RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 NUDCQ9Y266 331 aa19.77■□□□□ 0.75
CNOT3-201ENST00000221232 SAMD9LQ8IVG5 1584 aa19.76■□□□□ 0.75
CNOT3-201ENST00000221232 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
CNOT3-201ENST00000221232 ARID4BQ4LE39 1312 aaPredicted RBP19.75■□□□□ 0.75
CNOT3-201ENST00000221232 FAM135AQ9P2D6 1515 aa19.75■□□□□ 0.75
CNOT3-201ENST00000221232 PLEKHH2Q8IVE3 1493 aa19.75■□□□□ 0.75
CNOT3-201ENST00000221232 MYT1LQ9UL68 1186 aa19.74■□□□□ 0.75
CNOT3-201ENST00000221232 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
CNOT3-201ENST00000221232 ERICH6BQ5W0A0 696 aa19.73■□□□□ 0.75
CNOT3-201ENST00000221232 AFAP1Q8N556 730 aa19.71■□□□□ 0.75
CNOT3-201ENST00000221232 MYBBP1AQ9BQG0 1328 aaKnown RBP19.71■□□□□ 0.75
CNOT3-201ENST00000221232 CDC42BPBQ9Y5S2 1711 aa19.7■□□□□ 0.74
CNOT3-201ENST00000221232 PLA2R1Q13018 1463 aa19.69■□□□□ 0.74
CNOT3-201ENST00000221232 CCDC136Q96JN2 1154 aa19.69■□□□□ 0.74
CNOT3-201ENST00000221232 RALBP1Q15311 655 aa19.68■□□□□ 0.74
CNOT3-201ENST00000221232 PANK3Q9H999 370 aa19.68■□□□□ 0.74
CNOT3-201ENST00000221232 SMG6Q86US8 1419 aaKnown RBP19.68■□□□□ 0.74
CNOT3-201ENST00000221232 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
CNOT3-201ENST00000221232 EFCAB2Q5VUJ9 269 aa19.68■□□□□ 0.74
CNOT3-201ENST00000221232 ARHGEF5Q12774 1597 aa19.67■□□□□ 0.74
CNOT3-201ENST00000221232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■■□ 19.3
CNOT3-201ENST00000221232 PRAG1Q86YV5 1406 aa19.67■□□□□ 0.74
CNOT3-201ENST00000221232 POLR1AO95602 1720 aaPredicted RBP19.67■□□□□ 0.74
CNOT3-201ENST00000221232 ARHGEF12Q9NZN5 1544 aa19.67■□□□□ 0.74
CNOT3-201ENST00000221232 KDM5DQ9BY66 1539 aa19.66■□□□□ 0.74
CNOT3-201ENST00000221232 DISP3Q9P2K9 1392 aa19.64■□□□□ 0.74
CNOT3-201ENST00000221232 CHD1O14646 1710 aa19.64■□□□□ 0.73
CNOT3-201ENST00000221232 PER1O15534 1290 aaPredicted RBP19.63■□□□□ 0.73
CNOT3-201ENST00000221232 PREX2Q70Z35 1606 aa19.63■□□□□ 0.73
CNOT3-201ENST00000221232 TESK2Q96S53 571 aa19.63■□□□□ 0.73
CNOT3-201ENST00000221232 KTN1Q86UP2 1357 aaKnown RBP19.63■□□□□ 0.73
CNOT3-201ENST00000221232 A2MP01023 1474 aa19.63■□□□□ 0.73
CNOT3-201ENST00000221232 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
CNOT3-201ENST00000221232 CDCA7LQ96GN5 454 aa19.62■□□□□ 0.73
CNOT3-201ENST00000221232 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
CNOT3-201ENST00000221232 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
CNOT3-201ENST00000221232 TRAPPC8Q9Y2L5 1435 aa19.61■□□□□ 0.73
CNOT3-201ENST00000221232 SPAG9O60271 1321 aaKnown RBP19.6■□□□□ 0.73
CNOT3-201ENST00000221232 TMF1P82094 1093 aa19.59■□□□□ 0.73
CNOT3-201ENST00000221232 FANCIQ9NVI1 1328 aa19.57■□□□□ 0.72
CNOT3-201ENST00000221232 LRPPRCP42704 1394 aaKnown RBP19.56■□□□□ 0.72
CNOT3-201ENST00000221232 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
CNOT3-201ENST00000221232 EXOC6Q8TAG9 804 aa19.56■□□□□ 0.72
CNOT3-201ENST00000221232 PLCH2O75038 1416 aa19.55■□□□□ 0.72
CNOT3-201ENST00000221232 PLIN1O60240 522 aa19.54■□□□□ 0.72
CNOT3-201ENST00000221232 RCAN3Q9UKA8 241 aa19.54■□□□□ 0.72
CNOT3-201ENST00000221232 RNF123Q5XPI4 1314 aa19.54■□□□□ 0.72
CNOT3-201ENST00000221232 KIF3BO15066 747 aa19.54■□□□□ 0.72
CNOT3-201ENST00000221232 ERBINQ96RT1 1412 aa19.53■□□□□ 0.72
CNOT3-201ENST00000221232 PARD3Q8TEW0 1356 aa19.53■□□□□ 0.72
CNOT3-201ENST00000221232 RRP1P56182 461 aaKnown RBP19.51■□□□□ 0.71
CNOT3-201ENST00000221232 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
CNOT3-201ENST00000221232 GPRASP1Q5JY77 1395 aa19.49■□□□□ 0.71
CNOT3-201ENST00000221232 DUOX2Q9NRD8 1548 aa19.49■□□□□ 0.71
CNOT3-201ENST00000221232 KNSTRNQ9Y448 316 aa19.49■□□□□ 0.71
CNOT3-201ENST00000221232 ADAMTS8Q9UP79 889 aa19.48■□□□□ 0.71
CNOT3-201ENST00000221232 MYO5CQ9NQX4 1742 aa19.47■□□□□ 0.71
CNOT3-201ENST00000221232 CHGAP10645 457 aaKnown RBP19.46■□□□□ 0.71
CNOT3-201ENST00000221232 UNC13BO14795 1591 aa19.46■□□□□ 0.71
CNOT3-201ENST00000221232 COL17A1Q9UMD9 1497 aaPredicted RBP19.46■□□□□ 0.71
CNOT3-201ENST00000221232 SHROOM2Q13796 1616 aa19.45■□□□□ 0.7
CNOT3-201ENST00000221232 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
CNOT3-201ENST00000221232 CFAP70Q5T0N1 1121 aa19.44■□□□□ 0.7
CNOT3-201ENST00000221232 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-201ENST00000221232 SKAP1Q86WV1 359 aa19.43■□□□□ 0.7
CNOT3-201ENST00000221232 SCAPERQ9BY12 1400 aa19.43■□□□□ 0.7
CNOT3-201ENST00000221232 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
CNOT3-201ENST00000221232 IQGAP3Q86VI3 1631 aa19.42■□□□□ 0.7
CNOT3-201ENST00000221232 NPM2Q86SE8 214 aaKnown RBP19.41■□□□□ 0.7
CNOT3-201ENST00000221232 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
CNOT3-201ENST00000221232 WDR43Q15061 677 aaKnown RBP eCLIP19.41■□□□□ 0.7
CNOT3-201ENST00000221232 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
CNOT3-201ENST00000221232 CCDC146Q8IYE0 955 aa19.4■□□□□ 0.7
CNOT3-201ENST00000221232 PLXNC1O60486 1568 aa19.4■□□□□ 0.7
CNOT3-201ENST00000221232 PRDM15P57071 1507 aaPredicted RBP19.4■□□□□ 0.7
CNOT3-201ENST00000221232 PDE3BQ13370 1112 aa19.39■□□□□ 0.69
CNOT3-201ENST00000221232 E9PCH4 1651 aa19.39■□□□□ 0.69
CNOT3-201ENST00000221232 WASHC2CQ9Y4E1 1318 aa19.38■□□□□ 0.69
CNOT3-201ENST00000221232 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
CNOT3-201ENST00000221232 ABCC1P33527 1531 aa19.38■□□□□ 0.69
CNOT3-201ENST00000221232 ADGRF5Q8IZF2 1346 aa19.37■□□□□ 0.69
CNOT3-201ENST00000221232 NBR1Q14596 966 aa19.37■□□□□ 0.69
CNOT3-201ENST00000221232 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
CNOT3-201ENST00000221232 C20orf194Q5TEA3 1177 aa19.36■□□□□ 0.69
CNOT3-201ENST00000221232 CRBNQ96SW2 442 aa19.36■□□□□ 0.69
CNOT3-201ENST00000221232 ATP10AO60312 1499 aa19.36■□□□□ 0.69
CNOT3-201ENST00000221232 KANK1Q14678 1352 aa19.35■□□□□ 0.69
CNOT3-201ENST00000221232 GGT6Q6P531 493 aa19.35■□□□□ 0.69
CNOT3-201ENST00000221232 FANCAO15360 1455 aa19.34■□□□□ 0.69
CNOT3-201ENST00000221232 NUTM2DQ5VT03 806 aaPredicted RBP19.34■□□□□ 0.69
CNOT3-201ENST00000221232 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
CNOT3-201ENST00000221232 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.68
CNOT3-201ENST00000221232 ANP32AP39687 249 aaKnown RBP19.32■□□□□ 0.68
CNOT3-201ENST00000221232 CDCA8Q53HL2 280 aa19.32■□□□□ 0.68
CNOT3-201ENST00000221232 WDR7Q9Y4E6 1490 aa19.32■□□□□ 0.68
CNOT3-201ENST00000221232 UGGT1Q9NYU2 1555 aa19.3■□□□□ 0.68
CNOT3-201ENST00000221232 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
CNOT3-201ENST00000221232 TRAK1Q9UPV9 953 aa19.3■□□□□ 0.68
CNOT3-201ENST00000221232 EIF2AK4Q9P2K8 1649 aaKnown RBP19.3■□□□□ 0.68
CNOT3-201ENST00000221232 PLEKHH1Q9ULM0 1364 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms