RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C RNR2P09938 399 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C RPS18AP0CX55 146 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C RPS18BP0CX56 146 aaPredicted RBP2.64□□□□□ -1.99
RPC40YPR110C CHA1P25379 360 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C MXR2P25566 168 aa2.64□□□□□ -1.99
RPC40YPR110C ZUO1P32527 433 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C YKR015CP36111 568 aa2.64□□□□□ -1.99
RPC40YPR110C ECM8P38246 354 aa2.64□□□□□ -1.99
RPC40YPR110C IST2P38250 946 aa2.64□□□□□ -1.99
RPC40YPR110C ALP1P38971 573 aa2.64□□□□□ -1.99
RPC40YPR110C UTP18P40362 594 aaPredicted RBP2.64□□□□□ -1.99
RPC40YPR110C EGT2P42835 1041 aa2.64□□□□□ -1.99
RPC40YPR110C BIR1P47134 954 aa2.64□□□□□ -1.99
RPC40YPR110C TRF5P48561 642 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C SDT1P53078 280 aa2.64□□□□□ -1.99
RPC40YPR110C LST7P53237 242 aa2.64□□□□□ -1.99
RPC40YPR110C CRH1P53301 507 aa2.64□□□□□ -1.99
RPC40YPR110C SKI8Q02793 397 aaPredicted RBP2.64□□□□□ -1.99
RPC40YPR110C SMP3Q04174 516 aa2.64□□□□□ -1.99
RPC40YPR110C PAL1Q05518 499 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C SPH1Q06160 661 aa2.64□□□□□ -1.99
RPC40YPR110C YLH47Q06493 454 aa2.64□□□□□ -1.99
RPC40YPR110C ARR1Q06596 294 aa2.64□□□□□ -1.99
RPC40YPR110C YOL075CQ08234 1294 aa2.64□□□□□ -1.99
RPC40YPR110C RTC5Q12108 567 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C HIF1Q12373 385 aa2.64□□□□□ -1.99
RPC40YPR110C NAG1Q8TGN9 163 aa2.64□□□□□ -1.99
RPC40YPR110C DET1Q99288 334 aaKnown RBP2.64□□□□□ -1.99
RPC40YPR110C SRB8P25648 1427 aa2.63□□□□□ -1.99
RPC40YPR110C ARF2P19146 181 aaKnown RBP2.63□□□□□ -1.99
RPC40YPR110C NUP2P32499 720 aa2.63□□□□□ -1.99
RPC40YPR110C SPR1P32603 445 aa2.63□□□□□ -1.99
RPC40YPR110C YOX1P34161 385 aa2.63□□□□□ -1.99
RPC40YPR110C RTC2P38279 296 aa2.63□□□□□ -1.99
RPC40YPR110C YHR182WP38870 785 aa2.63□□□□□ -1.99
RPC40YPR110C YDR089WP38966 869 aa2.63□□□□□ -1.99
RPC40YPR110C PRP39P39682 629 aaKnown RBP2.63□□□□□ -1.99
RPC40YPR110C YER186CP40101 306 aa2.63□□□□□ -1.99
RPC40YPR110C YNL208WP40159 199 aaKnown RBP2.63□□□□□ -1.99
RPC40YPR110C PRE5P40302 234 aaKnown RBP2.63□□□□□ -1.99
RPC40YPR110C CTK3P46963 296 aaPredicted RBP2.63□□□□□ -1.99
RPC40YPR110C YGL114WP53134 725 aa2.63□□□□□ -1.99
RPC40YPR110C SHY1P53266 389 aa2.63□□□□□ -1.99
RPC40YPR110C REX2P54964 269 aaKnown RBP2.63□□□□□ -1.99
RPC40YPR110C YET2Q04210 160 aa2.63□□□□□ -1.99
RPC40YPR110C NAT4Q04751 285 aa2.63□□□□□ -1.99
RPC40YPR110C STE23Q06010 1027 aa2.63□□□□□ -1.99
RPC40YPR110C MCT1Q12283 360 aa2.63□□□□□ -1.99
RPC40YPR110C GLE1Q12315 538 aa2.63□□□□□ -1.99
RPC40YPR110C YDR262WQ12331 272 aa2.63□□□□□ -1.99
RPC40YPR110C MMS1Q06211 1407 aa2.62□□□□□ -1.99
RPC40YPR110C CDC37P06101 506 aaKnown RBP2.62□□□□□ -1.99
RPC40YPR110C HEM4P06174 275 aa2.62□□□□□ -1.99
RPC40YPR110C GAL3P13045 520 aa2.62□□□□□ -1.99
RPC40YPR110C AAT2P23542 418 aaKnown RBP2.62□□□□□ -1.99
RPC40YPR110C PET18P25362 215 aa2.62□□□□□ -1.99
RPC40YPR110C RPL16AP26784 199 aaKnown RBP2.62□□□□□ -1.99
RPC40YPR110C MRPL10P36520 322 aa2.62□□□□□ -1.99
RPC40YPR110C OM14P38325 134 aa2.62□□□□□ -1.99
RPC40YPR110C RRF1P38771 230 aa2.62□□□□□ -1.99
RPC40YPR110C ATG7P38862 630 aa2.62□□□□□ -1.99
RPC40YPR110C BAT1P38891 393 aaKnown RBP2.62□□□□□ -1.99
RPC40YPR110C RBG1P39729 369 aa2.62□□□□□ -1.99
RPC40YPR110C MIG3P39943 394 aa2.62□□□□□ -1.99
RPC40YPR110C OXA1P39952 402 aa2.62□□□□□ -1.99
RPC40YPR110C YNL146WP53906 100 aa2.62□□□□□ -1.99
RPC40YPR110C YLR152CP54072 576 aa2.62□□□□□ -1.99
RPC40YPR110C YHC1Q05900 231 aaKnown RBP2.62□□□□□ -1.99
RPC40YPR110C MHR1Q06630 226 aa2.62□□□□□ -1.99
RPC40YPR110C APC5Q08683 685 aa2.62□□□□□ -1.99
RPC40YPR110C UBA3Q99344 299 aa2.62□□□□□ -1.99
RPC40YPR110C SEC7P11075 2009 aaKnown RBP2.62□□□□□ -1.99
RPC40YPR110C GCN2P15442 1659 aa2.62□□□□□ -1.99
RPC40YPR110C YOR093CQ12275 1648 aa2.61□□□□□ -1.99
RPC40YPR110C YSP2Q06681 1438 aa2.61□□□□□ -1.99
RPC40YPR110C CBP2P03874 630 aaPredicted RBP2.61□□□□□ -1.99
RPC40YPR110C RAD1P06777 1100 aa2.61□□□□□ -1.99
RPC40YPR110C YLL053CP0CD98 152 aa2.61□□□□□ -1.99
RPC40YPR110C MSS116P15424 664 aaKnown RBP2.61□□□□□ -1.99
RPC40YPR110C UTR1P21373 530 aa2.61□□□□□ -1.99
RPC40YPR110C GIT1P25346 518 aa2.61□□□□□ -1.99
RPC40YPR110C DCC1P25559 380 aa2.61□□□□□ -1.99
RPC40YPR110C ERG9P29704 444 aa2.61□□□□□ -1.99
RPC40YPR110C MKK1P32490 508 aa2.61□□□□□ -1.99
RPC40YPR110C TOA1P32773 286 aa2.61□□□□□ -1.99
RPC40YPR110C PES4P39684 611 aa2.61□□□□□ -1.99
RPC40YPR110C SSO2P39926 295 aa2.61□□□□□ -1.99
RPC40YPR110C BTT1P40314 149 aaPredicted RBP2.61□□□□□ -1.99
RPC40YPR110C LOC1P43586 204 aaPredicted RBP2.61□□□□□ -1.99
RPC40YPR110C YGL039WP53183 348 aaKnown RBP2.61□□□□□ -1.99
RPC40YPR110C CWC22P53333 577 aaKnown RBP2.61□□□□□ -1.99
RPC40YPR110C MSC3Q05812 728 aa2.61□□□□□ -1.99
RPC40YPR110C SLM3Q12093 417 aa2.61□□□□□ -1.99
RPC40YPR110C YDL109CQ12103 647 aa2.61□□□□□ -1.99
RPC40YPR110C SFM1Q12314 213 aa2.61□□□□□ -1.99
RPC40YPR110C RGS2Q99188 309 aa2.61□□□□□ -1.99
RPC40YPR110C STE7P06784 515 aa2.6□□□□□ -1.99
RPC40YPR110C RPL23AP0CX41 137 aaKnown RBP2.6□□□□□ -1.99
RPC40YPR110C RPL23BP0CX42 137 aaKnown RBP2.6□□□□□ -1.99
RPC40YPR110C REV1P12689 985 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms