RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ZNF330Q9Y3S2 320 aaPredicted RBP29.09■■■□□ 2.25
TARBP1-201ENST00000040877 PANK3Q9H999 370 aa29.09■■■□□ 2.25
TARBP1-201ENST00000040877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.08■■■□□ 2.258e-8■■■■□ 26.3
TARBP1-201ENST00000040877 L1TD1Q5T7N2 865 aaKnown RBP29.08■■■□□ 2.24
TARBP1-201ENST00000040877 CYB5RLQ6IPT4 315 aa29.07■■■□□ 2.24
TARBP1-201ENST00000040877 RAD54L2Q9Y4B4 1467 aa29.06■■■□□ 2.24
TARBP1-201ENST00000040877 TMX4Q9H1E5 349 aaPredicted RBP29.06■■■□□ 2.24
TARBP1-201ENST00000040877 COG3Q96JB2 828 aa29.06■■■□□ 2.24
TARBP1-201ENST00000040877 USP47Q96K76 1375 aa29.06■■■□□ 2.24
TARBP1-201ENST00000040877 CCDC146Q8IYE0 955 aa29.05■■■□□ 2.24
TARBP1-201ENST00000040877 GBP4Q96PP9 640 aa29.05■■■□□ 2.24
TARBP1-201ENST00000040877 GORABQ5T7V8 394 aa29.04■■■□□ 2.24
TARBP1-201ENST00000040877 GNL2Q13823 731 aaKnown RBP29.04■■■□□ 2.24
TARBP1-201ENST00000040877 HTATSF1O43719 755 aaKnown RBP29.04■■■□□ 2.24
TARBP1-201ENST00000040877 FGD6Q6ZV73 1430 aa29.02■■■□□ 2.24
TARBP1-201ENST00000040877 CCDC9Q9Y3X0 531 aaKnown RBP29.02■■■□□ 2.24
TARBP1-201ENST00000040877 TULP1O00294 542 aaPredicted RBP29.02■■■□□ 2.24
TARBP1-201ENST00000040877 NGEFQ8N5V2 710 aa29.02■■■□□ 2.24
TARBP1-201ENST00000040877 TAF7LQ5H9L4 462 aa29.01■■■□□ 2.24
TARBP1-201ENST00000040877 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.99■■■□□ 2.23
TARBP1-201ENST00000040877 TSHZ2Q9NRE2 1034 aa28.99■■■□□ 2.23
TARBP1-201ENST00000040877 SLC4A10Q6U841 1118 aa28.97■■■□□ 2.23
TARBP1-201ENST00000040877 PRKRIP1Q9H875 184 aaPredicted RBP28.96■■■□□ 2.23
TARBP1-201ENST00000040877 LTV1Q96GA3 475 aaPredicted RBP28.96■■■□□ 2.23
TARBP1-201ENST00000040877 ISY1Q9ULR0 285 aaKnown RBP28.95■■■□□ 2.23
TARBP1-201ENST00000040877 CHMP3Q9Y3E7 222 aa28.95■■■□□ 2.23
TARBP1-201ENST00000040877 NUTM2FA1L443 756 aa28.95■■■□□ 2.22
TARBP1-201ENST00000040877 E9PSI1 815 aa28.95■■■□□ 2.22
TARBP1-201ENST00000040877 GRIN2BQ13224 1484 aa28.94■■■□□ 2.22
TARBP1-201ENST00000040877 CLUAP1Q96AJ1 413 aa28.94■■■□□ 2.22
TARBP1-201ENST00000040877 CASKIN1Q8WXD9 1431 aa28.92■■■□□ 2.22
TARBP1-201ENST00000040877 CHAF1AQ13111 956 aaPredicted RBP28.92■■■□□ 2.22
TARBP1-201ENST00000040877 SPRYD3Q8NCJ5 442 aa28.92■■■□□ 2.22
TARBP1-201ENST00000040877 FYCO1Q9BQS8 1478 aa28.92■■■□□ 2.22
TARBP1-201ENST00000040877 TRIM6-TRIM34B2RNG4 842 aa28.91■■■□□ 2.22
TARBP1-201ENST00000040877 C1orf141Q5JVX7 400 aa28.89■■■□□ 2.22
TARBP1-201ENST00000040877 AQRO60306 1485 aaKnown RBP eCLIP28.89■■■□□ 2.213e-14■■■□□ 15.9
TARBP1-201ENST00000040877 SYAP1Q96A49 352 aaPredicted RBP28.88■■■□□ 2.21
TARBP1-201ENST00000040877 MINK1Q8N4C8 1332 aaPredicted RBP28.88■■■□□ 2.21
TARBP1-201ENST00000040877 LRRC9Q6ZRR7 1453 aa28.87■■■□□ 2.21
TARBP1-201ENST00000040877 MFAP1P55081 439 aaKnown RBP28.86■■■□□ 2.21
TARBP1-201ENST00000040877 CCDC34Q96HJ3 373 aa28.86■■■□□ 2.21
TARBP1-201ENST00000040877 MSNP26038 577 aaKnown RBP28.85■■■□□ 2.21
TARBP1-201ENST00000040877 ANKRD50Q9ULJ7 1429 aa28.85■■■□□ 2.21
TARBP1-201ENST00000040877 KIF21BO75037 1637 aa28.85■■■□□ 2.21
TARBP1-201ENST00000040877 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
TARBP1-201ENST00000040877 FAM69CQ0P6D2 419 aa28.84■■■□□ 2.21
TARBP1-201ENST00000040877 ZBED9Q6R2W3 1325 aa28.84■■■□□ 2.21
TARBP1-201ENST00000040877 ZKSCAN2Q63HK3 967 aa28.84■■■□□ 2.21
TARBP1-201ENST00000040877 TEFQ10587 303 aa28.83■■■□□ 2.21
TARBP1-201ENST00000040877 DRC7Q8IY82 874 aa28.83■■■□□ 2.21
TARBP1-201ENST00000040877 RRP7AQ9Y3A4 280 aaKnown RBP28.82■■■□□ 2.2
TARBP1-201ENST00000040877 CFTRP13569 1480 aa28.81■■■□□ 2.2
TARBP1-201ENST00000040877 MIA2Q96PC5 1412 aa28.81■■■□□ 2.2
TARBP1-201ENST00000040877 CENPQQ7L2Z9 268 aaPredicted RBP28.81■■■□□ 2.2
TARBP1-201ENST00000040877 DIAPH1O60610 1272 aaKnown RBP28.81■■■□□ 2.2
TARBP1-201ENST00000040877 CSPP1Q1MSJ5 1256 aa28.8■■■□□ 2.2
TARBP1-201ENST00000040877 NCOA2Q15596 1464 aa28.79■■■□□ 2.2
TARBP1-201ENST00000040877 GTF2E1P29083 439 aaPredicted RBP28.79■■■□□ 2.2
TARBP1-201ENST00000040877 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
TARBP1-201ENST00000040877 KIF3AQ9Y496 699 aa28.78■■■□□ 2.2
TARBP1-201ENST00000040877 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
TARBP1-201ENST00000040877 SLKQ9H2G2 1235 aaPredicted RBP28.76■■■□□ 2.2
TARBP1-201ENST00000040877 ST18O60284 1047 aa28.76■■■□□ 2.19
TARBP1-201ENST00000040877 ZNF644Q9H582 1327 aaPredicted RBP28.76■■■□□ 2.19
TARBP1-201ENST00000040877 CHMP4CQ96CF2 233 aa28.75■■■□□ 2.19
TARBP1-201ENST00000040877 HSP90B1P14625 803 aaKnown RBP28.74■■■□□ 2.19
TARBP1-201ENST00000040877 EVA1CP58658 441 aa28.73■■■□□ 2.19
TARBP1-201ENST00000040877 NEXNQ0ZGT2 675 aa28.72■■■□□ 2.19
TARBP1-201ENST00000040877 G3V3G9 751 aa28.72■■■□□ 2.19
TARBP1-201ENST00000040877 DCAF8Q5TAQ9 597 aa28.72■■■□□ 2.19
TARBP1-201ENST00000040877 TTC5Q8N0Z6 440 aa28.72■■■□□ 2.19
TARBP1-201ENST00000040877 IPO9Q96P70 1041 aaKnown RBP28.71■■■□□ 2.19
TARBP1-201ENST00000040877 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
TARBP1-201ENST00000040877 IFT140Q96RY7 1462 aa28.7■■■□□ 2.19
TARBP1-201ENST00000040877 APAF1O14727 1248 aa28.7■■■□□ 2.19
TARBP1-201ENST00000040877 RRP1P56182 461 aaKnown RBP28.7■■■□□ 2.19
TARBP1-201ENST00000040877 TPM4P67936 248 aa28.7■■■□□ 2.19
TARBP1-201ENST00000040877 EFCAB5A4FU69 1503 aa28.7■■■□□ 2.18
TARBP1-201ENST00000040877 API5Q9BZZ5 524 aaKnown RBP28.7■■■□□ 2.18
TARBP1-201ENST00000040877 ARHGAP5Q13017 1502 aa28.69■■■□□ 2.18
TARBP1-201ENST00000040877 PSME1Q06323 249 aa28.69■■■□□ 2.18
TARBP1-201ENST00000040877 ELL2O00472 640 aaPredicted RBP28.68■■■□□ 2.18
TARBP1-201ENST00000040877 FRAT2O75474 233 aaPredicted RBP28.68■■■□□ 2.18
TARBP1-201ENST00000040877 LRRFIP1Q32MZ4 808 aaKnown RBP28.68■■■□□ 2.18
TARBP1-201ENST00000040877 DDX19BQ9UMR2 479 aa28.67■■■□□ 2.18
TARBP1-201ENST00000040877 RRBP1Q9P2E9 1410 aaKnown RBP28.67■■■□□ 2.18
TARBP1-201ENST00000040877 KIF16BQ96L93 1317 aa28.67■■■□□ 2.18
TARBP1-201ENST00000040877 CLSTN1O94985 981 aa28.67■■■□□ 2.18
TARBP1-201ENST00000040877 KIAA2012Q0VF49 1180 aa28.67■■■□□ 2.18
TARBP1-201ENST00000040877 CCDC7Q96M83 1385 aa28.67■■■□□ 2.18
TARBP1-201ENST00000040877 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.67■■■□□ 2.18
TARBP1-201ENST00000040877 ROCK1Q13464 1354 aa28.66■■■□□ 2.18
TARBP1-201ENST00000040877 RUNDC1Q96C34 613 aa28.66■■■□□ 2.18
TARBP1-201ENST00000040877 PLEKHH2Q8IVE3 1493 aa28.65■■■□□ 2.18
TARBP1-201ENST00000040877 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.18
TARBP1-201ENST00000040877 RIPK4P57078 832 aa28.63■■■□□ 2.17
TARBP1-201ENST00000040877 HMGXB3Q12766 1538 aa28.62■■■□□ 2.17
TARBP1-201ENST00000040877 DDX58O95786 925 aaKnown RBP28.62■■■□□ 2.17
TARBP1-201ENST00000040877 ANKRD45Q5TZF3 282 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms