RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Sh3bgrQ9WUZ7 214 aa17.14■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Q3TQI7 289 aaKnown RBP17.13■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Gm21969J3QJZ1 289 aa17.13■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Filip1lQ6P6L0 1131 aa17.13■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Gtf2e1Q9D0D5 440 aa17.13■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Nap1l3Q794H2 544 aa17.13■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Dctn1O08788 1281 aa17.12■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Hspa5P20029 655 aaKnown RBP17.12■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Plin1Q8CGN5 517 aa17.12■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Ylpm1Q9R0I7 1386 aaKnown RBP17.12■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Znf330Q922H9 316 aa17.12■□□□□ 0.33
Col5a1-201ENSMUST00000028280 MyclP10166 368 aa17.11■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Gcom1E9PZ54 550 aa17.1■□□□□ 0.33
Col5a1-201ENSMUST00000028280 MyzapQ3UIJ9 466 aa17.1■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Krt82Q99M74 516 aa17.09■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Odf2A3KGV1 830 aaKnown RBP17.09■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Hap1O35668 628 aa17.09■□□□□ 0.33
Col5a1-201ENSMUST00000028280 A0A1L1SQF0 893 aa17.09■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Pkd2O35245 966 aa17.09■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Mre11Q61216 706 aa17.09■□□□□ 0.33
Col5a1-201ENSMUST00000028280 U2af1Q9D883 239 aaKnown RBP17.08■□□□□ 0.33
Col5a1-201ENSMUST00000028280 Kif27Q7M6Z4 1394 aa17.08■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Chmp3Q9CQ10 224 aa17.07■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Ncbp3Q8BZR9 615 aaKnown RBP17.07■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Exoc6Q8R313 802 aa17.07■□□□□ 0.32
Col5a1-201ENSMUST00000028280 CntlnA2AM05 1397 aa17.07■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Ifit1bl1D3Z6F0 470 aa17.06■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Rock2P70336 1388 aa17.06■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Map4P27546 1125 aaKnown RBP17.06■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Ccar1Q8CH18 1146 aaKnown RBP17.06■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Dixdc1Q80Y83 711 aa17.06■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Tnnt1O88346 262 aa17.06■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Casq1O09165 405 aa17.05■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Pdcl3Q8BVF2 240 aa17.05■□□□□ 0.32
Col5a1-201ENSMUST00000028280 BbxQ8VBW5 907 aa17.05■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Srek1Q8BZX4 494 aaKnown RBP17.05■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Hook1Q8BIL5 728 aa17.04■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Fmn1Q05860 1466 aa17.04■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Cgnl1Q6AW69 1298 aa17.04■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Gripap1Q8VD04 806 aa17.04■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Kif4P33174 1231 aa17.03■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Ccdc43Q9CR29 222 aaKnown RBP17.03■□□□□ 0.32
Col5a1-201ENSMUST00000028280 HmmrQ00547 794 aaKnown RBP17.03■□□□□ 0.32
Col5a1-201ENSMUST00000028280 A0A0U1RNP2 1173 aa17.02■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Hmgn5Q9JL35 406 aa17.02■□□□□ 0.32
Col5a1-201ENSMUST00000028280 Rsph6aQ8CDR2 708 aa17.02■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Baz1bQ9Z277 1479 aa17.01■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Kif3cO35066 796 aa17.01■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Fam13bQ8K2H3 851 aa17■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Q8BT18 775 aa17■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Ubap1lG3UW59 384 aa17■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Evc2Q8K1G2 1220 aa16.99■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Plekhh2Q8C115 1491 aa16.99■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Polr3gQ6NXY9 223 aa16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Gps2Q921N8 327 aa16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Mrvi1Q9WUX5 899 aaKnown RBP16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Mns1Q61884 491 aa16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 HdgfP51859 237 aaKnown RBP16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Ksr2Q3UVC0 959 aa16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Def6Q8C2K1 630 aa16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Stard8Q8K031 1019 aa16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Dcaf11Q91VU6 549 aa16.98■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Rec8Q8C5S7 591 aa16.97■□□□□ 0.31
Col5a1-201ENSMUST00000028280 EzrP26040 586 aaKnown RBP16.96■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Ecm2Q5FW85 670 aa16.96■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Bicd2Q921C5 820 aa16.96■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Stk26Q99JT2 416 aa16.96■□□□□ 0.31
Col5a1-201ENSMUST00000028280 NaspQ99MD9 773 aaKnown RBP16.96■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Mphosph9A6H5Y1 991 aa16.96■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Mex3cQ05A36 652 aaKnown RBP16.96■□□□□ 0.31
Col5a1-201ENSMUST00000028280 Nap1l1P28656 391 aaKnown RBP16.95■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Ccdc173A0JLY1 547 aa16.94■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Ccdc146E9Q9F7 977 aa16.94■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Cplx2P84086 134 aa16.94■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Paf1Q8K2T8 535 aa16.94■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Cep162Q6ZQ06 1403 aa16.94■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Kif3aP28741 701 aa16.93■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Kdm5dQ62240 1548 aa16.93■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Birc3O08863 600 aa16.93■□□□□ 0.3
Col5a1-201ENSMUST00000028280 CrbnQ8C7D2 445 aa16.93■□□□□ 0.3
Col5a1-201ENSMUST00000028280 KinQ8K339 391 aa16.92■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Cplx1P63040 134 aa16.92■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Necab1Q8BG18 352 aa16.92■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Trim55G3X8Y1 545 aa16.92■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Psme1P97371 249 aa16.92■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Slc4a10Q5DTL9 1118 aa16.91■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Rfx1P48377 963 aa16.91■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Trak1Q6PD31 939 aa16.91■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Gpatch3Q8BIY1 525 aa16.91■□□□□ 0.3
Col5a1-201ENSMUST00000028280 PrkcshO08795 521 aa16.91■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Sycp1Q62209 993 aa16.91■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Smg6P61406 1418 aaKnown RBP16.9■□□□□ 0.3
Col5a1-201ENSMUST00000028280 AampJ3QN89 436 aa16.9■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Senp3Q9EP97 568 aaKnown RBP16.9■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Dhx57Q6P5D3 1388 aaKnown RBP16.9■□□□□ 0.3
Col5a1-201ENSMUST00000028280 Nolc1E9Q5C9 702 aaKnown RBP16.89■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Plcd4Q8K3R3 807 aa16.89■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Srcin1Q9QWI6 1250 aa16.89■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Rrp9Q91WM3 475 aaKnown RBP16.88■□□□□ 0.29
Col5a1-201ENSMUST00000028280 Rpap1Q80TE0 1409 aa16.88■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms