RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W TRM82Q03774 444 aa3.88□□□□□ -1.79
YJR028WYJR028W YMR111CQ04461 462 aaPredicted RBP3.88□□□□□ -1.79
YJR028WYJR028W CMS1Q07897 291 aaKnown RBP3.88□□□□□ -1.79
YJR028WYJR028W PLP2Q12017 286 aa3.88□□□□□ -1.79
YJR028WYJR028W YDL109CQ12103 647 aa3.88□□□□□ -1.79
YJR028WYJR028W RPN6Q12377 434 aa3.88□□□□□ -1.79
YJR028WYJR028W APC2Q12440 853 aa3.88□□□□□ -1.79
YJR028WYJR028W IZH2Q12442 317 aa3.88□□□□□ -1.79
YJR028WYJR028W HEM4P06174 275 aa3.87□□□□□ -1.79
YJR028WYJR028W RPL23AP0CX41 137 aaKnown RBP3.87□□□□□ -1.79
YJR028WYJR028W RPL23BP0CX42 137 aaKnown RBP3.87□□□□□ -1.79
YJR028WYJR028W RPS18AP0CX55 146 aaKnown RBP3.87□□□□□ -1.79
YJR028WYJR028W RPS18BP0CX56 146 aaPredicted RBP3.87□□□□□ -1.79
YJR028WYJR028W PET123P17558 318 aa3.87□□□□□ -1.79
YJR028WYJR028W RPL16AP26784 199 aaKnown RBP3.87□□□□□ -1.79
YJR028WYJR028W DEG1P31115 442 aaKnown RBP3.87□□□□□ -1.79
YJR028WYJR028W RPC25P35718 212 aa3.87□□□□□ -1.79
YJR028WYJR028W SNM1P40993 198 aa3.87□□□□□ -1.79
YJR028WYJR028W EGT2P42835 1041 aa3.87□□□□□ -1.79
YJR028WYJR028W YGR210CP42942 411 aa3.87□□□□□ -1.79
YJR028WYJR028W MND1P53102 219 aa3.87□□□□□ -1.79
YJR028WYJR028W SHY1P53266 389 aa3.87□□□□□ -1.79
YJR028WYJR028W OKP1P53298 406 aa3.87□□□□□ -1.79
YJR028WYJR028W BIO4P53630 237 aa3.87□□□□□ -1.79
YJR028WYJR028W REX2P54964 269 aaKnown RBP3.87□□□□□ -1.79
YJR028WYJR028W YTH1Q06102 208 aaPredicted RBP3.87□□□□□ -1.79
YJR028WYJR028W FRE8Q12209 686 aa3.87□□□□□ -1.79
YJR028WYJR028W JID1Q12350 301 aa3.87□□□□□ -1.79
YJR028WYJR028W HTZ1Q12692 134 aaKnown RBP3.87□□□□□ -1.79
YJR028WYJR028W NAM2P11325 894 aa3.86□□□□□ -1.79
YJR028WYJR028W HEM14P40012 539 aa3.86□□□□□ -1.79
YJR028WYJR028W YPI1P43587 155 aa3.86□□□□□ -1.79
YJR028WYJR028W CRH1P53301 507 aa3.86□□□□□ -1.79
YJR028WYJR028W YMR027WQ04371 470 aa3.86□□□□□ -1.79
YJR028WYJR028W KAP95Q06142 861 aaKnown RBP3.86□□□□□ -1.79
YJR028WYJR028W BCP1Q06338 283 aa3.86□□□□□ -1.79
YJR028WYJR028W IRC25Q07951 179 aa3.86□□□□□ -1.79
YJR028WYJR028W SSA3P09435 649 aaKnown RBP3.85□□□□□ -1.79
YJR028WYJR028W CBS2P14905 389 aa3.85□□□□□ -1.79
YJR028WYJR028W RPL5P26321 297 aaKnown RBP3.85□□□□□ -1.79
YJR028WYJR028W LSM12P38828 187 aaKnown RBP3.85□□□□□ -1.79
YJR028WYJR028W PEX18P38855 283 aa3.85□□□□□ -1.79
YJR028WYJR028W YFR057WP43625 151 aa3.85□□□□□ -1.79
YJR028WYJR028W SUR7P54003 302 aa3.85□□□□□ -1.79
YJR028WYJR028W YPR1Q12458 312 aa3.85□□□□□ -1.79
YJR028WYJR028W FMP16Q12497 93 aa3.85□□□□□ -1.79
YJR028WYJR028W ADH2P00331 348 aaKnown RBP3.84□□□□□ -1.79
YJR028WYJR028W RBK1P25332 333 aa3.84□□□□□ -1.79
YJR028WYJR028W PMT2P31382 759 aa3.84□□□□□ -1.79
YJR028WYJR028W ECT1P33412 323 aa3.84□□□□□ -1.79
YJR028WYJR028W DTR1P38125 572 aa3.84□□□□□ -1.79
YJR028WYJR028W DSE1P40077 573 aa3.84□□□□□ -1.79
YJR028WYJR028W YER186CP40101 306 aa3.84□□□□□ -1.79
YJR028WYJR028W BIR1P47134 954 aa3.84□□□□□ -1.79
YJR028WYJR028W YNL260CP53846 198 aa3.84□□□□□ -1.79
YJR028WYJR028W NAG1Q8TGN9 163 aa3.84□□□□□ -1.79
YJR028WYJR028W GPI12P23797 304 aa3.83□□□□□ -1.8
YJR028WYJR028W RPT5P33297 434 aaKnown RBP3.83□□□□□ -1.8
YJR028WYJR028W SWD3P38123 315 aa3.83□□□□□ -1.8
YJR028WYJR028W BAT1P38891 393 aaKnown RBP3.83□□□□□ -1.8
YJR028WYJR028W VAC7P53950 1165 aa3.83□□□□□ -1.8
YJR028WYJR028W SKI8Q02793 397 aaPredicted RBP3.83□□□□□ -1.8
YJR028WYJR028W DDC1Q08949 612 aa3.83□□□□□ -1.8
YJR028WYJR028W SAM4Q08985 325 aaKnown RBP3.83□□□□□ -1.8
YJR028WYJR028W ATP16Q12165 160 aa3.83□□□□□ -1.8
YJR028WYJR028W SFM1Q12314 213 aa3.83□□□□□ -1.8
YJR028WYJR028W STE2D6VTK4 431 aa3.82□□□□□ -1.8
YJR028WYJR028W REP1P03871 373 aa3.82□□□□□ -1.8
YJR028WYJR028W ISY1P21374 235 aaPredicted RBP3.82□□□□□ -1.8
YJR028WYJR028W MIR1P23641 311 aaKnown RBP3.82□□□□□ -1.8
YJR028WYJR028W YNL208WP40159 199 aaKnown RBP3.82□□□□□ -1.8
YJR028WYJR028W FMP33P46998 180 aa3.82□□□□□ -1.8
YJR028WYJR028W COX16P47081 118 aa3.82□□□□□ -1.8
YJR028WYJR028W YLR012CQ07927 99 aa3.82□□□□□ -1.8
YJR028WYJR028W TAF10Q12030 206 aa3.82□□□□□ -1.8
YJR028WYJR028W SIA1Q12212 622 aa3.82□□□□□ -1.8
YJR028WYJR028W FRS2P15625 503 aaKnown RBP3.81□□□□□ -1.8
YJR028WYJR028W GIT1P25346 518 aa3.81□□□□□ -1.8
YJR028WYJR028W PRR1P28708 518 aa3.81□□□□□ -1.8
YJR028WYJR028W AIM10P39965 576 aaKnown RBP3.81□□□□□ -1.8
YJR028WYJR028W SCC4P40090 624 aa3.81□□□□□ -1.8
YJR028WYJR028W SLM1P40485 686 aa3.81□□□□□ -1.8
YJR028WYJR028W PMT4P46971 762 aa3.81□□□□□ -1.8
YJR028WYJR028W SCS7Q03529 384 aa3.81□□□□□ -1.8
YJR028WYJR028W RRT8Q08219 342 aa3.81□□□□□ -1.8
YJR028WYJR028W RRG7Q08774 242 aaPredicted RBP3.81□□□□□ -1.8
YJR028WYJR028W SLF1Q12034 447 aaKnown RBP3.81□□□□□ -1.8
YJR028WYJR028W ITR2P30606 609 aa3.8□□□□□ -1.8
YJR028WYJR028W PET100P38958 111 aa3.8□□□□□ -1.8
YJR028WYJR028W BIO3P50277 480 aa3.8□□□□□ -1.8
YJR028WYJR028W CWC22P53333 577 aaKnown RBP3.8□□□□□ -1.8
YJR028WYJR028W YNL050CP53952 270 aa3.8□□□□□ -1.8
YJR028WYJR028W PRP38Q00723 242 aaPredicted RBP3.8□□□□□ -1.8
YJR028WYJR028W YPL080CQ02826 108 aa3.8□□□□□ -1.8
YJR028WYJR028W YET2Q04210 160 aa3.8□□□□□ -1.8
YJR028WYJR028W RDL2Q08742 149 aaKnown RBP3.8□□□□□ -1.8
YJR028WYJR028W APC9Q12107 265 aa3.8□□□□□ -1.8
YJR028WYJR028W HRT3Q12347 344 aa3.8□□□□□ -1.8
YJR028WYJR028W TDH1P00360 332 aaKnown RBP3.79□□□□□ -1.8
YJR028WYJR028W RPS14AP06367 137 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms