RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
MARK3-201ENST00000216288 ANP32AP39687 249 aaKnown RBP16.34■□□□□ 0.21
MARK3-201ENST00000216288 PTPRGP23470 1445 aa16.34■□□□□ 0.21
MARK3-201ENST00000216288 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
MARK3-201ENST00000216288 RALBP1Q15311 655 aa16.33■□□□□ 0.21
MARK3-201ENST00000216288 NLRP13Q86W25 1043 aa16.33■□□□□ 0.21
MARK3-201ENST00000216288 ADGRL2O95490 1459 aa16.33■□□□□ 0.2
MARK3-201ENST00000216288 CCDC144AA2RUR9 1427 aa16.33■□□□□ 0.2
MARK3-201ENST00000216288 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
MARK3-201ENST00000216288 RALGAPBQ86X10 1494 aa16.33■□□□□ 0.2
MARK3-201ENST00000216288 MYT1LQ9UL68 1186 aa16.32■□□□□ 0.2
MARK3-201ENST00000216288 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
MARK3-201ENST00000216288 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
MARK3-201ENST00000216288 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
MARK3-201ENST00000216288 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
MARK3-201ENST00000216288 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
MARK3-201ENST00000216288 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
MARK3-201ENST00000216288 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
MARK3-201ENST00000216288 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
MARK3-201ENST00000216288 TESK2Q96S53 571 aa16.29■□□□□ 0.2
MARK3-201ENST00000216288 ADAMTS8Q9UP79 889 aa16.29■□□□□ 0.2
MARK3-201ENST00000216288 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
MARK3-201ENST00000216288 CDC42BPAQ5VT25 1732 aa16.28■□□□□ 0.2
MARK3-201ENST00000216288 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
MARK3-201ENST00000216288 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
MARK3-201ENST00000216288 IPO9Q96P70 1041 aaKnown RBP16.28■□□□□ 0.2
MARK3-201ENST00000216288 CRBNQ96SW2 442 aa16.28■□□□□ 0.2
MARK3-201ENST00000216288 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.2
MARK3-201ENST00000216288 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
MARK3-201ENST00000216288 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
MARK3-201ENST00000216288 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.19
MARK3-201ENST00000216288 NUP160Q12769 1436 aa16.26■□□□□ 0.19
MARK3-201ENST00000216288 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
MARK3-201ENST00000216288 AFAP1Q8N556 730 aa16.25■□□□□ 0.19
MARK3-201ENST00000216288 PRAG1Q86YV5 1406 aa16.24■□□□□ 0.19
MARK3-201ENST00000216288 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
MARK3-201ENST00000216288 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
MARK3-201ENST00000216288 PDE4AP27815 886 aa16.23■□□□□ 0.19
MARK3-201ENST00000216288 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
MARK3-201ENST00000216288 CROCC2H7BZ55 1655 aa16.23■□□□□ 0.19
MARK3-201ENST00000216288 TMF1P82094 1093 aa16.23■□□□□ 0.19
MARK3-201ENST00000216288 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
MARK3-201ENST00000216288 ARHGAP5Q13017 1502 aa16.22■□□□□ 0.19
MARK3-201ENST00000216288 PARD3Q8TEW0 1356 aa16.21■□□□□ 0.19
MARK3-201ENST00000216288 ABCA8O94911 1581 aa16.21■□□□□ 0.19
MARK3-201ENST00000216288 A2MP01023 1474 aa16.21■□□□□ 0.19
MARK3-201ENST00000216288 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
MARK3-201ENST00000216288 TNNT2P45379 298 aaPredicted RBP16.19■□□□□ 0.18
MARK3-201ENST00000216288 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
MARK3-201ENST00000216288 SAMD9LQ8IVG5 1584 aa16.19■□□□□ 0.18
MARK3-201ENST00000216288 RTL5Q5HYW3 569 aaPredicted RBP16.18■□□□□ 0.18
MARK3-201ENST00000216288 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
MARK3-201ENST00000216288 ADCY10Q96PN6 1610 aa16.17■□□□□ 0.18
MARK3-201ENST00000216288 KDM5DQ9BY66 1539 aa16.17■□□□□ 0.18
MARK3-201ENST00000216288 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
MARK3-201ENST00000216288 ARHGEF12Q9NZN5 1544 aa16.16■□□□□ 0.18
MARK3-201ENST00000216288 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
MARK3-201ENST00000216288 RGS3P49796 1198 aa16.15■□□□□ 0.18
MARK3-201ENST00000216288 CHGAP10645 457 aaKnown RBP16.15■□□□□ 0.18
MARK3-201ENST00000216288 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
MARK3-201ENST00000216288 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
MARK3-201ENST00000216288 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
MARK3-201ENST00000216288 ERCC6L2Q5T890 1561 aa16.14■□□□□ 0.17
MARK3-201ENST00000216288 BACH2Q9BYV9 841 aa16.13■□□□□ 0.17
MARK3-201ENST00000216288 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
MARK3-201ENST00000216288 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
MARK3-201ENST00000216288 NEFMP07197 916 aa16.12■□□□□ 0.17
MARK3-201ENST00000216288 RTN4Q9NQC3 1192 aaKnown RBP16.12■□□□□ 0.17
MARK3-201ENST00000216288 CDC42BPBQ9Y5S2 1711 aa16.12■□□□□ 0.17
MARK3-201ENST00000216288 TTC37Q6PGP7 1564 aa16.12■□□□□ 0.17
MARK3-201ENST00000216288 APAF1O14727 1248 aa16.12■□□□□ 0.17
MARK3-201ENST00000216288 CFAP70Q5T0N1 1121 aa16.12■□□□□ 0.17
MARK3-201ENST00000216288 RSPH4AQ5TD94 716 aa16.12■□□□□ 0.17
MARK3-201ENST00000216288 PDE3BQ13370 1112 aa16.11■□□□□ 0.17
MARK3-201ENST00000216288 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
MARK3-201ENST00000216288 KIF3BO15066 747 aa16.1■□□□□ 0.17
MARK3-201ENST00000216288 NUTM2DQ5VT03 806 aaPredicted RBP16.1■□□□□ 0.17
MARK3-201ENST00000216288 BCAR3O75815 825 aa16.1■□□□□ 0.17
MARK3-201ENST00000216288 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
MARK3-201ENST00000216288 TRAPPC8Q9Y2L5 1435 aa16.1■□□□□ 0.17
MARK3-201ENST00000216288 EFCAB2Q5VUJ9 269 aa16.09■□□□□ 0.17
MARK3-201ENST00000216288 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
MARK3-201ENST00000216288 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
MARK3-201ENST00000216288 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.17
MARK3-201ENST00000216288 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.17
MARK3-201ENST00000216288 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
MARK3-201ENST00000216288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.08■□□□□ 0.16
MARK3-201ENST00000216288 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
MARK3-201ENST00000216288 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
MARK3-201ENST00000216288 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
MARK3-201ENST00000216288 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
MARK3-201ENST00000216288 ADGRF5Q8IZF2 1346 aa16.03■□□□□ 0.16
MARK3-201ENST00000216288 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
MARK3-201ENST00000216288 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
MARK3-201ENST00000216288 E9PCH4 1651 aa16.02■□□□□ 0.15
MARK3-201ENST00000216288 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.15
MARK3-201ENST00000216288 SAFB2Q14151 953 aaKnown RBP eCLIP16.01■□□□□ 0.15
MARK3-201ENST00000216288 FRAT1Q92837 279 aaPredicted RBP16.01■□□□□ 0.15
MARK3-201ENST00000216288 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
MARK3-201ENST00000216288 TMEM132EQ6IEE7 984 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms