RNA–Protein interactions for RNA: ENSMUST00000159592.7

Ssh1-204, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ssh1, Length 8,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-204ENSMUST00000159592 Rock1P70335 1354 aa16.78■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Smarce1O54941 411 aaKnown RBP16.78■□□□□ 0.28
Ssh1-204ENSMUST00000159592 Q3TQI7 289 aaKnown RBP16.78■□□□□ 0.28
Ssh1-204ENSMUST00000159592 MecomP14404 1042 aa16.77■□□□□ 0.27
Ssh1-204ENSMUST00000159592 CrebrfQ8CDG5 640 aaKnown RBP16.77■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Sycp2Q9CUU3 1500 aa16.77■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Ccdc146E9Q9F7 977 aa16.76■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Crybg2B7ZCC2 1516 aa16.76■□□□□ 0.27
Ssh1-204ENSMUST00000159592 IbspQ61711 324 aa16.76■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Pibf1E9Q6K3 756 aa16.76■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Esx1O88933 382 aa16.76■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Dapk1Q80YE7 1442 aa16.75■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Brpf1B2RRD7 1212 aa16.73■□□□□ 0.27
Ssh1-204ENSMUST00000159592 AknaQ80VW7 1404 aa16.72■□□□□ 0.27
Ssh1-204ENSMUST00000159592 R3hcc1Q8BSI6 488 aa16.72■□□□□ 0.27
Ssh1-204ENSMUST00000159592 ScribQ80U72 1612 aa16.71■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Tsen2Q6P7W5 460 aa16.71■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Fan1Q69ZT1 1020 aa16.71■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Casq1O09165 405 aa16.71■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Pde3bQ61409 1100 aa16.71■□□□□ 0.27
Ssh1-204ENSMUST00000159592 Fbxo2Q80UW2 297 aa16.7■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Atp6v1dP57746 247 aa16.7■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Ccdc60Q8C4J0 545 aa16.69■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Spag9Q58A65 1321 aaKnown RBP16.69■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Ankrd36D3Z4K0 1415 aa16.68■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Rpgrip1lQ8CG73 1264 aa16.68■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Ttll13A4Q9F6 804 aa16.68■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Pds5bQ4VA53 1446 aaKnown RBP16.68■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Sf3a1Q8K4Z5 791 aaKnown RBP16.67■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Carmil1Q6EDY6 1374 aa16.67■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Filip1lQ6P6L0 1131 aa16.67■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Eif4g2Q62448 906 aaKnown RBP16.67■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Rabep1O35551 862 aa16.66■□□□□ 0.26
Ssh1-204ENSMUST00000159592 KarsQ99MN1 595 aaKnown RBP16.66■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Pdcl3Q8BVF2 240 aa16.66■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Prkrip1Q9CWV6 186 aaKnown RBP16.66■□□□□ 0.26
Ssh1-204ENSMUST00000159592 St18Q80TY4 1045 aa16.66■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Mical1Q8VDP3 1048 aa16.66■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Cspp1B2RX88 1205 aa16.65■□□□□ 0.26
Ssh1-204ENSMUST00000159592 Utp3Q9JI13 469 aaKnown RBP16.65■□□□□ 0.26
Ssh1-204ENSMUST00000159592 MyclP10166 368 aa16.64■□□□□ 0.25
Ssh1-204ENSMUST00000159592 GsdmaQ9EST1 446 aa16.63■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Arid3cA6PWV5 409 aa16.63■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Samd1D3YXK1 519 aa16.63■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Cgnl1Q6AW69 1298 aa16.63■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Kif3bQ61771 747 aa16.63■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Tpm3-rs7D3Z2H9 248 aa16.63■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Kif7B7ZNG0 1348 aa16.63■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Smarca4Q3TKT4 1613 aaKnown RBP16.62■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Cux1P53564 1515 aa16.62■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Trim58Q5NCC9 485 aa16.62■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Pank1Q8K4K6 548 aa16.61■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Ccer1Q9CQL2 403 aa16.61■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Cux2P70298 1426 aa16.61■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Sox12Q04890 314 aa16.61■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Zscan10Q3URR7 782 aa16.61■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Kif16bB1AVY7 1312 aa16.61■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Dhx57Q6P5D3 1388 aaKnown RBP16.61■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Slc4a2P13808 1237 aaKnown RBP16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 G3bp1P97855 465 aaKnown RBP16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Ncapd3Q6ZQK0 1506 aa16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Ccdc183A2AJB1 534 aa16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Fam184bQ0KK56 942 aa16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Ralbp1Q62172 648 aa16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Chmp4cQ9D7F7 232 aa16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Kcnh8P59111 1102 aa16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Ccdc30Q8BVF4 654 aa16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 SetQ9EQU5 289 aaKnown RBP16.6■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Slc4a10Q5DTL9 1118 aa16.59■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Tomm22Q9CPQ3 142 aa16.59■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Cc2d1aQ8K1A6 943 aa16.59■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Glipr1l2Q9CQ35 332 aa16.59■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Map7d2A2AG50 781 aa16.58■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Lemd3Q9WU40 921 aa16.58■□□□□ 0.25
Ssh1-204ENSMUST00000159592 Gripap1Q8VD04 806 aa16.58■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Stard8Q8K031 1019 aa16.58■□□□□ 0.24
Ssh1-204ENSMUST00000159592 CenpjQ569L8 1344 aa16.58■□□□□ 0.24
Ssh1-204ENSMUST00000159592 PnisrA2AJT4 805 aaKnown RBP16.57■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Psme1P97371 249 aa16.57■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Kif4P33174 1231 aa16.56■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Polr3gQ6NXY9 223 aa16.56■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Nol10Q5RJG1 687 aaKnown RBP16.56■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Usp40Q8BWR4 1235 aa16.56■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Nap1l3Q794H2 544 aa16.55■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Ubap1lG3UW59 384 aa16.55■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Sart1Q9Z315 806 aaKnown RBP16.54■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Sh3bgrQ9WUZ7 214 aa16.54■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Phactr2B1AVP0 632 aa16.54■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Vps8Q0P5W1 1427 aa16.54■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Taf3Q5HZG4 932 aa16.53■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Chmp3Q9CQ10 224 aa16.53■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Plekhh1Q80TI1 1356 aa16.53■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Tpd52l1O54818 204 aa16.52■□□□□ 0.24
Ssh1-204ENSMUST00000159592 Tnpo1Q8BFY9 898 aaKnown RBP16.52■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Washc2Q6PGL7 1334 aa16.51■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Q7TT23 1179 aa16.51■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Top2aQ01320 1528 aaKnown RBP16.51■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Txndc2Q6P902 515 aa16.5■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Nutm1Q8BHP2 1126 aa16.5■□□□□ 0.23
Ssh1-204ENSMUST00000159592 Triml2E9PW10 424 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms