RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 MetrnQ8C1Q4 291 aa7.82□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 AaasP58742 546 aa7.81□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Map4k4P97820 1233 aaKnown RBP7.81□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Mre11Q61216 706 aa7.81□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Ints3Q7TPD0 1041 aaKnown RBP7.81□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Krtap3-2Q9D638 99 aa7.81□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Krtap3-3Q9D7P0 99 aa7.81□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Il27Q8K3I6 234 aa7.8□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Lamc3Q9R0B6 1581 aa7.8□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Dhx29Q6PGC1 1365 aaKnown RBP7.79□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Cep164Q5DU05 1446 aa7.79□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Ttll13A4Q9F6 804 aa7.78□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 ArxO35085 564 aa7.78□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 OscarQ8VBT3 265 aa7.78□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Spata31d1aE9QA35 1336 aa7.77□□□□□ -1.16
Hmgb1-203ENSMUST00000110505 Vars2Q3U2A8 1060 aa7.76□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Foxd4Q60688 444 aa7.76□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Tmc3Q7TQ69 1130 aa7.75□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Unc5aQ8K1S4 898 aa7.75□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Emp3O35912 163 aa7.75□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Ddx11Q6AXC6 880 aa7.75□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Rusc2Q80U22 1514 aa7.74□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Farp1F8VPU2 1048 aa7.74□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Art1Q60935 325 aa7.74□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Zcchc11B2RX14 1644 aaKnown RBP7.74□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Crocc2F6XLV1 1638 aa7.72□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Ttbk1Q6PCN3 1308 aa7.72□□□□□ -1.17
Hmgb1-203ENSMUST00000110505 Krtap4-2B1AQ85 167 aa7.71□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 LrpprcQ6PB66 1392 aaKnown RBP7.7□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Mkrn3Q60764 544 aa7.7□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Arhgef5E9Q7D5 1581 aa7.7□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Rtl1Q7M732 1744 aa7.7□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Cacna1iE9Q7P2 2199 aa7.69□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Adgrl3Q80TS3 1537 aa7.69□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Ccdc18Q640L5 1455 aa7.69□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Ift140E9PY46 1464 aa7.68□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Wfs1P56695 890 aa7.67□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Zeb1Q64318 1117 aa7.67□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Kcnc4Q8R1C0 628 aa7.67□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Fam193bQ3U2K0 892 aa7.66□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Fam160a1Q505K2 1081 aa7.66□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 NntQ61941 1086 aaKnown RBP7.66□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Suz12Q80U70 741 aaKnown RBP7.66□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Camsap1A2AHC3 1581 aa7.65□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 Pax4P32115 349 aa7.65□□□□□ -1.18
Hmgb1-203ENSMUST00000110505 PogzQ8BZH4 1409 aaKnown RBP7.64□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 TnnQ80Z71 1560 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Cep170Q6A065 1588 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 PtprkP35822 1457 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Ubap1lG3UW59 384 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Psen1P49769 467 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Slc27a5Q4LDG0 689 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Gm156Q58A37 223 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Disp1Q3TDN0 1521 aa7.63□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 PtprtQ99M80 1454 aa7.62□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Gm36176A0A1W2P8D5 158 aa7.62□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Map2k7Q8CE90 535 aa7.62□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Suv39h2Q9EQQ0 477 aa7.62□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Gpc1Q9QZF2 557 aa7.61□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Gapvd1Q6PAR5 1458 aa7.61□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Duox2A2AQ99 1517 aa7.61□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 GnpatP98192 678 aa7.61□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Pcdhgb4Q91XX6 912 aa7.61□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Rhox13F6YCR7 232 aa7.6□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Spryd3E9Q9B3 442 aa7.59□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Klra1P20937 262 aa7.59□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 Hmx2P43687 273 aa7.59□□□□□ -1.19
Hmgb1-203ENSMUST00000110505 LtbrP50284 415 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Wbp1lQ8BGW2 348 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Tmub1Q9JMG3 245 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Cngb1E1AZ71 1325 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Erbb4Q61527 1308 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Nup160Q9Z0W3 1402 aaKnown RBP7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Golga3P55937 1487 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Gm20503G3UZK1 150 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Scube2Q9JJS0 997 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Samd9lQ69Z37 1561 aa7.58□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Tsr1Q5SWD9 803 aa7.57□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Gpr37l1Q99JG2 481 aa7.57□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Gpatch8A2A6A1 1505 aa7.56□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Pprc1Q6NZN1 1644 aa7.56□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Slc4a9E9PUP3 929 aa7.56□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Clcn1Q64347 994 aa7.56□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Jph1Q9ET80 660 aa7.56□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Cc2d2bA0A286YDU8 1405 aa7.56□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Rad54l2Q99NG0 1466 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Stag3O70576 1240 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Ppp4cP97470 307 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Scaf8Q6DID3 1268 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Rccd1Q8BTU7 377 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Tmem132aQ922P8 1018 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Irx6Q9ER75 438 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Fgd6Q69ZL1 1399 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 AknaQ80VW7 1404 aa7.55□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Setd1bQ8CFT2 1985 aa7.54□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 ZfrO88532 1074 aaKnown RBP7.54□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Zbtb38Q3LR78 1197 aa7.54□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Ripply1Q2WG77 201 aa7.53□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Lce1mQ9CR91 182 aa7.53□□□□□ -1.2
Hmgb1-203ENSMUST00000110505 Grin2bQ01097 1482 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms