RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 PTPRMP28827 1452 aa18.18■□□□□ 0.5
SYPL1-201ENST00000011473 FER1L4A9Z1Z3 1794 aa18.17■□□□□ 0.5
SYPL1-201ENST00000011473 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
SYPL1-201ENST00000011473 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
SYPL1-201ENST00000011473 NAIPQ13075 1403 aa18.16■□□□□ 0.5
SYPL1-201ENST00000011473 WASHC2CQ9Y4E1 1318 aa18.16■□□□□ 0.5
SYPL1-201ENST00000011473 MROH1Q8NDA8 1641 aa18.15■□□□□ 0.5
SYPL1-201ENST00000011473 RNF17Q9BXT8 1623 aaKnown RBP18.14■□□□□ 0.49
SYPL1-201ENST00000011473 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
SYPL1-201ENST00000011473 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
SYPL1-201ENST00000011473 ZMYM3Q14202 1370 aa18.12■□□□□ 0.49
SYPL1-201ENST00000011473 KDM5DQ9BY66 1539 aa18.11■□□□□ 0.49
SYPL1-201ENST00000011473 PRDM15P57071 1507 aaPredicted RBP18.1■□□□□ 0.49
SYPL1-201ENST00000011473 CNTLNQ9NXG0 1405 aa18.1■□□□□ 0.49
SYPL1-201ENST00000011473 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
SYPL1-201ENST00000011473 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
SYPL1-201ENST00000011473 ABCC3O15438 1527 aa18.09■□□□□ 0.49
SYPL1-201ENST00000011473 GCC2Q8IWJ2 1684 aa18.07■□□□□ 0.48
SYPL1-201ENST00000011473 KANK1Q14678 1352 aa18.07■□□□□ 0.48
SYPL1-201ENST00000011473 C3P01024 1663 aa18.06■□□□□ 0.48
SYPL1-201ENST00000011473 NUP155O75694 1391 aa18.05■□□□□ 0.48
SYPL1-201ENST00000011473 FBXO31Q5XUX0 539 aaPredicted RBP18.05■□□□□ 0.48
SYPL1-201ENST00000011473 CEP152O94986 1710 aa18.05■□□□□ 0.48
SYPL1-201ENST00000011473 UNC13BO14795 1591 aa18.03■□□□□ 0.48
SYPL1-201ENST00000011473 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
SYPL1-201ENST00000011473 VWDEQ8N2E2 1590 aa18.03■□□□□ 0.48
SYPL1-201ENST00000011473 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
SYPL1-201ENST00000011473 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.48
SYPL1-201ENST00000011473 SETD5Q9C0A6 1442 aa18.02■□□□□ 0.48
SYPL1-201ENST00000011473 FAM135AQ9P2D6 1515 aa18.02■□□□□ 0.48
SYPL1-201ENST00000011473 ZC3H13Q5T200 1668 aaKnown RBP18.01■□□□□ 0.47
SYPL1-201ENST00000011473 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
SYPL1-201ENST00000011473 CAMSAP1Q5T5Y3 1602 aa18■□□□□ 0.47
SYPL1-201ENST00000011473 PZPP20742 1482 aa18■□□□□ 0.47
SYPL1-201ENST00000011473 NPATQ14207 1427 aa18■□□□□ 0.47
SYPL1-201ENST00000011473 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
SYPL1-201ENST00000011473 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
SYPL1-201ENST00000011473 IQGAP3Q86VI3 1631 aa17.96■□□□□ 0.47
SYPL1-201ENST00000011473 ARHGAP31Q2M1Z3 1444 aa17.95■□□□□ 0.46
SYPL1-201ENST00000011473 ERVK-7P63135 1459 aa17.94■□□□□ 0.46
SYPL1-201ENST00000011473 TNRQ92752 1358 aa17.94■□□□□ 0.46
SYPL1-201ENST00000011473 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
SYPL1-201ENST00000011473 HSPA2P54652 639 aa17.93■□□□□ 0.46
SYPL1-201ENST00000011473 TET3O43151 1660 aa17.93■□□□□ 0.46
SYPL1-201ENST00000011473 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
SYPL1-201ENST00000011473 UHRF1BP1Q6BDS2 1440 aa17.92■□□□□ 0.46
SYPL1-201ENST00000011473 FOXD1Q16676 465 aa17.91■□□□□ 0.46
SYPL1-201ENST00000011473 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
SYPL1-201ENST00000011473 PKD2Q13563 968 aa17.9■□□□□ 0.46
SYPL1-201ENST00000011473 CFAP65Q6ZU64 1925 aaKnown RBP17.9■□□□□ 0.46
SYPL1-201ENST00000011473 E9PCH4 1651 aa17.89■□□□□ 0.46
SYPL1-201ENST00000011473 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.46
SYPL1-201ENST00000011473 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
SYPL1-201ENST00000011473 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
SYPL1-201ENST00000011473 MYO3AQ8NEV4 1616 aa17.88■□□□□ 0.45
SYPL1-201ENST00000011473 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
SYPL1-201ENST00000011473 NOS1P29475 1434 aa17.87■□□□□ 0.45
SYPL1-201ENST00000011473 SYNMO15061 1565 aa17.86■□□□□ 0.45
SYPL1-201ENST00000011473 IDI1Q13907 227 aa17.85■□□□□ 0.45
SYPL1-201ENST00000011473 UGGT1Q9NYU2 1555 aa17.85■□□□□ 0.45
SYPL1-201ENST00000011473 CEP170BQ9Y4F5 1589 aaPredicted RBP17.85■□□□□ 0.45
SYPL1-201ENST00000011473 SETD1BQ9UPS6 1966 aaKnown RBP17.83■□□□□ 0.44
SYPL1-201ENST00000011473 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
SYPL1-201ENST00000011473 NLRP1Q9C000 1473 aa17.82■□□□□ 0.44
SYPL1-201ENST00000011473 HRCP23327 699 aa17.82■□□□□ 0.44
SYPL1-201ENST00000011473 PLA2R1Q13018 1463 aa17.8■□□□□ 0.44
SYPL1-201ENST00000011473 PTPRTO14522 1441 aa17.79■□□□□ 0.44
SYPL1-201ENST00000011473 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
SYPL1-201ENST00000011473 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
SYPL1-201ENST00000011473 ZNF142P52746 1687 aaPredicted RBP17.79■□□□□ 0.44
SYPL1-201ENST00000011473 CHGAP10645 457 aaKnown RBP17.78■□□□□ 0.44
SYPL1-201ENST00000011473 ACIN1Q9UKV3 1341 aaKnown RBP17.78■□□□□ 0.44
SYPL1-201ENST00000011473 PIK3C2BO00750 1634 aa17.78■□□□□ 0.44
SYPL1-201ENST00000011473 SPHKAPQ2M3C7 1700 aa17.77■□□□□ 0.43
SYPL1-201ENST00000011473 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
SYPL1-201ENST00000011473 TRPM2O94759 1503 aa17.75■□□□□ 0.43
SYPL1-201ENST00000011473 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
SYPL1-201ENST00000011473 UBR1Q8IWV7 1749 aa17.73■□□□□ 0.43
SYPL1-201ENST00000011473 CLTCL1P53675 1640 aa17.73■□□□□ 0.43
SYPL1-201ENST00000011473 ADGRB3O60242 1522 aa17.72■□□□□ 0.43
SYPL1-201ENST00000011473 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
SYPL1-201ENST00000011473 NUTM2DQ5VT03 806 aaPredicted RBP17.7■□□□□ 0.42
SYPL1-201ENST00000011473 CCDC144AA2RUR9 1427 aa17.7■□□□□ 0.42
SYPL1-201ENST00000011473 TMEM131LA2VDJ0 1609 aa17.7■□□□□ 0.42
SYPL1-201ENST00000011473 TMEM2Q9UHN6 1383 aa17.69■□□□□ 0.42
SYPL1-201ENST00000011473 LTKP29376 864 aa17.69■□□□□ 0.42
SYPL1-201ENST00000011473 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
SYPL1-201ENST00000011473 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
SYPL1-201ENST00000011473 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
SYPL1-201ENST00000011473 ANKLE2Q86XL3 938 aa17.68■□□□□ 0.42
SYPL1-201ENST00000011473 DHX57Q6P158 1386 aaKnown RBP17.68■□□□□ 0.42
SYPL1-201ENST00000011473 TXNDC2Q86VQ3 553 aa17.67■□□□□ 0.42
SYPL1-201ENST00000011473 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
SYPL1-201ENST00000011473 ARHGAP23Q9P227 1491 aa17.65■□□□□ 0.42
SYPL1-201ENST00000011473 SLIT1O75093 1534 aa17.65■□□□□ 0.42
SYPL1-201ENST00000011473 MYO5BQ9ULV0 1848 aa17.65■□□□□ 0.42
SYPL1-201ENST00000011473 KDM5AP29375 1690 aaKnown RBP17.64■□□□□ 0.41
SYPL1-201ENST00000011473 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.41
SYPL1-201ENST00000011473 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
SYPL1-201ENST00000011473 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms