RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Filip1lQ6P6L0 1131 aa15.04■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Zrsr2Q62377 462 aaKnown RBP15.03■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Nap1l3Q794H2 544 aa15.03■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Brpf1B2RRD7 1212 aa15.03■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Plin1Q8CGN5 517 aa15.03■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Gtf3c5Q8R2T8 520 aa15.03■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Fam193aQ8CGI1 1231 aaKnown RBP15.02■□□□□ -0
Pcdhac1-201ENSMUST00000007584 Paxip1Q6NZQ4 1056 aa15.02□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Ccdc173A0JLY1 547 aa15.02□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Znhit6Q3UFB2 460 aaKnown RBP15.01□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Pkd2O35245 966 aa15.01□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Senp3Q9EP97 568 aaKnown RBP15.01□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Rabep1O35551 862 aa15.01□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Tmf1B9EKI3 1091 aa15.01□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 DmtnQ9WV69 405 aa15□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 A0A0U1RNP2 1173 aa15□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Def6Q8C2K1 630 aa14.99□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Znf526Q8BI66 675 aa14.99□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 NgefQ8CHT1 710 aa14.99□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Smg6P61406 1418 aaKnown RBP14.98□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 EzrP26040 586 aaKnown RBP14.98□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Rsph6aQ8CDR2 708 aa14.98□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Stk24Q99KH8 431 aa14.98□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Tpm1P58771 284 aa14.98□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Trim55G3X8Y1 545 aa14.98□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Ccar1Q8CH18 1146 aaKnown RBP14.97□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Pdia4P08003 638 aaKnown RBP14.97□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Gabpb2P81069 414 aa14.97□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Rufy1Q8BIJ7 712 aa14.96□□□□□ -0.01
Pcdhac1-201ENSMUST00000007584 Rrp7aQ9D1C9 280 aaKnown RBP14.96□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Rtf1A2AQ19 715 aaKnown RBP14.95□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Dcaf11Q91VU6 549 aa14.95□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Zfp777B9EKF4 885 aa14.95□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Mex3cQ05A36 652 aaKnown RBP14.95□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Mns1Q61884 491 aa14.95□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 AcrbpQ3V140 540 aa14.94□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Cgnl1Q6AW69 1298 aa14.94□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Hmgn5Q9JL35 406 aa14.94□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Bicd2Q921C5 820 aa14.94□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Ttll13A4Q9F6 804 aa14.93□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Eif4g2Q62448 906 aaKnown RBP14.93□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 NaspQ99MD9 773 aaKnown RBP14.93□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Mtus2Q3UHD3 1353 aa14.93□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Q3TQI7 289 aaKnown RBP14.92□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Cdkn1cP49919 348 aa14.92□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Znf710Q3U288 666 aa14.92□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Vgll3P85442 326 aa14.92□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Fez1Q8K0X8 392 aa14.91□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 KarsQ99MN1 595 aaKnown RBP14.91□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Ipo7Q9EPL8 1038 aaKnown RBP14.91□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Ccdc183A2AJB1 534 aa14.91□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 PogkQ80TC5 607 aa14.91□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Gps2Q921N8 327 aa14.91□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Tnnt1O88346 262 aa14.9□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Chmp4cQ9D7F7 232 aa14.9□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Kif16bB1AVY7 1312 aa14.9□□□□□ -0.02
Pcdhac1-201ENSMUST00000007584 Phactr2B1AVP0 632 aa14.89□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Cbx1P83917 185 aaKnown RBP14.88□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Ifit1bl1D3Z6F0 470 aa14.88□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Nol12Q8BG17 217 aa14.87□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Safb2Q80YR5 991 aaKnown RBP14.87□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Chaf1aQ9QWF0 911 aa14.87□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 KinQ8K339 391 aa14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Prkrip1Q9CWV6 186 aaKnown RBP14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Rsf1E9PWW9 1441 aaKnown RBP14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Gcom1E9PZ54 550 aa14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 MyzapQ3UIJ9 466 aa14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Pibf1E9Q6K3 756 aa14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Tnpo1Q8BFY9 898 aaKnown RBP14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Gtf2e1Q9D0D5 440 aa14.86□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Dusp27Q148W8 1138 aa14.85□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Dctn1O08788 1281 aa14.85□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Mphosph9A6H5Y1 991 aa14.84□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Tmco3Q8BH01 678 aa14.84□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 AppP12023 770 aa14.84□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Isy1Q69ZQ2 285 aaKnown RBP14.83□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Ccdc60Q8C4J0 545 aa14.83□□□□□ -0.03
Pcdhac1-201ENSMUST00000007584 Smc3Q9CW03 1217 aaKnown RBP14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Dnai2A2AC93 623 aa14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Fmnl2A2APV2 1086 aa14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 CastP51125 788 aa14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Kif20aP97329 887 aa14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Frmd3Q8BHD4 595 aa14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Paf1Q8K2T8 535 aa14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Noc3lQ8VI84 807 aaKnown RBP14.83□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Wdr78E9PYY5 807 aa14.82□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Mad1l1Q9WTX8 717 aaKnown RBP14.82□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Rec8Q8C5S7 591 aa14.82□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Map4P27546 1125 aaKnown RBP14.82□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Birc3O08863 600 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Hnrnpul1Q8VDM6 859 aaKnown RBP14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Ubl4bQ9CQ84 188 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Gm21969J3QJZ1 289 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Tpm4Q6IRU2 248 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Olfml1Q8BSH2 233 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Chmp3Q9CQ10 224 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Kif3cO35066 796 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Aebp1Q640N1 1128 aa14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Srek1Q8BZX4 494 aaKnown RBP14.81□□□□□ -0.04
Pcdhac1-201ENSMUST00000007584 Golga3P55937 1487 aa14.8□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms