RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 EzrP26040 586 aaKnown RBP18.07■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Ccdc183A2AJB1 534 aa18.06■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Gtf2e1Q9D0D5 440 aa18.06■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Ralbp1Q62172 648 aa18.06■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Tpm3P21107 285 aaKnown RBP18.06■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 U2af1Q9D883 239 aaKnown RBP18.06■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Ksr2Q3UVC0 959 aa18.05■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Usp47Q8BY87 1376 aa18.05■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Ifit1bl1D3Z6F0 470 aa18.04■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Tmco5bQ80X59 307 aa18.03■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Iffo2Q8R2V2 512 aa18.03■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Trim58Q5NCC9 485 aa18.03■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Trak1Q6PD31 939 aa18.03■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Sh3bp5Q9Z131 463 aa18.03■□□□□ 0.48
Pcdha1-201ENSMUST00000070797 Fez1Q8K0X8 392 aa18.02■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Dcaf11Q91VU6 549 aa18.02■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Ccdc34Q3UI66 367 aa18.01■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Cabp1Q9JLK7 227 aa18.01■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 MyclP10166 368 aa18.01■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Filip1lQ6P6L0 1131 aa18.01■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 1700019A02RikA0A087WPV9 146 aa18.01■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Rfx1P48377 963 aa18.01■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Cnga1P29974 684 aa18■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Eif4g2Q62448 906 aaKnown RBP18■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 PnisrA2AJT4 805 aaKnown RBP18■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 CftrP26361 1476 aa17.99■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Fam13bQ8K2H3 851 aa17.99■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Plekhh2Q8C115 1491 aa17.99■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Tpm3-rs7D3Z2H9 248 aa17.99■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Hmgn5Q9JL35 406 aa17.99■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Anp32eP97822 260 aaKnown RBP17.98■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Irx6Q9ER75 438 aa17.98■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Stard8Q8K031 1019 aa17.98■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Znf330Q922H9 316 aa17.98■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Plekhh1Q80TI1 1356 aa17.97■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Tpd52l1O54818 204 aa17.97■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Rbm10Q99KG3 930 aaKnown RBP17.97■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Utp3Q9JI13 469 aaKnown RBP17.97■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 DmtnQ9WV69 405 aa17.97■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Ppp1r18Q8BQ30 594 aa17.96■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Cwc15Q9JHS9 229 aaKnown RBP17.96■□□□□ 0.47
Pcdha1-201ENSMUST00000070797 Stk24Q99KH8 431 aa17.95■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Nap1l3Q794H2 544 aa17.95■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Srcin1Q9QWI6 1250 aa17.95■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Mrvi1Q9WUX5 899 aaKnown RBP17.95■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Synj1Q8CHC4 1574 aa17.95■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Dusp9Q7TNL7 452 aa17.95■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Pank3Q8R2W9 370 aa17.94■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 KinQ8K339 391 aa17.94■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Rassf8Q8CJ96 419 aa17.94■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Nup155Q99P88 1391 aaKnown RBP17.93■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 U2surpQ6NV83 1029 aaKnown RBP17.93■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 CalrP14211 416 aaKnown RBP17.93■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Slc4a2P13808 1237 aaKnown RBP17.92■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Slc4a1apE9PX68 744 aa17.92■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Pnmal2G3X9N3 661 aa17.92■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Ppp2r3aB2RXC8 1150 aa17.92■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Anapc15P60007 132 aa17.92■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Paxip1Q6NZQ4 1056 aa17.92■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Dapk1Q80YE7 1442 aa17.92■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Cecr2E9Q2Z1 1453 aa17.91■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Ncapd3Q6ZQK0 1506 aa17.91■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Rtf1A2AQ19 715 aaKnown RBP17.91■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Ccdc146E9Q9F7 977 aa17.91■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Vps8Q0P5W1 1427 aa17.91■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 MecomP14404 1042 aa17.91■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Cdkn1cP49919 348 aa17.9■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Cetn4Q8K4K1 168 aa17.9■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Sh3bgrQ9WUZ7 214 aa17.9■□□□□ 0.46
Pcdha1-201ENSMUST00000070797 Tomm22Q9CPQ3 142 aa17.89■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Carmil1Q6EDY6 1374 aa17.88■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Tnpo1Q8BFY9 898 aaKnown RBP17.88■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 KarsQ99MN1 595 aaKnown RBP17.88■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 CrebrfQ8CDG5 640 aaKnown RBP17.87■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Ccnb3Q810T2 1396 aa17.87■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 1700010I14RikQ7TPG0 532 aa17.86■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Ccer1Q9CQL2 403 aa17.86■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Zrsr2Q62377 462 aaKnown RBP17.86■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Gprasp1Q5U4C1 1347 aa17.86■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Dixdc1Q80Y83 711 aa17.85■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Dhx57Q6P5D3 1388 aaKnown RBP17.85■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Sptbn5F6UCX4 1208 aa17.84■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Esx1O88933 382 aa17.84■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Ccdc30Q8BVF4 654 aa17.84■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Inpp5dQ9ES52 1191 aa17.84■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Rpap1Q80TE0 1409 aa17.84■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Rpgrip1lQ8CG73 1264 aa17.84■□□□□ 0.45
Pcdha1-201ENSMUST00000070797 Zscan10Q3URR7 782 aa17.83■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 NaspQ99MD9 773 aaKnown RBP17.83■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Dusp27Q148W8 1138 aa17.83■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Ccdc60Q8C4J0 545 aa17.83■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 G3bp1P97855 465 aaKnown RBP17.82■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Cux1P53564 1515 aa17.81■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Fam184bQ0KK56 942 aa17.81■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Ciz1Q8VEH2 845 aa17.81■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Cttnbp2B9EJA2 1648 aa17.81■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Znhit6Q3UFB2 460 aaKnown RBP17.81■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Ssh1Q76I79 1042 aa17.81■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 Spag9Q58A65 1321 aaKnown RBP17.8■□□□□ 0.44
Pcdha1-201ENSMUST00000070797 AknaQ80VW7 1404 aa17.8■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms