RNA–Protein interactions for RNA: ENSMUST00000021046.5

Ddx42-201, Transcript of ATP-dependent RNA helicase DDX42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx42, Length 4,011 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42-201ENSMUST00000021046 Ylpm1Q9R0I7 1386 aaKnown RBP17.11■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Gm973E9Q295 1059 aa17.1■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Kcnj4P52189 445 aa17.1■□□□□ 0.33
Ddx42-201ENSMUST00000021046 KnstrnQ9D9Z1 312 aaKnown RBP17.1■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Arhgap35Q91YM2 1499 aa17.09■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Kif3aP28741 701 aa17.09■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Fam114a1Q9D281 569 aa17.08■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Ankrd36D3Z4K0 1415 aa17.08■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Pank1Q8K4K6 548 aa17.07■□□□□ 0.32
Ddx42-201ENSMUST00000021046 BbxQ8VBW5 907 aa17.07■□□□□ 0.32
Ddx42-201ENSMUST00000021046 NcapgE9PWG6 1004 aa17.07■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Fkbp15Q6P9Q6 1216 aaKnown RBP17.07■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Arid4aF8VPQ2 1261 aaKnown RBP17.06■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Smc5Q8CG46 1101 aaKnown RBP17.06■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Tomm22Q9CPQ3 142 aa17.05■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Kiaa0753Q6A000 959 aa17.05■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Dhx16G3X8X0 1044 aaKnown RBP17.05■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Chmp4cQ9D7F7 232 aa17.04■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Kank1E9Q238 1360 aa17.04■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Usp47Q8BY87 1376 aa17.04■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Pnmal2G3X9N3 661 aa17.04■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Q8BT18 775 aa17.03■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Ccdc94Q9D6J3 314 aa17.03■□□□□ 0.32
Ddx42-201ENSMUST00000021046 Ppp2r3aB2RXC8 1150 aa17.02■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Rrp7aQ9D1C9 280 aaKnown RBP17.01■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Casq1O09165 405 aa17.01■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Znf330Q922H9 316 aa17.01■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Kif16bB1AVY7 1312 aa17.01■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Erich6D3Z6S9 713 aa17.01■□□□□ 0.31
Ddx42-201ENSMUST00000021046 RdxP26043 583 aaKnown RBP17■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Tspyl2Q7TQI8 677 aa17■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Taf3Q5HZG4 932 aa17■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Ripk4Q9ERK0 786 aa17■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Catsper2A2ARP9 588 aa16.99■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Stk11ipQ3TAA7 1072 aa16.99■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Pdcl2Q78Y63 240 aa16.98■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Serpina10Q8R121 448 aa16.98■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Gripap1Q8VD04 806 aa16.98■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Erbb3Q61526 1339 aa16.98■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Tpd52l1O54818 204 aa16.96■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Dhx29Q6PGC1 1365 aaKnown RBP16.96■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Safb2Q80YR5 991 aaKnown RBP16.96■□□□□ 0.31
Ddx42-201ENSMUST00000021046 Rock1P70335 1354 aa16.95■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Gzf1Q4VBD9 706 aa16.95■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Smarca2Q6DIC0 1577 aa16.95■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Kiaa1211Q5PR69 1207 aa16.94■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Golga2Q921M4 999 aa16.93■□□□□ 0.3
Ddx42-201ENSMUST00000021046 PtmsQ9D0J8 101 aaKnown RBP16.93■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Dhx57Q6P5D3 1388 aaKnown RBP16.93■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Ccdc30Q8BVF4 654 aa16.93■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Pank3Q8R2W9 370 aa16.93■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Inpp5dQ9ES52 1191 aa16.93■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Anapc15-psA0A140T8L6 141 aa16.92■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Wdr78E9PYY5 807 aa16.92■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Utp3Q9JI13 469 aaKnown RBP16.92■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Ccdc146E9Q9F7 977 aa16.92■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Terf2O35144 541 aa16.92■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Pank2Q3U4S0 443 aa16.92■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Kif4P33174 1231 aa16.91■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Cabp1Q9JLK7 227 aa16.91■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Cavin1O54724 392 aa16.91■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Fmn1Q05860 1466 aa16.91■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Dapk1Q80YE7 1442 aa16.9■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Plekhh1Q80TI1 1356 aa16.9■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Trim58Q5NCC9 485 aa16.9■□□□□ 0.3
Ddx42-201ENSMUST00000021046 Olfml1Q8BSH2 233 aa16.89■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Syce3B5KM66 88 aa16.89■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Arap1Q4LDD4 1452 aa16.89■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Ksr2Q3UVC0 959 aa16.89■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Frmd3Q8BHD4 595 aa16.89■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Pdlim2Q8R1G6 349 aa16.89■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Rcan3Q9JKK0 239 aa16.88■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Ralbp1Q62172 648 aa16.88■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Kdm2aP59997 1161 aa16.86■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Rbm27Q5SFM8 1060 aaKnown RBP16.86■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Dixdc1Q80Y83 711 aa16.86■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Ncoa1P70365 1447 aa16.86■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Erbb4Q61527 1308 aa16.86■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Ccdc173A0JLY1 547 aa16.86■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Gtpbp4Q99ME9 634 aaKnown RBP16.86■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Plekhg5Q66T02 1073 aa16.85■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Trak1Q6PD31 939 aa16.85■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Ecm2Q5FW85 670 aa16.85■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Stac3Q8BZ71 360 aa16.85■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Calcoco2A2A6M5 331 aa16.85■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Cecr2E9Q2Z1 1453 aa16.85■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Sass6Q80UK7 654 aa16.84■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Tmc1Q8R4P5 757 aa16.84■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Efcab5A0JP43 1406 aa16.84■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Sh3bp1P55194 680 aa16.84■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Atl3Q91YH5 541 aa16.84■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Kdm5dQ62240 1548 aa16.83■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Erich4Q3UNU4 136 aa16.83■□□□□ 0.29
Ddx42-201ENSMUST00000021046 Tmf1B9EKI3 1091 aa16.83■□□□□ 0.28
Ddx42-201ENSMUST00000021046 Cald1E9QA15 768 aaKnown RBP16.83■□□□□ 0.28
Ddx42-201ENSMUST00000021046 Zfp251Q6PCX8 632 aa16.83■□□□□ 0.28
Ddx42-201ENSMUST00000021046 Ncoa2Q61026 1462 aa16.82■□□□□ 0.28
Ddx42-201ENSMUST00000021046 Tmco5bQ80X59 307 aa16.82■□□□□ 0.28
Ddx42-201ENSMUST00000021046 Tfip11Q9ERA6 838 aaKnown RBP16.82■□□□□ 0.28
Ddx42-201ENSMUST00000021046 Cspp1B2RX88 1205 aa16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms