 TXNDC2Q86VQ3 553 aa20.31■□□□□ 0.84
TMEM30A-201ENST00000230461 PLCH2O75038 1416 aa20.31■□□□□ 0.84
TMEM30A-201ENST00000230461 RPGRIP1LQ68CZ1 1315 aa20.31■□□□□ 0.84
TMEM30A-201ENST00000230461 CSB-PGBD3P0DP91 1061 aa20.31■□□□□ 0.84
TMEM30A-201ENST00000230461 DISP1Q96F81 1524 aa20.31■□□□□ 0.84
TMEM30A-201ENST00000230461 RGS3P49796 1198 aa20.31■□□□□ 0.84
TMEM30A-201ENST00000230461 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
TMEM30A-201ENST00000230461 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
TMEM30A-201ENST00000230461 CABP2Q9NPB3 220 aa20.29■□□□□ 0.84
TMEM30A-201ENST00000230461 ASXL2Q76L83 1435 aa20.29■□□□□ 0.84
TMEM30A-201ENST00000230461 ERBINQ96RT1 1412 aa20.29■□□□□ 0.84
TMEM30A-201ENST00000230461 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.84
TMEM30A-201ENST00000230461 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
TMEM30A-201ENST00000230461 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
TMEM30A-201ENST00000230461 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.83
TMEM30A-201ENST00000230461 LMOD3Q0VAK6 560 aa20.25■□□□□ 0.83
TMEM30A-201ENST00000230461 RRP7AQ9Y3A4 280 aaKnown RBP20.25■□□□□ 0.83
TMEM30A-201ENST00000230461 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
TMEM30A-201ENST00000230461 THEMISQ8N1K5 641 aaPredicted RBP20.25■□□□□ 0.83
TMEM30A-201ENST00000230461 DHX29Q7Z478 1369 aaKnown RBP20.24■□□□□ 0.83
TMEM30A-201ENST00000230461 PRAM1Q96QH2 718 aa20.24■□□□□ 0.83
TMEM30A-201ENST00000230461 POGZQ7Z3K3 1410 aa20.23■□□□□ 0.83
TMEM30A-201ENST00000230461 APAF1O14727 1248 aa20.23■□□□□ 0.83
TMEM30A-201ENST00000230461 WDR7Q9Y4E6 1490 aa20.21■□□□□ 0.83
TMEM30A-201ENST00000230461 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
TMEM30A-201ENST00000230461 DIAPH1O60610 1272 aaKnown RBP20.2■□□□□ 0.82
TMEM30A-201ENST00000230461 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
TMEM30A-201ENST00000230461 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
TMEM30A-201ENST00000230461 TCOF1Q13428 1488 aaKnown RBP20.19■□□□□ 0.82
TMEM30A-201ENST00000230461 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
TMEM30A-201ENST00000230461 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
TMEM30A-201ENST00000230461 SLC12A5Q9H2X9 1139 aa20.18■□□□□ 0.82
TMEM30A-201ENST00000230461 BRD4O60885 1362 aaPredicted RBP20.17■□□□□ 0.82
TMEM30A-201ENST00000230461 DDRGK1Q96HY6 314 aa20.17■□□□□ 0.82
TMEM30A-201ENST00000230461 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
TMEM30A-201ENST00000230461 ITSN2Q9NZM3 1697 aa20.17■□□□□ 0.82
TMEM30A-201ENST00000230461 E9PSI1 815 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms