RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C FSH3Q99369 266 aa2.39□□□□□ -2.03
PGD1YGL025C FUS3P16892 353 aaKnown RBP2.38□□□□□ -2.03
PGD1YGL025C GRR1P24814 1151 aa2.38□□□□□ -2.03
PGD1YGL025C FAA1P30624 700 aaKnown RBP2.38□□□□□ -2.03
PGD1YGL025C AGA2P32781 87 aa2.38□□□□□ -2.03
PGD1YGL025C PEX5P35056 612 aa2.38□□□□□ -2.03
PGD1YGL025C FRM2P37261 193 aa2.38□□□□□ -2.03
PGD1YGL025C YPT35P38815 214 aaKnown RBP2.38□□□□□ -2.03
PGD1YGL025C ATG7P38862 630 aa2.38□□□□□ -2.03
PGD1YGL025C MOB2P43563 287 aa2.38□□□□□ -2.03
PGD1YGL025C LST7P53237 242 aa2.38□□□□□ -2.03
PGD1YGL025C IGO1P53897 168 aa2.38□□□□□ -2.03
PGD1YGL025C UTP6Q02354 440 aaKnown RBP2.38□□□□□ -2.03
PGD1YGL025C API2Q04413 109 aa2.38□□□□□ -2.03
PGD1YGL025C RPL6BP05739 176 aaKnown RBP2.37□□□□□ -2.03
PGD1YGL025C IME2P32581 645 aa2.37□□□□□ -2.03
PGD1YGL025C TRR2P38816 342 aa2.37□□□□□ -2.03
PGD1YGL025C GGC1P38988 300 aa2.37□□□□□ -2.03
PGD1YGL025C JEM1P40358 645 aa2.37□□□□□ -2.03
PGD1YGL025C SNL1P40548 159 aa2.37□□□□□ -2.03
PGD1YGL025C CPR7P47103 393 aa2.37□□□□□ -2.03
PGD1YGL025C YNR068CP53754 272 aa2.37□□□□□ -2.03
PGD1YGL025C RPL6AQ02326 176 aaKnown RBP2.37□□□□□ -2.03
PGD1YGL025C YOR012WQ12351 137 aa2.37□□□□□ -2.03
PGD1YGL025C STE2D6VTK4 431 aa2.36□□□□□ -2.03
PGD1YGL025C CKI1P20485 582 aa2.36□□□□□ -2.03
PGD1YGL025C UBA1P22515 1024 aaKnown RBP2.36□□□□□ -2.03
PGD1YGL025C ZIP1P31111 875 aa2.36□□□□□ -2.03
PGD1YGL025C TIP20P33891 701 aa2.36□□□□□ -2.03
PGD1YGL025C ZRG17P53735 605 aa2.36□□□□□ -2.03
PGD1YGL025C MRX8Q05473 314 aa2.36□□□□□ -2.03
PGD1YGL025C YOL029CQ08187 201 aa2.36□□□□□ -2.03
PGD1YGL025C ALE1Q08548 619 aa2.36□□□□□ -2.03
PGD1YGL025C BGL2P15703 313 aaKnown RBP2.35□□□□□ -2.03
PGD1YGL025C IST2P38250 946 aa2.35□□□□□ -2.03
PGD1YGL025C UFE1P41834 346 aa2.35□□□□□ -2.03
PGD1YGL025C LSG1P53145 640 aaKnown RBP2.35□□□□□ -2.03
PGD1YGL025C MPS2P53159 387 aa2.35□□□□□ -2.03
PGD1YGL025C SMP3Q04174 516 aa2.35□□□□□ -2.03
PGD1YGL025C YDR018CQ12185 396 aa2.35□□□□□ -2.03
PGD1YGL025C SKS1Q12505 502 aa2.35□□□□□ -2.03
PGD1YGL025C TFB5Q3E7C1 72 aaPredicted RBP2.35□□□□□ -2.03
PGD1YGL025C COX10P21592 462 aa2.34□□□□□ -2.03
PGD1YGL025C MKK1P32490 508 aa2.34□□□□□ -2.03
PGD1YGL025C RAD23P32628 398 aaKnown RBP2.34□□□□□ -2.03
PGD1YGL025C MRPS5P33759 307 aa2.34□□□□□ -2.03
PGD1YGL025C ADH5P38113 351 aaKnown RBP2.34□□□□□ -2.03
PGD1YGL025C GDT1P38301 280 aaPredicted RBP2.34□□□□□ -2.03
PGD1YGL025C RBG1P39729 369 aa2.34□□□□□ -2.03
PGD1YGL025C YIR035CP40579 254 aa2.34□□□□□ -2.03
PGD1YGL025C YCH1P42937 148 aa2.34□□□□□ -2.03
PGD1YGL025C INP2Q03824 705 aa2.34□□□□□ -2.03
PGD1YGL025C MMT2Q08970 484 aa2.34□□□□□ -2.03
PGD1YGL025C FLO11P08640 1367 aa2.34□□□□□ -2.04
PGD1YGL025C THR4P16120 514 aaKnown RBP2.33□□□□□ -2.04
PGD1YGL025C MXR2P25566 168 aa2.33□□□□□ -2.04
PGD1YGL025C SKG6P32900 734 aaPredicted RBP2.33□□□□□ -2.04
PGD1YGL025C PTK1P36002 662 aaPredicted RBP2.33□□□□□ -2.04
PGD1YGL025C RXT2P38255 430 aa2.33□□□□□ -2.04
PGD1YGL025C RPN14P53196 417 aa2.33□□□□□ -2.04
PGD1YGL025C CSM3Q04659 317 aa2.33□□□□□ -2.04
PGD1YGL025C NAT4Q04751 285 aa2.33□□□□□ -2.04
PGD1YGL025C TAF10Q12030 206 aa2.33□□□□□ -2.04
PGD1YGL025C RPN6Q12377 434 aa2.33□□□□□ -2.04
PGD1YGL025C UTR1P21373 530 aa2.32□□□□□ -2.04
PGD1YGL025C RDS1P25611 832 aa2.32□□□□□ -2.04
PGD1YGL025C URA10P30402 227 aa2.32□□□□□ -2.04
PGD1YGL025C AST1P35183 429 aa2.32□□□□□ -2.04
PGD1YGL025C TAE1P38340 232 aa2.32□□□□□ -2.04
PGD1YGL025C COS4P43542 379 aa2.32□□□□□ -2.04
PGD1YGL025C NAS6P50086 228 aa2.32□□□□□ -2.04
PGD1YGL025C APC4Q04601 652 aa2.32□□□□□ -2.04
PGD1YGL025C APC2Q12440 853 aa2.32□□□□□ -2.04
PGD1YGL025C FRE6Q12473 712 aa2.32□□□□□ -2.04
PGD1YGL025C MAS1P10507 462 aa2.31□□□□□ -2.04
PGD1YGL025C ARF2P19146 181 aaKnown RBP2.31□□□□□ -2.04
PGD1YGL025C CKA2P19454 339 aa2.31□□□□□ -2.04
PGD1YGL025C SRB2P34162 210 aa2.31□□□□□ -2.04
PGD1YGL025C DAD2P36162 133 aa2.31□□□□□ -2.04
PGD1YGL025C YHR122WP38829 231 aa2.31□□□□□ -2.04
PGD1YGL025C SPO73P40031 143 aa2.31□□□□□ -2.04
PGD1YGL025C YFR018CP43599 363 aa2.31□□□□□ -2.04
PGD1YGL025C YHC3P47040 408 aa2.31□□□□□ -2.04
PGD1YGL025C PRM1P53835 661 aa2.31□□□□□ -2.04
PGD1YGL025C FAR10Q06001 478 aa2.31□□□□□ -2.04
PGD1YGL025C APC5Q08683 685 aa2.31□□□□□ -2.04
PGD1YGL025C RPN8Q08723 338 aaKnown RBP2.31□□□□□ -2.04
PGD1YGL025C YDL211CQ12121 372 aa2.31□□□□□ -2.04
PGD1YGL025C RAD1P06777 1100 aa2.3□□□□□ -2.04
PGD1YGL025C SAG1P20840 650 aa2.3□□□□□ -2.04
PGD1YGL025C HMX1P32339 317 aa2.3□□□□□ -2.04
PGD1YGL025C CBF5P33322 483 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
PGD1YGL025C EFM1P38732 585 aa2.3□□□□□ -2.04
PGD1YGL025C BDH1P39714 382 aa2.3□□□□□ -2.04
PGD1YGL025C YNL320WP42840 284 aa2.3□□□□□ -2.04
PGD1YGL025C YNL143CP53908 130 aa2.3□□□□□ -2.04
PGD1YGL025C YMR310CQ04867 317 aaPredicted RBP2.3□□□□□ -2.04
PGD1YGL025C SAL1D6W196 494 aa2.29□□□□□ -2.04
PGD1YGL025C PCH2P38126 564 aa2.29□□□□□ -2.04
PGD1YGL025C RRG9P40156 214 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms