RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 EXOC6Q8TAG9 804 aa11.1□□□□□ -0.63
CDC27-201ENST00000066544 NBR1Q14596 966 aa11.1□□□□□ -0.63
CDC27-201ENST00000066544 PANK3Q9H999 370 aa11.1□□□□□ -0.63
CDC27-201ENST00000066544 RALBP1Q15311 655 aa11.1□□□□□ -0.63
CDC27-201ENST00000066544 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
CDC27-201ENST00000066544 PLIN1O60240 522 aa11.09□□□□□ -0.63
CDC27-201ENST00000066544 NLRP13Q86W25 1043 aa11.09□□□□□ -0.63
CDC27-201ENST00000066544 ABCA8O94911 1581 aa11.09□□□□□ -0.63
CDC27-201ENST00000066544 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
CDC27-201ENST00000066544 UHRF1BP1Q6BDS2 1440 aa11.08□□□□□ -0.64
CDC27-201ENST00000066544 CCDC141Q6ZP82 1450 aa11.08□□□□□ -0.64
CDC27-201ENST00000066544 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
CDC27-201ENST00000066544 PLEKHH2Q8IVE3 1493 aa11.07□□□□□ -0.64
CDC27-201ENST00000066544 ARHGAP5Q13017 1502 aa11.07□□□□□ -0.64
CDC27-201ENST00000066544 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
CDC27-201ENST00000066544 CROCC2H7BZ55 1655 aa11.06□□□□□ -0.64
CDC27-201ENST00000066544 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
CDC27-201ENST00000066544 SKAP1Q86WV1 359 aa11.06□□□□□ -0.64
CDC27-201ENST00000066544 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
CDC27-201ENST00000066544 ADCY10Q96PN6 1610 aa11.06□□□□□ -0.64
CDC27-201ENST00000066544 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
CDC27-201ENST00000066544 DISP3Q9P2K9 1392 aa11.06□□□□□ -0.64
CDC27-201ENST00000066544 RRP1P56182 461 aaKnown RBP11.05□□□□□ -0.64
CDC27-201ENST00000066544 AFAP1Q8N556 730 aa11.05□□□□□ -0.64
CDC27-201ENST00000066544 SHANK2Q9UPX8 1470 aa11.05□□□□□ -0.64
CDC27-201ENST00000066544 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
CDC27-201ENST00000066544 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
CDC27-201ENST00000066544 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
CDC27-201ENST00000066544 TMF1P82094 1093 aa11.04□□□□□ -0.64
CDC27-201ENST00000066544 TESK2Q96S53 571 aa11.04□□□□□ -0.64
CDC27-201ENST00000066544 SAMD9LQ8IVG5 1584 aa11.03□□□□□ -0.64
CDC27-201ENST00000066544 PLA2R1Q13018 1463 aa11.03□□□□□ -0.64
CDC27-201ENST00000066544 NOP58Q9Y2X3 529 aaKnown RBP11.03□□□□□ -0.64
CDC27-201ENST00000066544 ARHGEF12Q9NZN5 1544 aa11.03□□□□□ -0.64
CDC27-201ENST00000066544 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
CDC27-201ENST00000066544 POLR1AO95602 1720 aaPredicted RBP11.03□□□□□ -0.64
CDC27-201ENST00000066544 BCL11AQ9H165 835 aa11.03□□□□□ -0.64
CDC27-201ENST00000066544 RNF123Q5XPI4 1314 aa11.02□□□□□ -0.64
CDC27-201ENST00000066544 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.64
CDC27-201ENST00000066544 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.65
CDC27-201ENST00000066544 A2MP01023 1474 aa11.02□□□□□ -0.65
CDC27-201ENST00000066544 SENP3Q9H4L4 574 aaPredicted RBP11.01□□□□□ -0.65
CDC27-201ENST00000066544 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
CDC27-201ENST00000066544 ADAMTS8Q9UP79 889 aa11□□□□□ -0.65
CDC27-201ENST00000066544 ERCC6L2Q5T890 1561 aa11□□□□□ -0.65
CDC27-201ENST00000066544 PARD3Q8TEW0 1356 aa10.99□□□□□ -0.65
CDC27-201ENST00000066544 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
CDC27-201ENST00000066544 SPAG9O60271 1321 aaKnown RBP10.99□□□□□ -0.65
CDC27-201ENST00000066544 TTC37Q6PGP7 1564 aa10.99□□□□□ -0.65
CDC27-201ENST00000066544 ERBINQ96RT1 1412 aa10.99□□□□□ -0.65
CDC27-201ENST00000066544 CHGAP10645 457 aaKnown RBP10.99□□□□□ -0.65
CDC27-201ENST00000066544 CDC42BPBQ9Y5S2 1711 aa10.99□□□□□ -0.65
CDC27-201ENST00000066544 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDC27-201ENST00000066544 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
CDC27-201ENST00000066544 CRBNQ96SW2 442 aa10.98□□□□□ -0.65
CDC27-201ENST00000066544 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
CDC27-201ENST00000066544 KIF3BO15066 747 aa10.97□□□□□ -0.65
CDC27-201ENST00000066544 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
CDC27-201ENST00000066544 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
CDC27-201ENST00000066544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDC27-201ENST00000066544 TRAPPC8Q9Y2L5 1435 aa10.97□□□□□ -0.65
CDC27-201ENST00000066544 IPO9Q96P70 1041 aaKnown RBP10.95□□□□□ -0.66
CDC27-201ENST00000066544 PDE3BQ13370 1112 aa10.95□□□□□ -0.66
CDC27-201ENST00000066544 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
CDC27-201ENST00000066544 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
CDC27-201ENST00000066544 DEKP35659 375 aaKnown RBP10.94□□□□□ -0.66
CDC27-201ENST00000066544 TNNT2P45379 298 aaPredicted RBP10.94□□□□□ -0.66
CDC27-201ENST00000066544 CFAP70Q5T0N1 1121 aa10.94□□□□□ -0.66
CDC27-201ENST00000066544 LAS1LQ9Y4W2 734 aaKnown RBP10.94□□□□□ -0.66
CDC27-201ENST00000066544 COL17A1Q9UMD9 1497 aaPredicted RBP10.94□□□□□ -0.66
CDC27-201ENST00000066544 PDE4AP27815 886 aa10.94□□□□□ -0.66
CDC27-201ENST00000066544 GPRASP1Q5JY77 1395 aa10.93□□□□□ -0.66
CDC27-201ENST00000066544 TRPM1Q7Z4N2 1603 aa10.93□□□□□ -0.66
CDC27-201ENST00000066544 CHD1O14646 1710 aa10.91□□□□□ -0.66
CDC27-201ENST00000066544 NEUROD2Q15784 382 aa10.91□□□□□ -0.66
CDC27-201ENST00000066544 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
CDC27-201ENST00000066544 APAF1O14727 1248 aa10.9□□□□□ -0.66
CDC27-201ENST00000066544 TCERG1O14776 1098 aaKnown RBP10.9□□□□□ -0.66
CDC27-201ENST00000066544 PLCH2O75038 1416 aa10.9□□□□□ -0.66
CDC27-201ENST00000066544 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
CDC27-201ENST00000066544 WASHC2CQ9Y4E1 1318 aa10.9□□□□□ -0.67
CDC27-201ENST00000066544 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.67
CDC27-201ENST00000066544 MAGI2Q86UL8 1455 aa10.89□□□□□ -0.67
CDC27-201ENST00000066544 NUTM2DQ5VT03 806 aaPredicted RBP10.89□□□□□ -0.67
CDC27-201ENST00000066544 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
CDC27-201ENST00000066544 RGS3P49796 1198 aa10.89□□□□□ -0.67
CDC27-201ENST00000066544 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
CDC27-201ENST00000066544 DUOX2Q9NRD8 1548 aa10.89□□□□□ -0.67
CDC27-201ENST00000066544 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CDC27-201ENST00000066544 ADGRF5Q8IZF2 1346 aa10.88□□□□□ -0.67
CDC27-201ENST00000066544 CDCA8Q53HL2 280 aa10.88□□□□□ -0.67
CDC27-201ENST00000066544 GGT6Q6P531 493 aa10.87□□□□□ -0.67
CDC27-201ENST00000066544 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
CDC27-201ENST00000066544 TRAK1Q9UPV9 953 aa10.87□□□□□ -0.67
CDC27-201ENST00000066544 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
CDC27-201ENST00000066544 BACH2Q9BYV9 841 aa10.87□□□□□ -0.67
CDC27-201ENST00000066544 PRDM15P57071 1507 aaPredicted RBP10.87□□□□□ -0.67
CDC27-201ENST00000066544 E9PCH4 1651 aa10.87□□□□□ -0.67
CDC27-201ENST00000066544 DUSP27Q5VZP5 1158 aa10.87□□□□□ -0.67
CDC27-201ENST00000066544 UNC13BO14795 1591 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms