RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W RPC40P07703 335 aaKnown RBP2.17□□□□□ -2.06
SSF1YHR066W PPQ1P32945 549 aa2.17□□□□□ -2.06
SSF1YHR066W GPI18P38211 433 aa2.17□□□□□ -2.06
SSF1YHR066W RTT105P40063 208 aa2.17□□□□□ -2.06
SSF1YHR066W EPL1P43572 832 aa2.17□□□□□ -2.06
SSF1YHR066W IGD1P43598 195 aa2.17□□□□□ -2.06
SSF1YHR066W ASN2P49090 572 aaKnown RBP2.17□□□□□ -2.06
SSF1YHR066W CUE3P53137 624 aaKnown RBP2.17□□□□□ -2.06
SSF1YHR066W HST1P53685 503 aa2.17□□□□□ -2.06
SSF1YHR066W RTC5Q12108 567 aaKnown RBP2.17□□□□□ -2.06
SSF1YHR066W MDY2Q12285 212 aa2.17□□□□□ -2.06
SSF1YHR066W PCL9Q12477 304 aa2.17□□□□□ -2.06
SSF1YHR066W ARO1P08566 1588 aaKnown RBP2.17□□□□□ -2.06
SSF1YHR066W PDR10P51533 1564 aa2.17□□□□□ -2.06
SSF1YHR066W VTH1P40438 1549 aa2.16□□□□□ -2.06
SSF1YHR066W VTH2P40890 1549 aa2.16□□□□□ -2.06
SSF1YHR066W DBP3P20447 523 aaKnown RBP2.16□□□□□ -2.06
SSF1YHR066W FAA1P30624 700 aaKnown RBP2.16□□□□□ -2.06
SSF1YHR066W DEP1P31385 405 aa2.16□□□□□ -2.06
SSF1YHR066W RIB7P33312 244 aa2.16□□□□□ -2.06
SSF1YHR066W SRB2P34162 210 aa2.16□□□□□ -2.06
SSF1YHR066W MRPL27P36526 146 aaPredicted RBP2.16□□□□□ -2.06
SSF1YHR066W KAP104P38217 918 aaKnown RBP2.16□□□□□ -2.06
SSF1YHR066W YIL089WP40500 205 aa2.16□□□□□ -2.06
SSF1YHR066W SEC27P41811 889 aaKnown RBP2.16□□□□□ -2.06
SSF1YHR066W CIN2P46670 268 aa2.16□□□□□ -2.06
SSF1YHR066W CTK3P46963 296 aaPredicted RBP2.16□□□□□ -2.06
SSF1YHR066W EFM3P47163 339 aa2.16□□□□□ -2.06
SSF1YHR066W MKC7P53379 596 aa2.16□□□□□ -2.06
SSF1YHR066W YNL143CP53908 130 aa2.16□□□□□ -2.06
SSF1YHR066W REX2P54964 269 aaKnown RBP2.16□□□□□ -2.06
SSF1YHR066W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SSF1YHR066W VHS1Q03785 461 aa2.16□□□□□ -2.06
SSF1YHR066W YFH1Q07540 174 aa2.16□□□□□ -2.06
SSF1YHR066W GAT3Q07928 141 aa2.16□□□□□ -2.06
SSF1YHR066W YDR061WQ12298 539 aa2.16□□□□□ -2.06
SSF1YHR066W TFB5Q3E7C1 72 aaPredicted RBP2.16□□□□□ -2.06
SSF1YHR066W MEX67Q99257 599 aaKnown RBP2.16□□□□□ -2.06
SSF1YHR066W RPS18AP0CX55 146 aaKnown RBP2.15□□□□□ -2.07
SSF1YHR066W RPS18BP0CX56 146 aaPredicted RBP2.15□□□□□ -2.07
SSF1YHR066W TAL1P15019 335 aaKnown RBP2.15□□□□□ -2.07
SSF1YHR066W OM45P16547 393 aa2.15□□□□□ -2.07
SSF1YHR066W UBA1P22515 1024 aaKnown RBP2.15□□□□□ -2.07
SSF1YHR066W CMK2P22517 447 aa2.15□□□□□ -2.07
SSF1YHR066W GIT1P25346 518 aa2.15□□□□□ -2.07
SSF1YHR066W DAL80P26343 269 aa2.15□□□□□ -2.07
SSF1YHR066W YDR089WP38966 869 aa2.15□□□□□ -2.07
SSF1YHR066W AIP1P46680 615 aaKnown RBP2.15□□□□□ -2.07
SSF1YHR066W SEH1P53011 349 aaKnown RBP2.15□□□□□ -2.07
SSF1YHR066W YGL262WP53054 175 aa2.15□□□□□ -2.07
SSF1YHR066W AQR1P53943 586 aa2.15□□□□□ -2.07
SSF1YHR066W UTP6Q02354 440 aaKnown RBP2.15□□□□□ -2.07
SSF1YHR066W SFG1Q12507 346 aa2.15□□□□□ -2.07
SSF1YHR066W NBL1Q3E7Y6 73 aa2.15□□□□□ -2.07
SSF1YHR066W GDB1Q06625 1536 aa2.15□□□□□ -2.07
SSF1YHR066W MRPS9P38120 278 aa2.14□□□□□ -2.07
SSF1YHR066W LSM12P38828 187 aaKnown RBP2.14□□□□□ -2.07
SSF1YHR066W RPA34P47006 233 aaPredicted RBP2.14□□□□□ -2.07
SSF1YHR066W TRF5P48561 642 aaKnown RBP2.14□□□□□ -2.07
SSF1YHR066W VAC7P53950 1165 aa2.14□□□□□ -2.07
SSF1YHR066W PRP38Q00723 242 aaPredicted RBP2.14□□□□□ -2.07
SSF1YHR066W TPS1Q00764 495 aaKnown RBP2.14□□□□□ -2.07
SSF1YHR066W RNY1Q02933 434 aaKnown RBP2.14□□□□□ -2.07
SSF1YHR066W ENT5Q03769 411 aaKnown RBP2.14□□□□□ -2.07
SSF1YHR066W GRX3Q03835 250 aa2.14□□□□□ -2.07
SSF1YHR066W MSC3Q05812 728 aa2.14□□□□□ -2.07
SSF1YHR066W YOR376WQ08900 122 aa2.14□□□□□ -2.07
SSF1YHR066W YPQ1Q12010 308 aa2.14□□□□□ -2.07
SSF1YHR066W FOL3Q12676 427 aaPredicted RBP2.14□□□□□ -2.07
SSF1YHR066W SRN2Q99176 213 aa2.14□□□□□ -2.07
SSF1YHR066W STE3P06783 470 aa2.13□□□□□ -2.07
SSF1YHR066W SCH9P11792 824 aaKnown RBP2.13□□□□□ -2.07
SSF1YHR066W RDS1P25611 832 aa2.13□□□□□ -2.07
SSF1YHR066W SSE1P32589 693 aaKnown RBP2.13□□□□□ -2.07
SSF1YHR066W ECT1P33412 323 aa2.13□□□□□ -2.07
SSF1YHR066W MRPL40P36534 297 aa2.13□□□□□ -2.07
SSF1YHR066W VHT1P53241 593 aa2.13□□□□□ -2.07
SSF1YHR066W APJ1P53940 528 aa2.13□□□□□ -2.07
SSF1YHR066W ABZ2Q03266 374 aa2.13□□□□□ -2.07
SSF1YHR066W VPS20Q04272 221 aa2.13□□□□□ -2.07
SSF1YHR066W PIN3Q06449 215 aa2.13□□□□□ -2.07
SSF1YHR066W YPR078CQ06813 372 aa2.13□□□□□ -2.07
SSF1YHR066W SPP41P38904 1435 aa2.13□□□□□ -2.07
SSF1YHR066W PDR12Q02785 1511 aa2.13□□□□□ -2.07
SSF1YHR066W YRF1-2P40105 1681 aa2.13□□□□□ -2.07
SSF1YHR066W YBT1P32386 1661 aa2.12□□□□□ -2.07
SSF1YHR066W MYO4P32492 1471 aa2.12□□□□□ -2.07
SSF1YHR066W SNT2P53127 1403 aa2.12□□□□□ -2.07
SSF1YHR066W STE7P06784 515 aa2.12□□□□□ -2.07
SSF1YHR066W GRR1P24814 1151 aa2.12□□□□□ -2.07
SSF1YHR066W LIN1P38852 340 aaPredicted RBP2.12□□□□□ -2.07
SSF1YHR066W RPN14P53196 417 aa2.12□□□□□ -2.07
SSF1YHR066W ARP5P53946 755 aa2.12□□□□□ -2.07
SSF1YHR066W TIM11P81449 96 aaPredicted RBP2.12□□□□□ -2.07
SSF1YHR066W ECM11Q04110 302 aa2.12□□□□□ -2.07
SSF1YHR066W YMR111CQ04461 462 aaPredicted RBP2.12□□□□□ -2.07
SSF1YHR066W YLR177WQ06251 628 aa2.12□□□□□ -2.07
SSF1YHR066W YLH47Q06493 454 aa2.12□□□□□ -2.07
SSF1YHR066W SFM1Q12314 213 aa2.12□□□□□ -2.07
SSF1YHR066W IQG1Q12280 1495 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms