RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Usp40Q8BWR4 1235 aa21.75■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Prex2Q3LAC4 1598 aa21.74■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Ppp4r2Q0VGB7 417 aa21.71■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Mink1Q9JM52 1308 aa21.7■■□□□ 1.07
Ubp1-202ENSMUST00000084885 Eif4g1Q6NZJ6 1600 aaKnown RBP21.7■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Prdm16A2A935 1275 aa21.7■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Q9D9H8 365 aa21.69■■□□□ 1.06
Ubp1-202ENSMUST00000084885 PrkcshO08795 521 aa21.68■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Ankrd36D3Z4K0 1415 aa21.68■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Il16O54824 1322 aa21.68■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Arhgef40Q3UPH7 1517 aa21.67■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Anp32aO35381 247 aa21.67■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Birc3O08863 600 aa21.66■■□□□ 1.06
Ubp1-202ENSMUST00000084885 ArxO35085 564 aa21.66■■□□□ 1.06
Ubp1-202ENSMUST00000084885 Abcc1O35379 1528 aa21.63■■□□□ 1.05
Ubp1-202ENSMUST00000084885 Tmf1B9EKI3 1091 aa21.62■■□□□ 1.05
Ubp1-202ENSMUST00000084885 Tcerg1Q8CGF7 1100 aaKnown RBP21.61■■□□□ 1.05
Ubp1-202ENSMUST00000084885 Igf1rQ60751 1373 aa21.61■■□□□ 1.05
Ubp1-202ENSMUST00000084885 Slc4a3P16283 1227 aa21.61■■□□□ 1.05
Ubp1-202ENSMUST00000084885 ErbinQ80TH2 1402 aa21.61■■□□□ 1.05
Ubp1-202ENSMUST00000084885 Rapgef6Q5NCJ1 1609 aa21.6■■□□□ 1.05
Ubp1-202ENSMUST00000084885 1700019A02RikA0A087WPV9 146 aa21.58■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Adgrb2Q8CGM1 1561 aa21.58■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Fancd2Q80V62 1450 aa21.58■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Puf60Q3UEB3 564 aaKnown RBP21.57■■□□□ 1.04
Ubp1-202ENSMUST00000084885 CrbnQ8C7D2 445 aa21.57■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Washc2Q6PGL7 1334 aa21.55■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Gapvd1Q6PAR5 1458 aa21.54■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Rusc2Q80U22 1514 aa21.53■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Smg6P61406 1418 aaKnown RBP21.52■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Zscan21Q07231 555 aa21.52■■□□□ 1.04
Ubp1-202ENSMUST00000084885 Q7TT23 1179 aa21.51■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Nsd2Q8BVE8 1365 aa21.51■■□□□ 1.03
Ubp1-202ENSMUST00000084885 U2af1Q9D883 239 aaKnown RBP21.51■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Arhgef12Q8R4H2 1543 aaKnown RBP21.5■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Lmo7E9PYF4 1699 aaKnown RBP21.49■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Mlh3A0A1Y7VMP7 1443 aa21.49■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Esx1O88933 382 aa21.49■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Erich3F6QRE9 1637 aa21.49■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Rpgrip1lQ8CG73 1264 aa21.49■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Speer4f1Q9D5Q6 258 aa21.49■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Znf608Q56A10 1511 aa21.48■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Adamts12Q811B3 1600 aa21.47■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Ttc21bQ0HA38 1315 aa21.47■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Gm6268A2A3U9 297 aa21.46■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Fam184bQ0KK56 942 aa21.46■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Zranb1Q7M760 708 aa21.46■■□□□ 1.03
Ubp1-202ENSMUST00000084885 Pip4k2bQ80XI4 416 aa21.45■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Myom3A2ABU4 1439 aa21.44■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Zscan10Q3URR7 782 aa21.44■■□□□ 1.02
Ubp1-202ENSMUST00000084885 DaxxO35613 739 aa21.43■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Armcx1Q9CX83 456 aa21.43■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Kif7B7ZNG0 1348 aa21.43■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Adcy10Q8C0T9 1614 aa21.43■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Abca5Q8K448 1642 aa21.42■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Atp2b2Q9R0K7 1198 aa21.42■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Mapkbp1Q6NS57 1503 aa21.41■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Wdr43Q6ZQL4 677 aaKnown RBP21.41■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Slc4a2P13808 1237 aaKnown RBP21.4■■□□□ 1.02
Ubp1-202ENSMUST00000084885 Ssh2Q5SW75 1423 aa21.39■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Mapk8ip3Q9ESN9 1337 aa21.39■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Dbr1Q923B1 550 aa21.39■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Eif4g3Q80XI3 1579 aaKnown RBP21.39■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Naip5Q9R016 1403 aa21.38■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Abca16E9PWJ7 1678 aa21.38■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Pibf1E9Q6K3 756 aa21.36■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Caskin1Q6P9K8 1431 aa21.36■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Mak16Q8BGS0 296 aaKnown RBP21.35■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Lmtk2Q3TYD6 1471 aa21.35■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Abcc2Q8VI47 1543 aa21.34■■□□□ 1.01
Ubp1-202ENSMUST00000084885 Golga2Q921M4 999 aa21.34■■□□□ 1.01
Ubp1-202ENSMUST00000084885 U2surpQ6NV83 1029 aaKnown RBP21.33■■□□□ 1.01
Ubp1-202ENSMUST00000084885 CenpjQ569L8 1344 aa21.33■■□□□ 1
Ubp1-202ENSMUST00000084885 Atp7aQ64430 1491 aa21.32■■□□□ 1
Ubp1-202ENSMUST00000084885 OvosQ3UU35 1456 aa21.31■■□□□ 1
Ubp1-202ENSMUST00000084885 Wdr7Q920I9 1489 aa21.31■■□□□ 1
Ubp1-202ENSMUST00000084885 Znf330Q922H9 316 aa21.3■■□□□ 1
Ubp1-202ENSMUST00000084885 HnrnpmQ9D0E1 729 aaKnown RBP21.3■■□□□ 1
Ubp1-202ENSMUST00000084885 B4galnt3Q6L8S8 986 aa21.3■■□□□ 1
Ubp1-202ENSMUST00000084885 Rfx7F8VPJ6 1459 aa21.29■■□□□ 1
Ubp1-202ENSMUST00000084885 Rprd2Q6NXI6 1469 aaKnown RBP21.29■■□□□ 1
Ubp1-202ENSMUST00000084885 AI481877A2ALV5 1481 aa21.29■■□□□ 1
Ubp1-202ENSMUST00000084885 Tsen2Q6P7W5 460 aa21.29■■□□□ 1
Ubp1-202ENSMUST00000084885 Kdm6bQ5NCY0 1641 aa21.28■■□□□ 1
Ubp1-202ENSMUST00000084885 Nolc1E9Q5C9 702 aaKnown RBP21.27■■□□□ 1
Ubp1-202ENSMUST00000084885 Arhgef11Q68FM7 1552 aa21.27■■□□□ 1
Ubp1-202ENSMUST00000084885 Cabp4Q8VHC5 271 aa21.27■■□□□ 1
Ubp1-202ENSMUST00000084885 Asxl2Q8BZ32 1370 aa21.25■□□□□ 0.99
Ubp1-202ENSMUST00000084885 Ptch1Q61115 1434 aa21.25■□□□□ 0.99
Ubp1-202ENSMUST00000084885 Tmco5bQ80X59 307 aa21.25■□□□□ 0.99
Ubp1-202ENSMUST00000084885 PtprtQ99M80 1454 aa21.24■□□□□ 0.99
Ubp1-202ENSMUST00000084885 Upf2A2AT37 1269 aaKnown RBP21.23■□□□□ 0.99
Ubp1-202ENSMUST00000084885 Tnnt1O88346 262 aa21.23■□□□□ 0.99
Ubp1-202ENSMUST00000084885 Gsto1O09131 240 aa21.21■□□□□ 0.99
Ubp1-202ENSMUST00000084885 Rsph4aQ8BYM7 716 aa21.2■□□□□ 0.98
Ubp1-202ENSMUST00000084885 Kdm3bQ6ZPY7 1562 aa21.2■□□□□ 0.98
Ubp1-202ENSMUST00000084885 Znf710Q3U288 666 aa21.2■□□□□ 0.98
Ubp1-202ENSMUST00000084885 Stard8Q8K031 1019 aa21.19■□□□□ 0.98
Ubp1-202ENSMUST00000084885 Ksr2Q3UVC0 959 aa21.19■□□□□ 0.98
Ubp1-202ENSMUST00000084885 Apaf1O88879 1249 aa21.19■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms