RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Ncoa3O09000 1398 aa12.3□□□□□ -0.44
Ccdc171-201ENSMUST00000053414 Rock2P70336 1388 aa12.29□□□□□ -0.44
Ccdc171-201ENSMUST00000053414 Zmym4A2A791 1549 aaKnown RBP12.29□□□□□ -0.44
Ccdc171-201ENSMUST00000053414 Plb1Q3TTY0 1478 aa12.29□□□□□ -0.44
Ccdc171-201ENSMUST00000053414 Sart3Q9JLI8 962 aaKnown RBP12.28□□□□□ -0.44
Ccdc171-201ENSMUST00000053414 Rpgrip1lQ8CG73 1264 aa12.28□□□□□ -0.44
Ccdc171-201ENSMUST00000053414 CadpsQ80TJ1 1355 aa12.27□□□□□ -0.44
Ccdc171-201ENSMUST00000053414 Abca16E9PWJ7 1678 aa12.27□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Kiaa1551Q5DTW7 1521 aa12.27□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Soga1E1U8D0 1418 aa12.26□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Cpsf1Q9EPU4 1441 aaKnown RBP12.25□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Cabp1Q9JLK7 227 aa12.25□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Mtus2Q3UHD3 1353 aa12.25□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 LrpprcQ6PB66 1392 aaKnown RBP12.25□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Q7TT23 1179 aa12.24□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Tex14Q7M6U3 1450 aa12.23□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Eif4g3Q80XI3 1579 aaKnown RBP12.23□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 NgefQ8CHT1 710 aa12.23□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Kif27Q7M6Z4 1394 aa12.21□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Rrbp1Q99PL5 1605 aaKnown RBP12.21□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Cux2P70298 1426 aa12.21□□□□□ -0.45
Ccdc171-201ENSMUST00000053414 Adamts13Q769J6 1426 aa12.21□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Lrriq1Q0P5X1 1673 aa12.2□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 PxdnQ3UQ28 1475 aa12.2□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Os9Q8K2C7 672 aa12.2□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Zmym3Q9JLM4 1370 aa12.2□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Rapgef6Q5NCJ1 1609 aa12.19□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Ttll5Q8CHB8 1328 aa12.19□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Mroh2aD3Z750 1679 aa12.18□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Znf692Q3U381 531 aa12.18□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 AampJ3QN89 436 aa12.18□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Cul9Q80TT8 1865 aa12.17□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Rundc1Q0VDN7 615 aa12.17□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Zbtb7cQ8VCZ7 619 aa12.17□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Arhgap31A6X8Z5 1425 aa12.16□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Antxr1Q9CZ52 562 aa12.16□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Cfap74Q3UY96 1578 aa12.16□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 MyclP10166 368 aa12.15□□□□□ -0.46
Ccdc171-201ENSMUST00000053414 Myom1Q62234 1667 aaKnown RBP12.14□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Il16O54824 1322 aa12.14□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Mre11Q61216 706 aa12.14□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Zfp777B9EKF4 885 aa12.14□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Plekhh2Q8C115 1491 aa12.14□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Abcc2Q8VI47 1543 aa12.13□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 NudcO35685 332 aaKnown RBP12.12□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Pdcl3Q8BVF2 240 aa12.12□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Smc5Q8CG46 1101 aaKnown RBP12.12□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Znf521Q6KAS7 1311 aa12.12□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 B4galnt3Q6L8S8 986 aa12.12□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Polr3aB2RXC6 1390 aa12.12□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Cwc22Q8C5N3 908 aaKnown RBP12.11□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Usp19Q3UJD6 1360 aa12.11□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 MlecQ6ZQI3 291 aaKnown RBP12.11□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Grin2aP35436 1464 aa12.11□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 DroshaQ5HZJ0 1373 aaKnown RBP12.1□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Ccdc141E9Q8Q6 1531 aa12.1□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Gtf2a1Q99PM3 378 aa12.09□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Ppp1r9bQ6R891 817 aaKnown RBP12.09□□□□□ -0.47
Ccdc171-201ENSMUST00000053414 Mak16Q8BGS0 296 aaKnown RBP12.08□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 DaxxO35613 739 aa12.08□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 AknaQ80VW7 1404 aa12.07□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Mapkbp1Q6NS57 1503 aa12.07□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 PtprgQ05909 1442 aa12.07□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 CanxP35564 591 aaKnown RBP12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Zscan21Q07231 555 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Eif2s2Q99L45 331 aaKnown RBP12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Dnajc5bQ9CQ94 199 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 PrxO55103 1391 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Dnai1Q8C0M8 701 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Atp1b4Q99ME6 356 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Pola1P33609 1465 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Kif16bB1AVY7 1312 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Ddit3P35639 168 aa12.06□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Fam135aQ6NS59 1506 aa12.05□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Rlbp1Q9Z275 317 aa12.05□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Gm16486A0A1D5RMD1 1434 aa12.05□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Rgl3Q3UYI5 709 aa12.05□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Fmn2Q9JL04 1578 aa12.05□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Pdcd11Q6NS46 1862 aaKnown RBP12.04□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Gas2l2Q5SSG4 860 aa12.04□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Dcaf11Q91VU6 549 aa12.04□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Kif2cQ922S8 721 aa12.04□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Robo2Q7TPD3 1470 aa12.04□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Card11Q8CIS0 1159 aa12.04□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Tmc1Q8R4P5 757 aa12.03□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Dbr1Q923B1 550 aa12.03□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Prex2Q3LAC4 1598 aa12.03□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Esx1O88933 382 aa12.03□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Tspyl2Q7TQI8 677 aa12.03□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Rtn4Q99P72 1162 aaKnown RBP12.02□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 DmtnQ9WV69 405 aa12.02□□□□□ -0.48
Ccdc171-201ENSMUST00000053414 Cep170Q6A065 1588 aa12.02□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Pnmal2G3X9N3 661 aa12.01□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Fam208aQ69ZR9 1610 aaKnown RBP12.01□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Rock1P70335 1354 aa12.01□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Il4rP16382 810 aa12.01□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Arid3cA6PWV5 409 aa12.01□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Lrrc9Q8CDN9 1456 aa12.01□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Tulp4Q9JIL5 1547 aa12□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Trak1Q6PD31 939 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms