RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DEPDC5O75140 1603 aa28.36■■■□□ 2.13
TNFRSF1A-201ENST00000162749 MYT1LQ9UL68 1186 aa28.35■■■□□ 2.13
TNFRSF1A-201ENST00000162749 MLH3Q9UHC1 1453 aa28.35■■■□□ 2.13
TNFRSF1A-201ENST00000162749 EIF2AK4Q9P2K8 1649 aaKnown RBP28.34■■■□□ 2.13
TNFRSF1A-201ENST00000162749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.33■■■□□ 2.12
TNFRSF1A-201ENST00000162749 DHX29Q7Z478 1369 aaKnown RBP28.31■■■□□ 2.12
TNFRSF1A-201ENST00000162749 RAPGEF3O95398 923 aa28.29■■■□□ 2.12
TNFRSF1A-201ENST00000162749 ABCA6Q8N139 1617 aa28.29■■■□□ 2.12
TNFRSF1A-201ENST00000162749 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
TNFRSF1A-201ENST00000162749 DIEXFQ68CQ4 756 aaKnown RBP28.27■■■□□ 2.12
TNFRSF1A-201ENST00000162749 FRMPD1Q5SYB0 1578 aa28.26■■■□□ 2.11
TNFRSF1A-201ENST00000162749 A2MP01023 1474 aa28.25■■■□□ 2.11
TNFRSF1A-201ENST00000162749 MROH1Q8NDA8 1641 aa28.24■■■□□ 2.11
TNFRSF1A-201ENST00000162749 PRDM15P57071 1507 aaPredicted RBP28.23■■■□□ 2.11
TNFRSF1A-201ENST00000162749 L3MBTL2Q969R5 705 aa28.23■■■□□ 2.11
TNFRSF1A-201ENST00000162749 VWDEQ8N2E2 1590 aa28.22■■■□□ 2.11
TNFRSF1A-201ENST00000162749 KIF3BO15066 747 aa28.21■■■□□ 2.11
TNFRSF1A-201ENST00000162749 DIP2CQ9Y2E4 1556 aa28.19■■■□□ 2.1
TNFRSF1A-201ENST00000162749 E9PCH4 1651 aa28.19■■■□□ 2.1
TNFRSF1A-201ENST00000162749 BCORL1Q5H9F3 1711 aa28.18■■■□□ 2.1
TNFRSF1A-201ENST00000162749 RNF17Q9BXT8 1623 aaKnown RBP28.18■■■□□ 2.1
TNFRSF1A-201ENST00000162749 TET3O43151 1660 aa28.18■■■□□ 2.1
TNFRSF1A-201ENST00000162749 ZMYM4Q5VZL5 1548 aa28.17■■■□□ 2.1
TNFRSF1A-201ENST00000162749 PLA2R1Q13018 1463 aa28.16■■■□□ 2.1
TNFRSF1A-201ENST00000162749 KANK1Q14678 1352 aa28.14■■■□□ 2.09
TNFRSF1A-201ENST00000162749 ATP10AO60312 1499 aa28.14■■■□□ 2.09
TNFRSF1A-201ENST00000162749 YEATS2Q9ULM3 1422 aa28.12■■■□□ 2.09
TNFRSF1A-201ENST00000162749 CCDC144AA2RUR9 1427 aa28.11■■■□□ 2.09
TNFRSF1A-201ENST00000162749 CEP152O94986 1710 aa28.09■■■□□ 2.09
TNFRSF1A-201ENST00000162749 SPHKAPQ2M3C7 1700 aa28.09■■■□□ 2.09
TNFRSF1A-201ENST00000162749 LMTK2Q8IWU2 1503 aa28.04■■■□□ 2.08
TNFRSF1A-201ENST00000162749 EFCAB6Q5THR3 1501 aa28.04■■■□□ 2.08
TNFRSF1A-201ENST00000162749 TRPM2O94759 1503 aa28.02■■■□□ 2.08
TNFRSF1A-201ENST00000162749 NBPF8Q3BBV2 869 aa28.02■■■□□ 2.08
TNFRSF1A-201ENST00000162749 COL17A1Q9UMD9 1497 aaPredicted RBP28.02■■■□□ 2.08
TNFRSF1A-201ENST00000162749 PTPRTO14522 1441 aa28■■■□□ 2.07
TNFRSF1A-201ENST00000162749 GGT6Q6P531 493 aa27.98■■■□□ 2.07
TNFRSF1A-201ENST00000162749 CFAP65Q6ZU64 1925 aaKnown RBP27.95■■■□□ 2.07
TNFRSF1A-201ENST00000162749 CLTCL1P53675 1640 aa27.95■■■□□ 2.06
TNFRSF1A-201ENST00000162749 ABCC3O15438 1527 aa27.95■■■□□ 2.06
TNFRSF1A-201ENST00000162749 REREQ9P2R6 1566 aa27.94■■■□□ 2.06
TNFRSF1A-201ENST00000162749 UHRF1BP1Q6BDS2 1440 aa27.94■■■□□ 2.06
TNFRSF1A-201ENST00000162749 HIRIP3Q9BW71 556 aaPredicted RBP27.93■■■□□ 2.06
TNFRSF1A-201ENST00000162749 CAMSAP1Q5T5Y3 1602 aa27.92■■■□□ 2.06
TNFRSF1A-201ENST00000162749 ZC3H13Q5T200 1668 aaKnown RBP27.91■■■□□ 2.06
TNFRSF1A-201ENST00000162749 DCAF11Q8TEB1 546 aa27.9■■■□□ 2.06
TNFRSF1A-201ENST00000162749 ARHGEF40Q8TER5 1519 aa27.89■■■□□ 2.06
TNFRSF1A-201ENST00000162749 SPATA31E1Q6ZUB1 1445 aa27.89■■■□□ 2.05
TNFRSF1A-201ENST00000162749 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
TNFRSF1A-201ENST00000162749 SIGLEC1Q9BZZ2 1709 aa27.88■■■□□ 2.05
TNFRSF1A-201ENST00000162749 NPATQ14207 1427 aa27.88■■■□□ 2.05
TNFRSF1A-201ENST00000162749 ZNF326Q5BKZ1 582 aaKnown RBP27.88■■■□□ 2.05
TNFRSF1A-201ENST00000162749 RGL3Q3MIN7 710 aa27.87■■■□□ 2.05
TNFRSF1A-201ENST00000162749 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
TNFRSF1A-201ENST00000162749 AGLP35573 1532 aa27.85■■■□□ 2.05
TNFRSF1A-201ENST00000162749 KDM2AQ9Y2K7 1162 aa27.85■■■□□ 2.05
TNFRSF1A-201ENST00000162749 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
TNFRSF1A-201ENST00000162749 UGGT1Q9NYU2 1555 aa27.84■■■□□ 2.05
TNFRSF1A-201ENST00000162749 KIF1BO60333 1816 aa27.84■■■□□ 2.05
TNFRSF1A-201ENST00000162749 EIF4G2P78344 907 aaKnown RBP eCLIP27.83■■■□□ 2.05
TNFRSF1A-201ENST00000162749 HSPA5P11021 654 aaKnown RBP27.82■■■□□ 2.04
TNFRSF1A-201ENST00000162749 NEURL4Q96JN8 1562 aa27.81■■■□□ 2.04
TNFRSF1A-201ENST00000162749 PRAG1Q86YV5 1406 aa27.8■■■□□ 2.04
TNFRSF1A-201ENST00000162749 TRPM1Q7Z4N2 1603 aa27.8■■■□□ 2.04
TNFRSF1A-201ENST00000162749 ARHGAP31Q2M1Z3 1444 aa27.77■■■□□ 2.04
TNFRSF1A-201ENST00000162749 SCAF1Q9H7N4 1312 aaKnown RBP27.76■■■□□ 2.04
TNFRSF1A-201ENST00000162749 CNTLNQ9NXG0 1405 aa27.76■■■□□ 2.03
TNFRSF1A-201ENST00000162749 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
TNFRSF1A-201ENST00000162749 MIER1Q8N108 512 aa27.75■■■□□ 2.03
TNFRSF1A-201ENST00000162749 MROH2AA6NES4 1674 aa27.75■■■□□ 2.03
TNFRSF1A-201ENST00000162749 NOS1P29475 1434 aa27.73■■■□□ 2.03
TNFRSF1A-201ENST00000162749 SYNMO15061 1565 aa27.71■■■□□ 2.03
TNFRSF1A-201ENST00000162749 POLR1AO95602 1720 aaPredicted RBP27.7■■■□□ 2.03
TNFRSF1A-201ENST00000162749 PIK3C2BO00750 1634 aa27.7■■■□□ 2.02
TNFRSF1A-201ENST00000162749 MADDQ8WXG6 1647 aa27.7■■■□□ 2.02
TNFRSF1A-201ENST00000162749 USP47Q96K76 1375 aa27.7■■■□□ 2.02
TNFRSF1A-201ENST00000162749 PREX1Q8TCU6 1659 aa27.7■■■□□ 2.02
TNFRSF1A-201ENST00000162749 IFT172Q9UG01 1749 aa27.7■■■□□ 2.02
TNFRSF1A-201ENST00000162749 CLTCQ00610 1675 aaKnown RBP27.69■■■□□ 2.02
TNFRSF1A-201ENST00000162749 ADGRB3O60242 1522 aa27.69■■■□□ 2.02
TNFRSF1A-201ENST00000162749 DDX10Q13206 875 aaKnown RBP27.68■■■□□ 2.02
TNFRSF1A-201ENST00000162749 ROCK2O75116 1388 aaKnown RBP27.67■■■□□ 2.02
TNFRSF1A-201ENST00000162749 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
TNFRSF1A-201ENST00000162749 PPP6R1Q9UPN7 881 aa27.66■■■□□ 2.02
TNFRSF1A-201ENST00000162749 LAMC1P11047 1609 aa27.64■■■□□ 2.02
TNFRSF1A-201ENST00000162749 STAC3Q96MF2 364 aa27.64■■■□□ 2.01
TNFRSF1A-201ENST00000162749 WASHC2AQ641Q2 1341 aa27.64■■■□□ 2.01
TNFRSF1A-201ENST00000162749 GPRASP1Q5JY77 1395 aa27.63■■■□□ 2.01
TNFRSF1A-201ENST00000162749 CENPBP07199 599 aaPredicted RBP27.6■■■□□ 2.01
TNFRSF1A-201ENST00000162749 NBPF1Q3BBV0 1214 aa27.6■■■□□ 2.01
TNFRSF1A-201ENST00000162749 PPLO60437 1756 aa27.6■■■□□ 2.01
TNFRSF1A-201ENST00000162749 MLECQ14165 292 aa27.6■■■□□ 2.01
TNFRSF1A-201ENST00000162749 MYOM2P54296 1465 aa27.6■■■□□ 2.01
TNFRSF1A-201ENST00000162749 C11orf95C9JLR9 678 aaPredicted RBP27.59■■■□□ 2.01
TNFRSF1A-201ENST00000162749 KIAA1210Q9ULL0 1709 aa27.56■■■□□ 2
TNFRSF1A-201ENST00000162749 ERVK-7P63135 1459 aa27.56■■■□□ 2
TNFRSF1A-201ENST00000162749 MYO5BQ9ULV0 1848 aa27.56■■■□□ 2
TNFRSF1A-201ENST00000162749 CCDC7Q96M83 1385 aa27.55■■■□□ 2
TNFRSF1A-201ENST00000162749 CHGAP10645 457 aaKnown RBP27.55■■■□□ 2
TNFRSF1A-201ENST00000162749 FBXO31Q5XUX0 539 aaPredicted RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms