RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 FOXD1Q16676 465 aa28.06■■■□□ 2.08
IFRD1-201ENST00000005558 A2MP01023 1474 aa28.05■■■□□ 2.08
IFRD1-201ENST00000005558 EIF2AK4Q9P2K8 1649 aaKnown RBP28.05■■■□□ 2.08
IFRD1-201ENST00000005558 SLC4A1APQ9BWU0 796 aaKnown RBP28.04■■■□□ 2.08
IFRD1-201ENST00000005558 IQGAP3Q86VI3 1631 aa28.04■■■□□ 2.08
IFRD1-201ENST00000005558 FAM135AQ9P2D6 1515 aa28.04■■■□□ 2.08
IFRD1-201ENST00000005558 MROH1Q8NDA8 1641 aa28.03■■■□□ 2.08
IFRD1-201ENST00000005558 MYT1LQ9UL68 1186 aa28.02■■■□□ 2.08
IFRD1-201ENST00000005558 ANKRD30BQ9BXX2 1392 aa28.01■■■□□ 2.07
IFRD1-201ENST00000005558 BCORL1Q5H9F3 1711 aa27.99■■■□□ 2.07
IFRD1-201ENST00000005558 VWDEQ8N2E2 1590 aa27.99■■■□□ 2.07
IFRD1-201ENST00000005558 PKD2Q13563 968 aa27.97■■■□□ 2.07
IFRD1-201ENST00000005558 RNF17Q9BXT8 1623 aaKnown RBP27.96■■■□□ 2.07
IFRD1-201ENST00000005558 TRHP20396 242 aaPredicted RBP27.95■■■□□ 2.07
IFRD1-201ENST00000005558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.95■■■□□ 2.072e-7■■■■□ 21.5
IFRD1-201ENST00000005558 KIF3BO15066 747 aa27.95■■■□□ 2.06
IFRD1-201ENST00000005558 PRDM15P57071 1507 aaPredicted RBP27.94■■■□□ 2.06
IFRD1-201ENST00000005558 NEUROD1Q13562 356 aa27.92■■■□□ 2.06
IFRD1-201ENST00000005558 SIGLEC1Q9BZZ2 1709 aa27.92■■■□□ 2.06
IFRD1-201ENST00000005558 ATP10AO60312 1499 aa27.88■■■□□ 2.05
IFRD1-201ENST00000005558 REREQ9P2R6 1566 aa27.87■■■□□ 2.05
IFRD1-201ENST00000005558 PLA2R1Q13018 1463 aa27.86■■■□□ 2.05
IFRD1-201ENST00000005558 E9PCH4 1651 aa27.85■■■□□ 2.05
IFRD1-201ENST00000005558 ARHGEF40Q8TER5 1519 aa27.84■■■□□ 2.05
IFRD1-201ENST00000005558 TET3O43151 1660 aa27.83■■■□□ 2.05
IFRD1-201ENST00000005558 RPRD2Q5VT52 1461 aaKnown RBP27.83■■■□□ 2.05
IFRD1-201ENST00000005558 CEP152O94986 1710 aa27.81■■■□□ 2.04
IFRD1-201ENST00000005558 LMTK2Q8IWU2 1503 aa27.8■■■□□ 2.04
IFRD1-201ENST00000005558 TIMELESSQ9UNS1 1208 aa27.79■■■□□ 2.04
IFRD1-201ENST00000005558 AGLP35573 1532 aa27.79■■■□□ 2.04
IFRD1-201ENST00000005558 GGT6Q6P531 493 aa27.75■■■□□ 2.03
IFRD1-201ENST00000005558 KANK1Q14678 1352 aa27.75■■■□□ 2.03
IFRD1-201ENST00000005558 ABCC3O15438 1527 aa27.74■■■□□ 2.03
IFRD1-201ENST00000005558 EFCAB6Q5THR3 1501 aa27.74■■■□□ 2.03
IFRD1-201ENST00000005558 PPP1R15AO75807 674 aaPredicted RBP27.71■■■□□ 2.03
IFRD1-201ENST00000005558 PTPRTO14522 1441 aa27.71■■■□□ 2.03
IFRD1-201ENST00000005558 TONSLQ96HA7 1378 aa27.69■■■□□ 2.02
IFRD1-201ENST00000005558 SPHKAPQ2M3C7 1700 aa27.68■■■□□ 2.02
IFRD1-201ENST00000005558 L3MBTL2Q969R5 705 aa27.67■■■□□ 2.02
IFRD1-201ENST00000005558 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
IFRD1-201ENST00000005558 TRPM2O94759 1503 aa27.65■■■□□ 2.02
IFRD1-201ENST00000005558 ZC3H13Q5T200 1668 aaKnown RBP27.64■■■□□ 2.02
IFRD1-201ENST00000005558 NPATQ14207 1427 aa27.64■■■□□ 2.02
IFRD1-201ENST00000005558 WASHC2CQ9Y4E1 1318 aa27.62■■■□□ 2.01
IFRD1-201ENST00000005558 CLTCL1P53675 1640 aa27.6■■■□□ 2.01
IFRD1-201ENST00000005558 CCDC144AA2RUR9 1427 aa27.6■■■□□ 2.01
IFRD1-201ENST00000005558 CFAP65Q6ZU64 1925 aaKnown RBP27.59■■■□□ 2.01
IFRD1-201ENST00000005558 ARHGAP31Q2M1Z3 1444 aa27.57■■■□□ 2
IFRD1-201ENST00000005558 UGGT1Q9NYU2 1555 aa27.56■■■□□ 2
IFRD1-201ENST00000005558 CLTCQ00610 1675 aaKnown RBP27.54■■■□□ 2
IFRD1-201ENST00000005558 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
IFRD1-201ENST00000005558 NOS1P29475 1434 aa27.53■■■□□ 2
IFRD1-201ENST00000005558 PPP6R1Q9UPN7 881 aa27.53■■■□□ 2
IFRD1-201ENST00000005558 NBPF8Q3BBV2 869 aa27.52■■■□□ 2
IFRD1-201ENST00000005558 MLECQ14165 292 aa27.5■■□□□ 1.99
IFRD1-201ENST00000005558 SYNMO15061 1565 aa27.5■■□□□ 1.99
IFRD1-201ENST00000005558 PREX1Q8TCU6 1659 aa27.47■■□□□ 1.99
IFRD1-201ENST00000005558 CNTLNQ9NXG0 1405 aa27.46■■□□□ 1.99
IFRD1-201ENST00000005558 PIK3C2BO00750 1634 aa27.46■■□□□ 1.99
IFRD1-201ENST00000005558 UHRF1BP1Q6BDS2 1440 aa27.44■■□□□ 1.98
IFRD1-201ENST00000005558 NEURL4Q96JN8 1562 aa27.44■■□□□ 1.98
IFRD1-201ENST00000005558 MROH2AA6NES4 1674 aa27.42■■□□□ 1.98
IFRD1-201ENST00000005558 FBXO31Q5XUX0 539 aaPredicted RBP27.41■■□□□ 1.98
IFRD1-201ENST00000005558 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
IFRD1-201ENST00000005558 RGL3Q3MIN7 710 aa27.41■■□□□ 1.98
IFRD1-201ENST00000005558 KIF1BO60333 1816 aa27.4■■□□□ 1.98
IFRD1-201ENST00000005558 ERVK-7P63135 1459 aa27.39■■□□□ 1.97
IFRD1-201ENST00000005558 DCAF11Q8TEB1 546 aa27.39■■□□□ 1.97
IFRD1-201ENST00000005558 ADGRB3O60242 1522 aa27.37■■□□□ 1.97
IFRD1-201ENST00000005558 ZNF316A6NFI3 1004 aaPredicted RBP27.37■■□□□ 1.97
IFRD1-201ENST00000005558 ZMYM3Q14202 1370 aa27.36■■□□□ 1.97
IFRD1-201ENST00000005558 SPATA31D1Q6ZQQ2 1576 aa27.36■■□□□ 1.97
IFRD1-201ENST00000005558 KDM2AQ9Y2K7 1162 aa27.34■■□□□ 1.97
IFRD1-201ENST00000005558 IFT172Q9UG01 1749 aa27.33■■□□□ 1.97
IFRD1-201ENST00000005558 PRAG1Q86YV5 1406 aa27.32■■□□□ 1.96
IFRD1-201ENST00000005558 IDI1Q13907 227 aa27.32■■□□□ 1.96
IFRD1-201ENST00000005558 FER1L4A9Z1Z3 1794 aa27.28■■□□□ 1.96
IFRD1-201ENST00000005558 MYO5BQ9ULV0 1848 aa27.28■■□□□ 1.96
IFRD1-201ENST00000005558 RALGAPBQ86X10 1494 aa27.27■■□□□ 1.96
IFRD1-201ENST00000005558 TRPM1Q7Z4N2 1603 aa27.27■■□□□ 1.96
IFRD1-201ENST00000005558 TMEM131LA2VDJ0 1609 aa27.27■■□□□ 1.96
IFRD1-201ENST00000005558 MADDQ8WXG6 1647 aa27.27■■□□□ 1.96
IFRD1-201ENST00000005558 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
IFRD1-201ENST00000005558 SLC52A1Q9NWF4 448 aa27.25■■□□□ 1.95
IFRD1-201ENST00000005558 C3P01024 1663 aa27.24■■□□□ 1.95
IFRD1-201ENST00000005558 PPLO60437 1756 aa27.24■■□□□ 1.95
IFRD1-201ENST00000005558 ADAMTSL3P82987 1691 aa27.22■■□□□ 1.95
IFRD1-201ENST00000005558 HIRIP3Q9BW71 556 aaPredicted RBP27.21■■□□□ 1.95
IFRD1-201ENST00000005558 ESF1Q9H501 851 aaKnown RBP27.21■■□□□ 1.95
IFRD1-201ENST00000005558 MYOM2P54296 1465 aa27.21■■□□□ 1.95
IFRD1-201ENST00000005558 NRXN1Q9ULB1 1477 aa27.2■■□□□ 1.94
IFRD1-201ENST00000005558 CEBPAP49715 358 aaPredicted RBP27.19■■□□□ 1.94
IFRD1-201ENST00000005558 NEXMIFQ5QGS0 1516 aa27.18■■□□□ 1.94
IFRD1-201ENST00000005558 CHGAP10645 457 aaKnown RBP27.18■■□□□ 1.94
IFRD1-201ENST00000005558 ADGRF5Q8IZF2 1346 aa27.17■■□□□ 1.94
IFRD1-201ENST00000005558 NBPF1Q3BBV0 1214 aa27.17■■□□□ 1.94
IFRD1-201ENST00000005558 HSPA5P11021 654 aaKnown RBP27.16■■□□□ 1.94
IFRD1-201ENST00000005558 STAC3Q96MF2 364 aa27.16■■□□□ 1.94
IFRD1-201ENST00000005558 GPRASP1Q5JY77 1395 aa27.14■■□□□ 1.94
IFRD1-201ENST00000005558 RIMS1Q86UR5 1692 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms