RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W YDL012CQ12489 107 aa1.9□□□□□ -2.11
MSL1YIR009W YCR024C-BQ3E7Z8 88 aa1.9□□□□□ -2.11
MSL1YIR009W UFD4P33202 1483 aa1.89□□□□□ -2.11
MSL1YIR009W RAD1P06777 1100 aa1.89□□□□□ -2.11
MSL1YIR009W NAM2P11325 894 aa1.89□□□□□ -2.11
MSL1YIR009W ARF2P19146 181 aaKnown RBP1.89□□□□□ -2.11
MSL1YIR009W MRPL8P22353 238 aa1.89□□□□□ -2.11
MSL1YIR009W GPI12P23797 304 aa1.89□□□□□ -2.11
MSL1YIR009W MEK1P24719 497 aaPredicted RBP1.89□□□□□ -2.11
MSL1YIR009W VMA5P31412 392 aaKnown RBP1.89□□□□□ -2.11
MSL1YIR009W TOA2P32774 122 aa1.89□□□□□ -2.11
MSL1YIR009W ECT1P33412 323 aa1.89□□□□□ -2.11
MSL1YIR009W RPC25P35718 212 aa1.89□□□□□ -2.11
MSL1YIR009W EBP2P36049 427 aaKnown RBP1.89□□□□□ -2.11
MSL1YIR009W YKL162CP36052 402 aa1.89□□□□□ -2.11
MSL1YIR009W SBE22P38814 852 aa1.89□□□□□ -2.11
MSL1YIR009W PEX18P38855 283 aa1.89□□□□□ -2.11
MSL1YIR009W COX14P39103 70 aa1.89□□□□□ -2.11
MSL1YIR009W FHL1P39521 936 aa1.89□□□□□ -2.11
MSL1YIR009W RBG1P39729 369 aa1.89□□□□□ -2.11
MSL1YIR009W JLP2P40206 208 aa1.89□□□□□ -2.11
MSL1YIR009W GTO1P48239 356 aa1.89□□□□□ -2.11
MSL1YIR009W MRM2P53123 320 aa1.89□□□□□ -2.11
MSL1YIR009W LST7P53237 242 aa1.89□□□□□ -2.11
MSL1YIR009W PBP4Q07362 185 aaKnown RBP1.89□□□□□ -2.11
MSL1YIR009W TSR1Q07381 788 aaKnown RBP1.89□□□□□ -2.11
MSL1YIR009W NDE2Q07500 545 aa1.89□□□□□ -2.11
MSL1YIR009W YLL007CQ07799 665 aa1.89□□□□□ -2.11
MSL1YIR009W RAX1Q08760 435 aa1.89□□□□□ -2.11
MSL1YIR009W EAF3Q12432 401 aa1.89□□□□□ -2.11
MSL1YIR009W FMP16Q12497 93 aa1.89□□□□□ -2.11
MSL1YIR009W HAP1P0CE41 1502 aa1.89□□□□□ -2.11
MSL1YIR009W DNF3Q12674 1656 aa1.88□□□□□ -2.11
MSL1YIR009W TDH1P00360 332 aaKnown RBP1.88□□□□□ -2.11
MSL1YIR009W TRP1P00912 224 aa1.88□□□□□ -2.11
MSL1YIR009W PAB1P04147 577 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11 RIP-Chip
MSL1YIR009W SSA3P09435 649 aaKnown RBP1.88□□□□□ -2.11
MSL1YIR009W CDC42P19073 191 aa1.88□□□□□ -2.11
MSL1YIR009W RVS161P25343 265 aaKnown RBP1.88□□□□□ -2.11
MSL1YIR009W SPS22P25380 463 aa1.88□□□□□ -2.11
MSL1YIR009W DPH5P32469 300 aaPredicted RBP1.88□□□□□ -2.11
MSL1YIR009W MKK1P32490 508 aa1.88□□□□□ -2.11
MSL1YIR009W VAM7P32912 316 aa1.88□□□□□ -2.11
MSL1YIR009W SDH3P33421 198 aa1.88□□□□□ -2.11
MSL1YIR009W TPO5P36029 618 aa1.88□□□□□ -2.11
MSL1YIR009W MIX23P38162 196 aa1.88□□□□□ -2.11
MSL1YIR009W YPT35P38815 214 aaKnown RBP1.88□□□□□ -2.11
MSL1YIR009W SMC2P38989 1170 aaKnown RBP1.88□□□□□ -2.11
MSL1YIR009W AIM24P47127 394 aa1.88□□□□□ -2.11
MSL1YIR009W YGR266WP53326 701 aa1.88□□□□□ -2.11
MSL1YIR009W PXR1P53335 271 aaPredicted RBP1.88□□□□□ -2.11
MSL1YIR009W YPL080CQ02826 108 aa1.88□□□□□ -2.11
MSL1YIR009W YMR010WQ03687 405 aa1.88□□□□□ -2.11
MSL1YIR009W RVB1Q03940 463 aaKnown RBP1.88□□□□□ -2.11
MSL1YIR009W ERV41Q04651 352 aa1.88□□□□□ -2.11
MSL1YIR009W SLF1Q12034 447 aaKnown RBP1.88□□□□□ -2.11
MSL1YIR009W YLR108CQ12259 485 aa1.88□□□□□ -2.11
MSL1YIR009W ERP3Q12403 225 aa1.88□□□□□ -2.11
MSL1YIR009W NUP159P40477 1460 aa1.88□□□□□ -2.11
MSL1YIR009W YOR1P53049 1477 aa1.88□□□□□ -2.11
MSL1YIR009W PIS1P06197 220 aaKnown RBP1.87□□□□□ -2.11
MSL1YIR009W RPS14AP06367 137 aaKnown RBP1.87□□□□□ -2.11
MSL1YIR009W FAR1P21268 830 aa1.87□□□□□ -2.11
MSL1YIR009W POP5P28005 173 aa1.87□□□□□ -2.11
MSL1YIR009W PHA2P32452 334 aa1.87□□□□□ -2.11
MSL1YIR009W DTR1P38125 572 aa1.87□□□□□ -2.11
MSL1YIR009W IST2P38250 946 aa1.87□□□□□ -2.11
MSL1YIR009W MMS21P38632 267 aa1.87□□□□□ -2.11
MSL1YIR009W SMF2P38778 549 aa1.87□□□□□ -2.11
MSL1YIR009W RPS14BP39516 138 aaKnown RBP1.87□□□□□ -2.11
MSL1YIR009W YMR134WP40207 237 aa1.87□□□□□ -2.11
MSL1YIR009W PRM5P40476 318 aa1.87□□□□□ -2.11
MSL1YIR009W DFG10P40526 253 aa1.87□□□□□ -2.11
MSL1YIR009W HAC1P41546 238 aa1.87□□□□□ -2.11
MSL1YIR009W KEG1P43614 200 aa1.87□□□□□ -2.11
MSL1YIR009W CTK3P46963 296 aaPredicted RBP1.87□□□□□ -2.11
MSL1YIR009W YJL118WP47022 219 aa1.87□□□□□ -2.11
MSL1YIR009W TRF5P48561 642 aaKnown RBP1.87□□□□□ -2.11
MSL1YIR009W TAF6P53040 516 aa1.87□□□□□ -2.11
MSL1YIR009W SHY1P53266 389 aa1.87□□□□□ -2.11
MSL1YIR009W COS1P53822 381 aa1.87□□□□□ -2.11
MSL1YIR009W YNL260CP53846 198 aa1.87□□□□□ -2.11
MSL1YIR009W IBD2P53892 351 aa1.87□□□□□ -2.11
MSL1YIR009W TIM11P81449 96 aaPredicted RBP1.87□□□□□ -2.11
MSL1YIR009W TDA1Q03533 586 aa1.87□□□□□ -2.11
MSL1YIR009W TSA2Q04120 196 aa1.87□□□□□ -2.11
MSL1YIR009W YMR027WQ04371 470 aa1.87□□□□□ -2.11
MSL1YIR009W APC4Q04601 652 aa1.87□□□□□ -2.11
MSL1YIR009W CSM3Q04659 317 aa1.87□□□□□ -2.11
MSL1YIR009W MDM36Q06820 579 aa1.87□□□□□ -2.11
MSL1YIR009W TY3A-GQ12173 290 aa1.87□□□□□ -2.11
MSL1YIR009W HTZ1Q12692 134 aaKnown RBP1.87□□□□□ -2.11
MSL1YIR009W TY3A-IQ99219 290 aa1.87□□□□□ -2.11
MSL1YIR009W ESP1Q03018 1630 aa1.87□□□□□ -2.11
MSL1YIR009W SKI3P17883 1432 aaKnown RBP1.86□□□□□ -2.11
MSL1YIR009W CYC3P06182 269 aa1.86□□□□□ -2.11
MSL1YIR009W ITR2P30606 609 aa1.86□□□□□ -2.11
MSL1YIR009W IME2P32581 645 aa1.86□□□□□ -2.11
MSL1YIR009W ZRT1P32804 376 aa1.86□□□□□ -2.11
MSL1YIR009W RAD5P32849 1169 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 92.6 ms