RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 CCDC7Q96M83 1385 aa26.65■■□□□ 1.86
FMR1-201ENST00000218200 KIF7Q2M1P5 1343 aa26.63■■□□□ 1.85
FMR1-201ENST00000218200 DAPK1P53355 1430 aa26.63■■□□□ 1.85
FMR1-201ENST00000218200 PTPN23Q9H3S7 1636 aa26.63■■□□□ 1.85
FMR1-201ENST00000218200 KIF15Q9NS87 1388 aa26.61■■□□□ 1.85
FMR1-201ENST00000218200 SOX12O15370 315 aa26.61■■□□□ 1.85
FMR1-201ENST00000218200 PDE4AP27815 886 aa26.59■■□□□ 1.85
FMR1-201ENST00000218200 HSCBQ8IWL3 235 aa26.58■■□□□ 1.84
FMR1-201ENST00000218200 SPAG9O60271 1321 aaKnown RBP26.56■■□□□ 1.84
FMR1-201ENST00000218200 CCDC144AA2RUR9 1427 aa26.56■■□□□ 1.84
FMR1-201ENST00000218200 KTN1Q86UP2 1357 aaKnown RBP26.55■■□□□ 1.84
FMR1-201ENST00000218200 FOXD4L1Q9NU39 408 aa26.55■■□□□ 1.84
FMR1-201ENST00000218200 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
FMR1-201ENST00000218200 GRIN2AQ12879 1464 aa26.54■■□□□ 1.84
FMR1-201ENST00000218200 KANK1Q14678 1352 aa26.53■■□□□ 1.84
FMR1-201ENST00000218200 KIF3BO15066 747 aa26.53■■□□□ 1.84
FMR1-201ENST00000218200 MORC1Q86VD1 984 aa26.53■■□□□ 1.84
FMR1-201ENST00000218200 CNTLNQ9NXG0 1405 aa26.53■■□□□ 1.84
FMR1-201ENST00000218200 RALBP1Q15311 655 aa26.53■■□□□ 1.84
FMR1-201ENST00000218200 CTTNBP2Q8WZ74 1663 aa26.52■■□□□ 1.84
FMR1-201ENST00000218200 MFAP1P55081 439 aaKnown RBP26.52■■□□□ 1.84
FMR1-201ENST00000218200 BCL2L13Q9BXK5 485 aa26.52■■□□□ 1.84
FMR1-201ENST00000218200 ABCC5O15440 1437 aa26.51■■□□□ 1.83
FMR1-201ENST00000218200 PNNQ9H307 717 aaKnown RBP26.51■■□□□ 1.83
FMR1-201ENST00000218200 POGKQ9P215 609 aa26.49■■□□□ 1.83
FMR1-201ENST00000218200 ROCK1Q13464 1354 aa26.49■■□□□ 1.83
FMR1-201ENST00000218200 CFAP43Q8NDM7 1665 aa26.49■■□□□ 1.83
FMR1-201ENST00000218200 A0A0G2JS52 829 aa26.48■■□□□ 1.83
FMR1-201ENST00000218200 GGT6Q6P531 493 aa26.48■■□□□ 1.83
FMR1-201ENST00000218200 FANCIQ9NVI1 1328 aa26.48■■□□□ 1.83
FMR1-201ENST00000218200 U2AF1L5P0DN76 240 aaPredicted RBP26.48■■□□□ 1.83
FMR1-201ENST00000218200 U2AF1Q01081 240 aaKnown RBP eCLIP26.48■■□□□ 1.83
FMR1-201ENST00000218200 NLRP13Q86W25 1043 aa26.46■■□□□ 1.83
FMR1-201ENST00000218200 RRP7AQ9Y3A4 280 aaKnown RBP26.46■■□□□ 1.83
FMR1-201ENST00000218200 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
FMR1-201ENST00000218200 SYNJ2O15056 1496 aa26.46■■□□□ 1.83
FMR1-201ENST00000218200 L1TD1Q5T7N2 865 aaKnown RBP26.46■■□□□ 1.83
FMR1-201ENST00000218200 ANKRD30BQ9BXX2 1392 aa26.45■■□□□ 1.82
FMR1-201ENST00000218200 STK26Q9P289 416 aa26.45■■□□□ 1.82
FMR1-201ENST00000218200 CCDC184Q52MB2 194 aa26.44■■□□□ 1.82
FMR1-201ENST00000218200 AMER1Q5JTC6 1135 aaPredicted RBP26.44■■□□□ 1.82
FMR1-201ENST00000218200 KIAA1107Q9UPP5 1409 aa26.44■■□□□ 1.82
FMR1-201ENST00000218200 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
FMR1-201ENST00000218200 C11orf95C9JLR9 678 aaPredicted RBP26.44■■□□□ 1.82
FMR1-201ENST00000218200 CRBNQ96SW2 442 aa26.44■■□□□ 1.82
FMR1-201ENST00000218200 UGGT2Q9NYU1 1516 aa26.44■■□□□ 1.82
FMR1-201ENST00000218200 ZBED9Q6R2W3 1325 aa26.43■■□□□ 1.82
FMR1-201ENST00000218200 GOLGA2Q08379 1002 aa26.43■■□□□ 1.82
FMR1-201ENST00000218200 PAK3O75914 559 aaPredicted RBP26.42■■□□□ 1.82
FMR1-201ENST00000218200 ITPRIPQ8IWB1 547 aa26.42■■□□□ 1.82
FMR1-201ENST00000218200 SRPK2P78362 688 aaKnown RBP26.41■■□□□ 1.82
FMR1-201ENST00000218200 CASC1Q6TDU7 716 aa26.41■■□□□ 1.82
FMR1-201ENST00000218200 MSNP26038 577 aaKnown RBP26.39■■□□□ 1.82
FMR1-201ENST00000218200 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
FMR1-201ENST00000218200 MAGI1Q96QZ7 1491 aaPredicted RBP26.38■■□□□ 1.81
FMR1-201ENST00000218200 RRP1P56182 461 aaKnown RBP26.38■■□□□ 1.81
FMR1-201ENST00000218200 PANK3Q9H999 370 aa26.37■■□□□ 1.81
FMR1-201ENST00000218200 MYBBP1AQ9BQG0 1328 aaKnown RBP26.37■■□□□ 1.81
FMR1-201ENST00000218200 CAMSAP2Q08AD1 1489 aa26.36■■□□□ 1.81
FMR1-201ENST00000218200 AKNAQ7Z591 1439 aa26.35■■□□□ 1.81
FMR1-201ENST00000218200 GSE1Q14687 1217 aa26.35■■□□□ 1.81
FMR1-201ENST00000218200 NCOA1Q15788 1441 aa26.35■■□□□ 1.81
FMR1-201ENST00000218200 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
FMR1-201ENST00000218200 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
FMR1-201ENST00000218200 AFAP1Q8N556 730 aa26.32■■□□□ 1.8
FMR1-201ENST00000218200 GOLGA6L3A6NEY3 463 aa26.32■■□□□ 1.8
FMR1-201ENST00000218200 NUTM2DQ5VT03 806 aaPredicted RBP26.31■■□□□ 1.8
FMR1-201ENST00000218200 COG6Q9Y2V7 657 aa26.31■■□□□ 1.8
FMR1-201ENST00000218200 NUP153P49790 1475 aaKnown RBP26.31■■□□□ 1.8
FMR1-201ENST00000218200 ARHGAP5Q13017 1502 aa26.31■■□□□ 1.8
FMR1-201ENST00000218200 IL27Q8NEV9 243 aa26.3■■□□□ 1.8
FMR1-201ENST00000218200 RWDD1Q9H446 243 aaPredicted RBP26.3■■□□□ 1.8
FMR1-201ENST00000218200 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
FMR1-201ENST00000218200 FOXD4L5Q5VV16 416 aaPredicted RBP26.29■■□□□ 1.8
FMR1-201ENST00000218200 FOXD4L4Q8WXT5 416 aaPredicted RBP26.29■■□□□ 1.8
FMR1-201ENST00000218200 KCNJ4P48050 445 aa26.29■■□□□ 1.8
FMR1-201ENST00000218200 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
FMR1-201ENST00000218200 NOL8Q76FK4 1167 aaKnown RBP26.29■■□□□ 1.8
FMR1-201ENST00000218200 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
FMR1-201ENST00000218200 MS4A1P11836 297 aa26.28■■□□□ 1.8
FMR1-201ENST00000218200 NAP1L2Q9ULW6 460 aaPredicted RBP26.28■■□□□ 1.8
FMR1-201ENST00000218200 SMC4Q9NTJ3 1288 aa26.28■■□□□ 1.8
FMR1-201ENST00000218200 OS9Q13438 667 aaPredicted RBP26.27■■□□□ 1.8
FMR1-201ENST00000218200 ANO8Q9HCE9 1232 aaPredicted RBP26.27■■□□□ 1.8
FMR1-201ENST00000218200 ELL2O00472 640 aaPredicted RBP26.26■■□□□ 1.79
FMR1-201ENST00000218200 ZRSR1Q15695 479 aaKnown RBP26.25■■□□□ 1.79
FMR1-201ENST00000218200 APAF1O14727 1248 aa26.25■■□□□ 1.79
FMR1-201ENST00000218200 RPRD2Q5VT52 1461 aaKnown RBP26.24■■□□□ 1.79
FMR1-201ENST00000218200 GPATCH8Q9UKJ3 1502 aaKnown RBP26.24■■□□□ 1.79
FMR1-201ENST00000218200 CDCA7LQ96GN5 454 aa26.23■■□□□ 1.79
FMR1-201ENST00000218200 FGD1P98174 961 aa26.23■■□□□ 1.79
FMR1-201ENST00000218200 CENPJQ9HC77 1338 aaPredicted RBP26.23■■□□□ 1.79
FMR1-201ENST00000218200 SAMD9Q5K651 1589 aa26.23■■□□□ 1.79
FMR1-201ENST00000218200 PDE3BQ13370 1112 aa26.23■■□□□ 1.79
FMR1-201ENST00000218200 FAM161AQ3B820 660 aa26.23■■□□□ 1.79
FMR1-201ENST00000218200 TCOF1Q13428 1488 aaKnown RBP26.22■■□□□ 1.79
FMR1-201ENST00000218200 FOXD4L6Q3SYB3 417 aaPredicted RBP26.21■■□□□ 1.79
FMR1-201ENST00000218200 FOXD4L3Q6VB84 417 aaPredicted RBP26.21■■□□□ 1.79
FMR1-201ENST00000218200 WDR62O43379 1518 aa26.21■■□□□ 1.79
FMR1-201ENST00000218200 GBP4Q96PP9 640 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms