RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Rpgrip1lQ8CG73 1264 aa18.77■□□□□ 0.59
Casc4-201ENSMUST00000078752 Dcaf11Q91VU6 549 aa18.76■□□□□ 0.59
Casc4-201ENSMUST00000078752 KnstrnQ9D9Z1 312 aaKnown RBP18.76■□□□□ 0.59
Casc4-201ENSMUST00000078752 Crybg2B7ZCC2 1516 aa18.76■□□□□ 0.59
Casc4-201ENSMUST00000078752 Tmem132aQ922P8 1018 aa18.75■□□□□ 0.59
Casc4-201ENSMUST00000078752 Znf771Q8BJ90 317 aa18.74■□□□□ 0.59
Casc4-201ENSMUST00000078752 Gm973E9Q295 1059 aa18.74■□□□□ 0.59
Casc4-201ENSMUST00000078752 Kcnn1Q9EQR3 537 aa18.73■□□□□ 0.59
Casc4-201ENSMUST00000078752 Scaf1Q5U4C3 1256 aaKnown RBP18.72■□□□□ 0.59
Casc4-201ENSMUST00000078752 Tex2Q6ZPJ0 1128 aaKnown RBP18.72■□□□□ 0.59
Casc4-201ENSMUST00000078752 Gm20521D3Z5F7 333 aa18.71■□□□□ 0.59
Casc4-201ENSMUST00000078752 Irx6Q9ER75 438 aa18.71■□□□□ 0.59
Casc4-201ENSMUST00000078752 Nkx1-2P42580 305 aa18.7■□□□□ 0.58
Casc4-201ENSMUST00000078752 Mrvi1Q9WUX5 899 aaKnown RBP18.7■□□□□ 0.58
Casc4-201ENSMUST00000078752 Fyco1Q8VDC1 1437 aa18.7■□□□□ 0.58
Casc4-201ENSMUST00000078752 Map4P27546 1125 aaKnown RBP18.7■□□□□ 0.58
Casc4-201ENSMUST00000078752 Nectin2P32507 530 aa18.7■□□□□ 0.58
Casc4-201ENSMUST00000078752 Chmp4bQ9D8B3 224 aaKnown RBP18.69■□□□□ 0.58
Casc4-201ENSMUST00000078752 Ylpm1Q9R0I7 1386 aaKnown RBP18.68■□□□□ 0.58
Casc4-201ENSMUST00000078752 Stk11ipQ3TAA7 1072 aa18.68■□□□□ 0.58
Casc4-201ENSMUST00000078752 Cux2P70298 1426 aa18.68■□□□□ 0.58
Casc4-201ENSMUST00000078752 Pnmal2G3X9N3 661 aa18.68■□□□□ 0.58
Casc4-201ENSMUST00000078752 Q7TT23 1179 aa18.68■□□□□ 0.58
Casc4-201ENSMUST00000078752 UacaQ8CGB3 1411 aa18.67■□□□□ 0.58
Casc4-201ENSMUST00000078752 Pank1Q8K4K6 548 aa18.67■□□□□ 0.58
Casc4-201ENSMUST00000078752 Arap1Q4LDD4 1452 aa18.67■□□□□ 0.58
Casc4-201ENSMUST00000078752 Pds5bQ4VA53 1446 aaKnown RBP18.67■□□□□ 0.58
Casc4-201ENSMUST00000078752 Sptbn5F6UCX4 1208 aa18.66■□□□□ 0.58
Casc4-201ENSMUST00000078752 Il4rP16382 810 aa18.66■□□□□ 0.58
Casc4-201ENSMUST00000078752 Arid3cA6PWV5 409 aa18.66■□□□□ 0.58
Casc4-201ENSMUST00000078752 Usp47Q8BY87 1376 aa18.66■□□□□ 0.58
Casc4-201ENSMUST00000078752 RdxP26043 583 aaKnown RBP18.66■□□□□ 0.58
Casc4-201ENSMUST00000078752 Srpk2O54781 681 aaKnown RBP18.65■□□□□ 0.58
Casc4-201ENSMUST00000078752 Fez1Q8K0X8 392 aa18.63■□□□□ 0.57
Casc4-201ENSMUST00000078752 Ifit1bl1D3Z6F0 470 aa18.63■□□□□ 0.57
Casc4-201ENSMUST00000078752 Ppp1r9bQ6R891 817 aaKnown RBP18.63■□□□□ 0.57
Casc4-201ENSMUST00000078752 Chmp4cQ9D7F7 232 aa18.63■□□□□ 0.57
Casc4-201ENSMUST00000078752 Gse1Q3U3C9 1213 aa18.62■□□□□ 0.57
Casc4-201ENSMUST00000078752 Senp3Q9EP97 568 aaKnown RBP18.62■□□□□ 0.57
Casc4-201ENSMUST00000078752 Ankrd36D3Z4K0 1415 aa18.61■□□□□ 0.57
Casc4-201ENSMUST00000078752 Taf3Q5HZG4 932 aa18.6■□□□□ 0.57
Casc4-201ENSMUST00000078752 Ccdc146E9Q9F7 977 aa18.6■□□□□ 0.57
Casc4-201ENSMUST00000078752 Dhx30Q99PU8 1217 aaKnown RBP18.6■□□□□ 0.57
Casc4-201ENSMUST00000078752 Casq1O09165 405 aa18.6■□□□□ 0.57
Casc4-201ENSMUST00000078752 Kif3aP28741 701 aa18.6■□□□□ 0.57
Casc4-201ENSMUST00000078752 Tpd52l1O54818 204 aa18.59■□□□□ 0.57
Casc4-201ENSMUST00000078752 Tmco5bQ80X59 307 aa18.59■□□□□ 0.57
Casc4-201ENSMUST00000078752 Kcnj4P52189 445 aa18.58■□□□□ 0.57
Casc4-201ENSMUST00000078752 Utp3Q9JI13 469 aaKnown RBP18.58■□□□□ 0.57
Casc4-201ENSMUST00000078752 Golga2Q921M4 999 aa18.58■□□□□ 0.56
Casc4-201ENSMUST00000078752 Hsp90b1P08113 802 aaKnown RBP18.57■□□□□ 0.56
Casc4-201ENSMUST00000078752 CgnP59242 1191 aa18.57■□□□□ 0.56
Casc4-201ENSMUST00000078752 Exosc9Q9JHI7 438 aaKnown RBP18.57■□□□□ 0.56
Casc4-201ENSMUST00000078752 MpndQ3TV65 487 aa18.57■□□□□ 0.56
Casc4-201ENSMUST00000078752 Gripap1Q8VD04 806 aa18.57■□□□□ 0.56
Casc4-201ENSMUST00000078752 Cc2d2aQ8CFW7 1633 aa18.56■□□□□ 0.56
Casc4-201ENSMUST00000078752 Ksr2Q3UVC0 959 aa18.56■□□□□ 0.56
Casc4-201ENSMUST00000078752 Dhx29Q6PGC1 1365 aaKnown RBP18.54■□□□□ 0.56
Casc4-201ENSMUST00000078752 Isy1Q69ZQ2 285 aaKnown RBP18.54■□□□□ 0.56
Casc4-201ENSMUST00000078752 Frmd3Q8BHD4 595 aa18.54■□□□□ 0.56
Casc4-201ENSMUST00000078752 Irf5P56477 497 aa18.54■□□□□ 0.56
Casc4-201ENSMUST00000078752 Q8BT18 775 aa18.54■□□□□ 0.56
Casc4-201ENSMUST00000078752 Naip1Q9QWK5 1403 aa18.54■□□□□ 0.56
Casc4-201ENSMUST00000078752 Ccnb3Q810T2 1396 aa18.54■□□□□ 0.56
Casc4-201ENSMUST00000078752 Calcoco2A2A6M5 331 aa18.53■□□□□ 0.56
Casc4-201ENSMUST00000078752 Inpp5dQ9ES52 1191 aa18.53■□□□□ 0.56
Casc4-201ENSMUST00000078752 NcapgE9PWG6 1004 aa18.53■□□□□ 0.56
Casc4-201ENSMUST00000078752 PtmsQ9D0J8 101 aaKnown RBP18.53■□□□□ 0.56
Casc4-201ENSMUST00000078752 Nol12Q8BG17 217 aa18.52■□□□□ 0.56
Casc4-201ENSMUST00000078752 Serpina10Q8R121 448 aa18.52■□□□□ 0.56
Casc4-201ENSMUST00000078752 AknaQ80VW7 1404 aa18.52■□□□□ 0.56
Casc4-201ENSMUST00000078752 Pank3Q8R2W9 370 aa18.52■□□□□ 0.55
Casc4-201ENSMUST00000078752 Gys2Q8VCB3 704 aa18.52■□□□□ 0.55
Casc4-201ENSMUST00000078752 Kif16bB1AVY7 1312 aa18.52■□□□□ 0.55
Casc4-201ENSMUST00000078752 1700019A02RikA0A087WPV9 146 aa18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Ppp2r3aB2RXC8 1150 aa18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Plin1Q8CGN5 517 aa18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Arid4aF8VPQ2 1261 aaKnown RBP18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Clcn1Q64347 994 aa18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Dixdc1Q80Y83 711 aa18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Safb2Q80YR5 991 aaKnown RBP18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Zfp644E9QA22 1323 aa18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Tspyl2Q7TQI8 677 aa18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Top2aQ01320 1528 aaKnown RBP18.51■□□□□ 0.55
Casc4-201ENSMUST00000078752 Stag3O70576 1240 aa18.5■□□□□ 0.55
Casc4-201ENSMUST00000078752 Fam114a1Q9D281 569 aa18.5■□□□□ 0.55
Casc4-201ENSMUST00000078752 Rock1P70335 1354 aa18.5■□□□□ 0.55
Casc4-201ENSMUST00000078752 Polr3gQ6NXY9 223 aa18.5■□□□□ 0.55
Casc4-201ENSMUST00000078752 Kif4P33174 1231 aa18.49■□□□□ 0.55
Casc4-201ENSMUST00000078752 U2surpQ6NV83 1029 aaKnown RBP18.49■□□□□ 0.55
Casc4-201ENSMUST00000078752 Ralbp1Q62172 648 aa18.48■□□□□ 0.55
Casc4-201ENSMUST00000078752 Ccdc30Q8BVF4 654 aa18.48■□□□□ 0.55
Casc4-201ENSMUST00000078752 Stk26Q99JT2 416 aa18.48■□□□□ 0.55
Casc4-201ENSMUST00000078752 IqubQ8CDK3 788 aa18.47■□□□□ 0.55
Casc4-201ENSMUST00000078752 Dapk1Q80YE7 1442 aa18.46■□□□□ 0.55
Casc4-201ENSMUST00000078752 Olfml1Q8BSH2 233 aa18.46■□□□□ 0.55
Casc4-201ENSMUST00000078752 Tshz2Q68FE9 1030 aa18.46■□□□□ 0.55
Casc4-201ENSMUST00000078752 Smc5Q8CG46 1101 aaKnown RBP18.46■□□□□ 0.55
Casc4-201ENSMUST00000078752 Sf3a1Q8K4Z5 791 aaKnown RBP18.46■□□□□ 0.55
Casc4-201ENSMUST00000078752 BbxQ8VBW5 907 aa18.46■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms