RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 AqrQ8CFQ3 1481 aaKnown RBP7.28□□□□□ -1.24
Rc3h1-201ENSMUST00000035911 Pprc1Q6NZN1 1644 aa7.28□□□□□ -1.24
Rc3h1-201ENSMUST00000035911 Mcm4P49717 862 aa7.28□□□□□ -1.24
Rc3h1-201ENSMUST00000035911 Plekhg5Q66T02 1073 aa7.28□□□□□ -1.24
Rc3h1-201ENSMUST00000035911 Rpgrip1lQ8CG73 1264 aa7.28□□□□□ -1.24
Rc3h1-201ENSMUST00000035911 3425401B19RikD3Z1D3 1412 aa7.27□□□□□ -1.24
Rc3h1-201ENSMUST00000035911 Ccdc183A2AJB1 534 aa7.27□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Pkd2O35245 966 aa7.27□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Clcn1Q64347 994 aa7.27□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 DekQ7TNV0 380 aaKnown RBP7.27□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Lrriq1Q0P5X1 1673 aa7.27□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Lmod3E9QA62 571 aa7.27□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Usp47Q8BY87 1376 aa7.27□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Il4rP16382 810 aa7.26□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Irf5P56477 497 aa7.26□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Card11Q8CIS0 1159 aa7.26□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Shroom4Q1W617 1475 aa7.26□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Rundc1Q0VDN7 615 aa7.26□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Rgl3Q3UYI5 709 aa7.25□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Duox2A2AQ99 1517 aa7.25□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Tshz2Q68FE9 1030 aa7.25□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Smc5Q8CG46 1101 aaKnown RBP7.25□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Erich6bQ9D4S6 220 aa7.25□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Kif21aQ9QXL2 1672 aa7.25□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Naip2Q9QUK4 1447 aa7.25□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Ssh1Q76I79 1042 aa7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Tnpo1Q8BFY9 898 aaKnown RBP7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Eif4g3Q80XI3 1579 aaKnown RBP7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Kdm2bQ6P1G2 1309 aa7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 PtprkP35822 1457 aa7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Ncbp3Q8BZR9 615 aaKnown RBP7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Dcaf11Q91VU6 549 aa7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Rock2P70336 1388 aa7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Sptbn5F6UCX4 1208 aa7.24□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Tmc1Q8R4P5 757 aa7.23□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Dhx30Q99PU8 1217 aaKnown RBP7.23□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Col17a1Q07563 1470 aa7.23□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Ush1cQ9ES64 910 aa7.23□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Arid4bA2CG63 1314 aaKnown RBP7.23□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Q7TT23 1179 aa7.22□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Slx4Q6P1D7 1565 aa7.22□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Crocc2F6XLV1 1638 aa7.22□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Isy1Q69ZQ2 285 aaKnown RBP7.22□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Lekr1B2RVN1 116 aa7.22□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Gse1Q3U3C9 1213 aa7.22□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 CrbnQ8C7D2 445 aa7.22□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Rabep1O35551 862 aa7.21□□□□□ -1.25
Rc3h1-201ENSMUST00000035911 Dapk1Q80YE7 1442 aa7.21□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Becn1O88597 448 aa7.21□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Ripk4Q9ERK0 786 aa7.2□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Plb1Q3TTY0 1478 aa7.2□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Esx1O88933 382 aa7.2□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 PtmaP26350 111 aa7.2□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Grwd1Q810D6 446 aaKnown RBP7.2□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 KarsQ99MN1 595 aaKnown RBP7.2□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Dhx16G3X8X0 1044 aaKnown RBP7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Antxr1Q9CZ52 562 aa7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Map3k1P53349 1493 aa7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Zcchc11B2RX14 1644 aaKnown RBP7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Pcf11G3X9Z4 1553 aa7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Neurod2Q62414 383 aa7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Urb2E9Q7L1 1524 aaKnown RBP7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Ift140E9PY46 1464 aa7.19□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Mtus2Q3UHD3 1353 aa7.18□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Kif16bB1AVY7 1312 aa7.18□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Mfap1aC0HKD8 439 aaKnown RBP7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Mfap1bC0HKD9 439 aaKnown RBP7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Ak9G3UYQ4 1894 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 MsnP26041 577 aaKnown RBP7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Mroh2bQ7M6Y6 1581 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Gys2Q8VCB3 704 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Aebp1Q640N1 1128 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Fam13bQ8K2H3 851 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Myom3A2ABU4 1439 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Speer4f1Q9D5Q6 258 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Plekhh1Q80TI1 1356 aa7.17□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 A2mQ6GQT1 1474 aa7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Pdcl2Q78Y63 240 aa7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Catsper2A2ARP9 588 aa7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Gm7298A0A0N4SVU1 1476 aa7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Rprd2Q6NXI6 1469 aaKnown RBP7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Cul9Q80TT8 1865 aa7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Cul7Q8VE73 1689 aa7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Samd9lQ69Z37 1561 aa7.16□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Rock1P70335 1354 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Rsph3aQ3UFY4 516 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Tspyl2Q7TQI8 677 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Fez1Q8K0X8 392 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Polr3glQ8R0C0 218 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Tmem132aQ922P8 1018 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Ccnb3Q810T2 1396 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Ppp2r3aB2RXC8 1150 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Cabp1Q9JLK7 227 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Ankrd26Q811D2 1581 aa7.15□□□□□ -1.26
Rc3h1-201ENSMUST00000035911 Zmym3Q9JLM4 1370 aa7.15□□□□□ -1.27
Rc3h1-201ENSMUST00000035911 Rfx1P48377 963 aa7.15□□□□□ -1.27
Rc3h1-201ENSMUST00000035911 Zfp644E9QA22 1323 aa7.15□□□□□ -1.27
Rc3h1-201ENSMUST00000035911 Erbb4Q61527 1308 aa7.15□□□□□ -1.27
Rc3h1-201ENSMUST00000035911 SynmQ70IV5 1561 aa7.14□□□□□ -1.27
Rc3h1-201ENSMUST00000035911 Disp1Q3TDN0 1521 aa7.14□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms