RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Gm21969J3QJZ1 289 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Hap1O35668 628 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Ciz1Q8VEH2 845 aa8.49□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Polr1aO35134 1717 aaKnown RBP8.48□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Ifit1bl1D3Z6F0 470 aa8.48□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Cnga1P29974 684 aa8.48□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Filip1lQ6P6L0 1131 aa8.48□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Cep162Q6ZQ06 1403 aa8.48□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Chmp4cQ9D7F7 232 aa8.48□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Tmco5bQ80X59 307 aa8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Nap1l3Q794H2 544 aa8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Ppp1r18Q8BQ30 594 aa8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Kri1Q8VDQ9 704 aaKnown RBP8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Sf3a1Q8K4Z5 791 aaKnown RBP8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Kif7B7ZNG0 1348 aa8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 WrnO09053 1401 aa8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Cux1P53564 1515 aa8.47□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Chaf1aQ9QWF0 911 aa8.46□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Mfap1aC0HKD8 439 aaKnown RBP8.46□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Mfap1bC0HKD9 439 aaKnown RBP8.46□□□□□ -1.05
Scn3a-202ENSMUST00000100069 Hmgn5Q9JL35 406 aa8.46□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Nup155Q99P88 1391 aaKnown RBP8.46□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Ggt6Q6PDE7 497 aa8.46□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Brpf1B2RRD7 1212 aa8.46□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Chmp3Q9CQ10 224 aa8.46□□□□□ -1.06
Scn3a-202ENSMUST00000100069 PrkcshO08795 521 aa8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Taf3Q5HZG4 932 aa8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 PhaxQ9JJT9 385 aaKnown RBP8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Tnnt1O88346 262 aa8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Dhx8A2A4P0 1244 aaKnown RBP8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Srcin1Q9QWI6 1250 aa8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Kif3cO35066 796 aa8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 KinQ8K339 391 aa8.45□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Ap3b2Q9JME5 1082 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 AknaQ80VW7 1404 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Mre11Q61216 706 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Rpap1Q80TE0 1409 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Rnf20Q5DTM8 973 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Isy1Q69ZQ2 285 aaKnown RBP8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 UvssaQ9D479 717 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Mphosph9A6H5Y1 991 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Vps53Q8CCB4 832 aa8.44□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Hspa5P20029 655 aaKnown RBP8.43□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Dcaf11Q91VU6 549 aa8.43□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Gabpb2P81069 414 aa8.43□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Ppm1eQ80TL0 749 aa8.43□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Hoxa7P02830 229 aa8.43□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Aebp1Q640N1 1128 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Gcom1E9PZ54 550 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 MyzapQ3UIJ9 466 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Txndc2Q6P902 515 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 CrebrfQ8CDG5 640 aaKnown RBP8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Sh3bgrQ9WUZ7 214 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Crybg2B7ZCC2 1516 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Lrrcc1Q69ZB0 1026 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Casq1O09165 405 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Exoc6Q8R313 802 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Ccdc173A0JLY1 547 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Ksr2Q3UVC0 959 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Ncoa2Q61026 1462 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Birc3O08863 600 aa8.42□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Znhit6Q3UFB2 460 aaKnown RBP8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Stk31Q99MW1 1018 aa8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Dctn1O08788 1281 aa8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Trak1Q6PD31 939 aa8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Kif16bB1AVY7 1312 aa8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 EzrP26040 586 aaKnown RBP8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Rufy1Q8BIJ7 712 aa8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Necab1Q8BG18 352 aa8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Stk26Q99JT2 416 aa8.41□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Tceal9Q9DD24 104 aa8.4□□□□□ -1.06
Scn3a-202ENSMUST00000100069 CalrP14211 416 aaKnown RBP8.4□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Rock1P70335 1354 aa8.4□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Krt82Q99M74 516 aa8.4□□□□□ -1.06
Scn3a-202ENSMUST00000100069 Cchcr1Q8K2I2 770 aa8.4□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Ccnb3Q810T2 1396 aa8.4□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Ralbp1Q62172 648 aa8.4□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Cttnbp2B9EJA2 1648 aa8.39□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Kif4P33174 1231 aa8.39□□□□□ -1.07
Scn3a-202ENSMUST00000100069 NaspQ99MD9 773 aaKnown RBP8.39□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Cwc15Q9JHS9 229 aaKnown RBP8.39□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Carmil1Q6EDY6 1374 aa8.39□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Gpatch3Q8BIY1 525 aa8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 GorabQ8BRM2 368 aa8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Ccdc43Q9CR29 222 aaKnown RBP8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 AppP12023 770 aa8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Gripap1Q8VD04 806 aa8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Tomm22Q9CPQ3 142 aa8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Anp32eP97822 260 aaKnown RBP8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Rec8Q8C5S7 591 aa8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Wdr78E9PYY5 807 aa8.38□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Cluap1Q8R3P7 413 aa8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Erc2Q6PH08 957 aa8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Smg6P61406 1418 aaKnown RBP8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Cplx1P63040 134 aa8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 HmmrQ00547 794 aaKnown RBP8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Gsdma3Q5Y4Y6 464 aa8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Ppp4r3bQ922R5 820 aa8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Trim29Q8R2Q0 587 aa8.37□□□□□ -1.07
Scn3a-202ENSMUST00000100069 Atl3Q91YH5 541 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms