RNA–Protein interactions for RNA: ENST00000216271.9

HDAC10-201, Transcript of histone deacetylase 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC10, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-201ENST00000216271 SAMD9LQ8IVG5 1584 aa24.07■■□□□ 1.44
HDAC10-201ENST00000216271 CDCA7LQ96GN5 454 aa24.06■■□□□ 1.44
HDAC10-201ENST00000216271 BCL11AQ9H165 835 aa24.06■■□□□ 1.44
HDAC10-201ENST00000216271 CDC42BPBQ9Y5S2 1711 aa24.04■■□□□ 1.44
HDAC10-201ENST00000216271 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
HDAC10-201ENST00000216271 FAM135AQ9P2D6 1515 aa24.04■■□□□ 1.44
HDAC10-201ENST00000216271 SKAP1Q86WV1 359 aa24.04■■□□□ 1.44
HDAC10-201ENST00000216271 PTPRGP23470 1445 aa24.04■■□□□ 1.44
HDAC10-201ENST00000216271 EXOC6Q8TAG9 804 aa24.02■■□□□ 1.44
HDAC10-201ENST00000216271 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
HDAC10-201ENST00000216271 MYBBP1AQ9BQG0 1328 aaKnown RBP24.02■■□□□ 1.44
HDAC10-201ENST00000216271 PLA2R1Q13018 1463 aa24.02■■□□□ 1.44
HDAC10-201ENST00000216271 KDM5DQ9BY66 1539 aa24.01■■□□□ 1.43
HDAC10-201ENST00000216271 DISP3Q9P2K9 1392 aa24■■□□□ 1.43
HDAC10-201ENST00000216271 SYCP2Q9BX26 1530 aa24■■□□□ 1.43
HDAC10-201ENST00000216271 LRPPRCP42704 1394 aaKnown RBP23.99■■□□□ 1.43
HDAC10-201ENST00000216271 PLIN1O60240 522 aa23.98■■□□□ 1.43
HDAC10-201ENST00000216271 NBR1Q14596 966 aa23.98■■□□□ 1.43
HDAC10-201ENST00000216271 ARID4BQ4LE39 1312 aaPredicted RBP23.98■■□□□ 1.43
HDAC10-201ENST00000216271 ARHGEF12Q9NZN5 1544 aa23.98■■□□□ 1.43
HDAC10-201ENST00000216271 PRAG1Q86YV5 1406 aa23.97■■□□□ 1.43
HDAC10-201ENST00000216271 CCDC144AA2RUR9 1427 aa23.97■■□□□ 1.43
HDAC10-201ENST00000216271 PER1O15534 1290 aaPredicted RBP23.97■■□□□ 1.43
HDAC10-201ENST00000216271 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
HDAC10-201ENST00000216271 PLEKHH2Q8IVE3 1493 aa23.96■■□□□ 1.43
HDAC10-201ENST00000216271 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
HDAC10-201ENST00000216271 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
HDAC10-201ENST00000216271 A2MP01023 1474 aa23.95■■□□□ 1.42
HDAC10-201ENST00000216271 E9PCH4 1651 aa23.94■■□□□ 1.42
HDAC10-201ENST00000216271 TESK2Q96S53 571 aa23.93■■□□□ 1.42
HDAC10-201ENST00000216271 PANK3Q9H999 370 aa23.93■■□□□ 1.42
HDAC10-201ENST00000216271 TRPM1Q7Z4N2 1603 aa23.93■■□□□ 1.42
HDAC10-201ENST00000216271 BRD4O60885 1362 aaPredicted RBP23.92■■□□□ 1.42
HDAC10-201ENST00000216271 RRP1P56182 461 aaKnown RBP23.92■■□□□ 1.42
HDAC10-201ENST00000216271 ARHGAP5Q13017 1502 aa23.91■■□□□ 1.42
HDAC10-201ENST00000216271 RALBP1Q15311 655 aa23.91■■□□□ 1.42
HDAC10-201ENST00000216271 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
HDAC10-201ENST00000216271 PREX2Q70Z35 1606 aa23.89■■□□□ 1.42
HDAC10-201ENST00000216271 RCAN3Q9UKA8 241 aa23.89■■□□□ 1.41
HDAC10-201ENST00000216271 KTN1Q86UP2 1357 aaKnown RBP23.88■■□□□ 1.41
HDAC10-201ENST00000216271 PARD3Q8TEW0 1356 aa23.88■■□□□ 1.41
HDAC10-201ENST00000216271 NPM2Q86SE8 214 aaKnown RBP23.87■■□□□ 1.41
HDAC10-201ENST00000216271 NLRP13Q86W25 1043 aa23.87■■□□□ 1.41
HDAC10-201ENST00000216271 NOP58Q9Y2X3 529 aaKnown RBP23.87■■□□□ 1.41
HDAC10-201ENST00000216271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.87■■□□□ 1.411e-6■□□□□ 10.3
HDAC10-201ENST00000216271 MYO5CQ9NQX4 1742 aa23.82■■□□□ 1.4
HDAC10-201ENST00000216271 CHD1O14646 1710 aa23.8■■□□□ 1.4
HDAC10-201ENST00000216271 C20orf194Q5TEA3 1177 aa23.8■■□□□ 1.4
HDAC10-201ENST00000216271 COL17A1Q9UMD9 1497 aaPredicted RBP23.79■■□□□ 1.4
HDAC10-201ENST00000216271 ERBINQ96RT1 1412 aa23.78■■□□□ 1.4
HDAC10-201ENST00000216271 ADAMTS8Q9UP79 889 aa23.77■■□□□ 1.39
HDAC10-201ENST00000216271 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
HDAC10-201ENST00000216271 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
HDAC10-201ENST00000216271 CRBNQ96SW2 442 aa23.75■■□□□ 1.39
HDAC10-201ENST00000216271 UNC13BO14795 1591 aa23.75■■□□□ 1.39
HDAC10-201ENST00000216271 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
HDAC10-201ENST00000216271 TRAPPC8Q9Y2L5 1435 aa23.74■■□□□ 1.39
HDAC10-201ENST00000216271 DEKP35659 375 aaKnown RBP23.74■■□□□ 1.39
HDAC10-201ENST00000216271 IPO9Q96P70 1041 aaKnown RBP23.72■■□□□ 1.39
HDAC10-201ENST00000216271 MAGI2Q86UL8 1455 aa23.72■■□□□ 1.39
HDAC10-201ENST00000216271 TMF1P82094 1093 aa23.71■■□□□ 1.39
HDAC10-201ENST00000216271 RSPH4AQ5TD94 716 aa23.71■■□□□ 1.39
HDAC10-201ENST00000216271 ANP32AP39687 249 aaKnown RBP23.7■■□□□ 1.39
HDAC10-201ENST00000216271 IQGAP3Q86VI3 1631 aa23.68■■□□□ 1.38
HDAC10-201ENST00000216271 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
HDAC10-201ENST00000216271 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
HDAC10-201ENST00000216271 PDE4AP27815 886 aa23.66■■□□□ 1.38
HDAC10-201ENST00000216271 ZBTB47Q9UFB7 747 aaPredicted RBP23.65■■□□□ 1.38
HDAC10-201ENST00000216271 PPP2R1AP30153 589 aa23.64■■□□□ 1.38
HDAC10-201ENST00000216271 MAST1Q9Y2H9 1570 aa23.64■■□□□ 1.37
HDAC10-201ENST00000216271 LAS1LQ9Y4W2 734 aaKnown RBP23.63■■□□□ 1.37
HDAC10-201ENST00000216271 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
HDAC10-201ENST00000216271 WDR7Q9Y4E6 1490 aa23.63■■□□□ 1.37
HDAC10-201ENST00000216271 ABCC2Q92887 1545 aa23.61■■□□□ 1.37
HDAC10-201ENST00000216271 DUOX2Q9NRD8 1548 aa23.6■■□□□ 1.37
HDAC10-201ENST00000216271 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
HDAC10-201ENST00000216271 SPINK5Q9NQ38 1064 aaPredicted RBP23.6■■□□□ 1.37
HDAC10-201ENST00000216271 PLXNC1O60486 1568 aa23.6■■□□□ 1.37
HDAC10-201ENST00000216271 PDE3BQ13370 1112 aa23.59■■□□□ 1.37
HDAC10-201ENST00000216271 MYT1LQ9UL68 1186 aa23.59■■□□□ 1.37
HDAC10-201ENST00000216271 KNSTRNQ9Y448 316 aa23.59■■□□□ 1.37
HDAC10-201ENST00000216271 EFCAB2Q5VUJ9 269 aa23.59■■□□□ 1.37
HDAC10-201ENST00000216271 PLCH2O75038 1416 aa23.57■■□□□ 1.36
HDAC10-201ENST00000216271 BACH2Q9BYV9 841 aa23.57■■□□□ 1.36
HDAC10-201ENST00000216271 UGGT1Q9NYU2 1555 aa23.56■■□□□ 1.36
HDAC10-201ENST00000216271 SPAG9O60271 1321 aaKnown RBP23.56■■□□□ 1.36
HDAC10-201ENST00000216271 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
HDAC10-201ENST00000216271 DMRT2Q9Y5R5 561 aa23.56■■□□□ 1.36
HDAC10-201ENST00000216271 ATP10AO60312 1499 aa23.55■■□□□ 1.36
HDAC10-201ENST00000216271 ZCCHC11Q5TAX3 1644 aaKnown RBP23.55■■□□□ 1.36
HDAC10-201ENST00000216271 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
HDAC10-201ENST00000216271 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
HDAC10-201ENST00000216271 SENP3Q9H4L4 574 aaPredicted RBP23.55■■□□□ 1.36
HDAC10-201ENST00000216271 MADDQ8WXG6 1647 aa23.54■■□□□ 1.36
HDAC10-201ENST00000216271 RNF17Q9BXT8 1623 aaKnown RBP23.54■■□□□ 1.36
HDAC10-201ENST00000216271 SLC4A3P48751 1232 aa23.54■■□□□ 1.36
HDAC10-201ENST00000216271 TCERG1O14776 1098 aaKnown RBP23.53■■□□□ 1.36
HDAC10-201ENST00000216271 WDR43Q15061 677 aaKnown RBP eCLIP23.53■■□□□ 1.36
HDAC10-201ENST00000216271 ZMYM4Q5VZL5 1548 aa23.53■■□□□ 1.36
HDAC10-201ENST00000216271 LAMC1P11047 1609 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms