RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MUM3Q08750 479 aa2.09□□□□□ -2.07
VPS16YPL045W RAX1Q08760 435 aa2.09□□□□□ -2.07
VPS16YPL045W YRM1Q12340 786 aa2.09□□□□□ -2.07
VPS16YPL045W PRP46Q12417 451 aaPredicted RBP2.09□□□□□ -2.07
VPS16YPL045W DET1Q99288 334 aaKnown RBP2.09□□□□□ -2.07
VPS16YPL045W RAD9P14737 1309 aa2.09□□□□□ -2.07
VPS16YPL045W POM152P39685 1337 aa2.09□□□□□ -2.07
VPS16YPL045W TDH3P00359 332 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
VPS16YPL045W FRS2P15625 503 aaKnown RBP2.09□□□□□ -2.08
VPS16YPL045W GLN3P18494 730 aa2.09□□□□□ -2.08
VPS16YPL045W SLY1P22213 666 aa2.09□□□□□ -2.08
VPS16YPL045W YCP4P25349 247 aaKnown RBP2.09□□□□□ -2.08
VPS16YPL045W ARO4P32449 370 aaKnown RBP2.09□□□□□ -2.08
VPS16YPL045W DPH5P32469 300 aaPredicted RBP2.09□□□□□ -2.08
VPS16YPL045W MKK1P32490 508 aa2.09□□□□□ -2.08
VPS16YPL045W GEP4P38812 185 aa2.09□□□□□ -2.08
VPS16YPL045W YIR014WP40570 242 aa2.09□□□□□ -2.08
VPS16YPL045W SFH5P47008 294 aa2.09□□□□□ -2.08
VPS16YPL045W YJL118WP47022 219 aa2.09□□□□□ -2.08
VPS16YPL045W STP1Q00947 519 aa2.09□□□□□ -2.08
VPS16YPL045W SPP2Q02521 185 aa2.09□□□□□ -2.08
VPS16YPL045W PET117Q02771 107 aa2.09□□□□□ -2.08
VPS16YPL045W INP2Q03824 705 aa2.09□□□□□ -2.08
VPS16YPL045W UBX2Q04228 584 aa2.09□□□□□ -2.08
VPS16YPL045W BCH1Q05029 724 aa2.09□□□□□ -2.08
VPS16YPL045W GPN3Q06543 272 aa2.09□□□□□ -2.08
VPS16YPL045W SIA1Q12212 622 aa2.09□□□□□ -2.08
VPS16YPL045W CSR2Q12734 1121 aa2.09□□□□□ -2.08
VPS16YPL045W YRF1-3P0CX14 1859 aa2.09□□□□□ -2.08
VPS16YPL045W YRF1-7P0CX15 1859 aa2.09□□□□□ -2.08
VPS16YPL045W YRF1-6P53819 1859 aa2.09□□□□□ -2.08
VPS16YPL045W RAD7P06779 565 aa2.08□□□□□ -2.08
VPS16YPL045W PRS1P32895 427 aaKnown RBP2.08□□□□□ -2.08
VPS16YPL045W COS9P36034 407 aa2.08□□□□□ -2.08
VPS16YPL045W HIS2P38635 335 aa2.08□□□□□ -2.08
VPS16YPL045W RBG1P39729 369 aa2.08□□□□□ -2.08
VPS16YPL045W YCH1P42937 148 aa2.08□□□□□ -2.08
VPS16YPL045W YAR1P46683 200 aa2.08□□□□□ -2.08
VPS16YPL045W IKS1P47042 667 aa2.08□□□□□ -2.08
VPS16YPL045W PXR1P53335 271 aaPredicted RBP2.08□□□□□ -2.08
VPS16YPL045W BIO4P53630 237 aa2.08□□□□□ -2.08
VPS16YPL045W RPM2Q02773 1202 aa2.08□□□□□ -2.08
VPS16YPL045W PIR3Q03180 325 aa2.08□□□□□ -2.08
VPS16YPL045W YMR181CQ03231 154 aa2.08□□□□□ -2.08
VPS16YPL045W HER2Q03557 464 aa2.08□□□□□ -2.08
VPS16YPL045W CSM3Q04659 317 aa2.08□□□□□ -2.08
VPS16YPL045W COX20Q04935 205 aa2.08□□□□□ -2.08
VPS16YPL045W CTS2Q06350 511 aa2.08□□□□□ -2.08
VPS16YPL045W AHC1Q12433 566 aa2.08□□□□□ -2.08
VPS16YPL045W ADF1Q2V2Q1 113 aa2.08□□□□□ -2.08
VPS16YPL045W UBA3Q99344 299 aa2.08□□□□□ -2.08
VPS16YPL045W SAC3P46674 1301 aa2.08□□□□□ -2.08
VPS16YPL045W YLR419WQ06698 1435 aaKnown RBP2.08□□□□□ -2.08
VPS16YPL045W COX2P00410 251 aa2.08□□□□□ -2.08
VPS16YPL045W ARG80P07249 177 aa2.08□□□□□ -2.08
VPS16YPL045W PRB1P09232 635 aa2.08□□□□□ -2.08
VPS16YPL045W YFL068WP0CX99 160 aa2.08□□□□□ -2.08
VPS16YPL045W YLL066W-AP0CY00 160 aa2.08□□□□□ -2.08
VPS16YPL045W YLL067W-AP0CY01 160 aa2.08□□□□□ -2.08
VPS16YPL045W CDC23P16522 626 aa2.08□□□□□ -2.08
VPS16YPL045W CWP1P28319 239 aa2.08□□□□□ -2.08
VPS16YPL045W SUA5P32579 426 aa2.08□□□□□ -2.08
VPS16YPL045W TIR2P33890 251 aa2.08□□□□□ -2.08
VPS16YPL045W CHK1P38147 527 aa2.08□□□□□ -2.08
VPS16YPL045W YHK8P38776 514 aa2.08□□□□□ -2.08
VPS16YPL045W PRM9P39551 298 aa2.08□□□□□ -2.08
VPS16YPL045W YER085CP40058 173 aa2.08□□□□□ -2.08
VPS16YPL045W RTR1P40084 226 aaPredicted RBP2.08□□□□□ -2.08
VPS16YPL045W SLM1P40485 686 aa2.08□□□□□ -2.08
VPS16YPL045W BNA6P43619 295 aa2.08□□□□□ -2.08
VPS16YPL045W MKC7P53379 596 aa2.08□□□□□ -2.08
VPS16YPL045W PBP4Q07362 185 aaKnown RBP2.08□□□□□ -2.08
VPS16YPL045W BSC6Q08280 497 aa2.08□□□□□ -2.08
VPS16YPL045W YPL199CQ08954 240 aa2.08□□□□□ -2.08
VPS16YPL045W SAM4Q08985 325 aaKnown RBP2.08□□□□□ -2.08
VPS16YPL045W BTS1Q12051 335 aa2.08□□□□□ -2.08
VPS16YPL045W PSK1P31374 1356 aa2.08□□□□□ -2.08
VPS16YPL045W RIM15P43565 1770 aa2.07□□□□□ -2.08
VPS16YPL045W MRS3P10566 314 aa2.07□□□□□ -2.08
VPS16YPL045W ACB1P31787 87 aa2.07□□□□□ -2.08
VPS16YPL045W TMT1P32643 299 aa2.07□□□□□ -2.08
VPS16YPL045W SKG6P32900 734 aaPredicted RBP2.07□□□□□ -2.08
VPS16YPL045W PTR2P32901 601 aa2.07□□□□□ -2.08
VPS16YPL045W YKR015CP36111 568 aa2.07□□□□□ -2.08
VPS16YPL045W YBR137WP38276 179 aa2.07□□□□□ -2.08
VPS16YPL045W MMS21P38632 267 aa2.07□□□□□ -2.08
VPS16YPL045W JLP2P40206 208 aa2.07□□□□□ -2.08
VPS16YPL045W SHQ1P40486 507 aaPredicted RBP2.07□□□□□ -2.08
VPS16YPL045W MSS2P40990 351 aa2.07□□□□□ -2.08
VPS16YPL045W KEG1P43614 200 aa2.07□□□□□ -2.08
VPS16YPL045W COX16P47081 118 aa2.07□□□□□ -2.08
VPS16YPL045W OKP1P53298 406 aa2.07□□□□□ -2.08
VPS16YPL045W HXT11P54862 567 aa2.07□□□□□ -2.08
VPS16YPL045W SNX3Q08826 162 aaKnown RBP2.07□□□□□ -2.08
VPS16YPL045W SLF1Q12034 447 aaKnown RBP2.07□□□□□ -2.08
VPS16YPL045W YLR108CQ12259 485 aa2.07□□□□□ -2.08
VPS16YPL045W ATG31Q12421 196 aa2.07□□□□□ -2.08
VPS16YPL045W SET6Q12529 373 aa2.07□□□□□ -2.08
VPS16YPL045W APC1P53886 1748 aa2.07□□□□□ -2.08
VPS16YPL045W VPS3P23643 1011 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms